EY691970

Overview
NameEY691970
Unique NameEY691970
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_USTMA (Histone H2A OS=Ustilago maydis GN=HTA1 PE=3 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.975e-18
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 1
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRS++AGLQFPVGR+HRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   20 SRSAKAGLQFPVGRIHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEEL 97          
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A4_VOLCA (Histone H2A-IV OS=Volvox carteri PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.975e-18
Identity = 51/80 (63.75%), Postives = 58/80 (72.50%), Query Frame = 1
Query:  154 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            VSRSS+AGLQFPVGR+ R LK+              Y AA+LEYLTAEVLELAGNA++D K  RI PRH+QLAIR DEEL
Sbjct:   15 VSRSSKAGLQFPVGRIARYLKKGKYAERIGAGAPV-YLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEEL 93          
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AL_STRPU (Late histone H2A.L3 OS=Strongylocentrotus purpuratus PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.369e-18
Identity = 49/79 (62.03%), Postives = 57/79 (72.15%), Query Frame = 1
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRS+RAGLQFPVGRVHR L++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLA+R DEEL
Sbjct:   17 SRSARAGLQFPVGRVHRFLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAVRNDEEL 94          
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A3_STRPU (Histone H2A-beta, sperm (Fragment) OS=Strongylocentrotus purpuratus PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.369e-18
Identity = 50/78 (64.10%), Postives = 56/78 (71.79%), Query Frame = 1
Query:  160 RSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            RSSRAGLQFPVGRVHR L++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:    9 RSSRAGLQFPVGRVHRFLRKGNYANRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 85          
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_PODAN (Histone H2A OS=Podospora anserina GN=HTA1 PE=3 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 96          
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_PHANO (Histone H2A OS=Phaeosphaeria nodorum GN=HTA1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 96          
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_NEUCR (Histone H2A OS=Neurospora crassa GN=hh2a PE=3 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 96          
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_NEOFI (Histone H2A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hta1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 95          
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_MAGGR (Histone H2A OS=Magnaporthe grisea GN=HTA1 PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 96          
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_GIBZE (Histone H2A OS=Gibberella zeae GN=HTA1 PE=3 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 96          
The following BLAST results are available for this feature:
BLAST of EY691970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 233
Match NameE-valueIdentityDescription
H2A_USTMA1.975e-1862.03Histone H2A OS=Ustilago maydis GN=HTA1 PE=3 SV=3[more]
H2A4_VOLCA1.975e-1863.75Histone H2A-IV OS=Volvox carteri PE=3 SV=1[more]
H2AL_STRPU3.369e-1862.03Late histone H2A.L3 OS=Strongylocentrotus purpurat... [more]
H2A3_STRPU3.369e-1864.10Histone H2A-beta, sperm (Fragment) OS=Strongylocen... [more]
H2A_PODAN4.400e-1863.29Histone H2A OS=Podospora anserina GN=HTA1 PE=3 SV=... [more]
H2A_PHANO4.400e-1863.29Histone H2A OS=Phaeosphaeria nodorum GN=HTA1 PE=3 ... [more]
H2A_NEUCR4.400e-1863.29Histone H2A OS=Neurospora crassa GN=hh2a PE=3 SV=3[more]
H2A_NEOFI4.400e-1863.29Histone H2A OS=Neosartorya fischeri (strain ATCC 1... [more]
H2A_MAGGR4.400e-1863.29Histone H2A OS=Magnaporthe grisea GN=HTA1 PE=2 SV=... [more]
H2A_GIBZE4.400e-1863.29Histone H2A OS=Gibberella zeae GN=HTA1 PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-H08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691970 ID=EY691970; Name=EY691970; organism=Citrus sinensis; type=EST; length=850bp
AAAATTAAAAATAATTAATTATTTATTTAATTATTTTTAATTTAAAAGAA
GCTGTAGCAATTAGGCGGGAAAATGTCGGGCAAAGGAGCCAAAGGACTGA
TAACAGGCAAAACCACCATTAACAACAACAAGGATAAGGACAAGAAGAAA
CCCGTCTCCCGTTCTTCTCGTGCTGGTCTTCAGTTCCCAGTGGGAAGGGT
CCATCGTCTACTAAAGGAAAGGGCTGCTGCTCACGGAAGGGTTGGCGCAA
CAGCTGCTGTTTATACAGCAGCCATTTTGGAATATCTAACTGCCGAAGTG
TTGGAGTTGGCAGGGAATGCTAGCAAGGATTTGAAGGTCAAACGTATTAC
TCCAAGGCATTTGCAGCTTGCTATCCGAGGAGATGAAGAACTTTGACACT
CTCATTAAAGGAAACCATAGCCGGTGGAGGAGTTATTCCCTCATATCCCA
CCAAGTCCCTCATCAATAAATTCCTCCAAAAAATAAATTCGTGGACCCGT
CATCCTTCTCGGATTTTGTTTCTGGGTGAAAATATTAACGGAGCCGAAAT
ATTATACCTGAAAAATGGTTGCCACAAGAGGGGTTAAATGCCAAAGAACC
CACATTCCTCTCCATATCCCTCAATTCAGTCCACAACACATAATAGGACG
TCGTATTCATCTCGAGAAGAATTCAAACAGACTAACAGGTTCTATTCGAC
AGAAATCCACCCAGGTGTAGCCCTACAAACACGCTCAAGAACAAGCCAGT
GTTTTCAGACAGTCACATCAATTAGTATTTGCTAGCGCTTAGATAGTCTC
GCGCCCGTGCGTAAGAAGCCTGTACGCGACAGAACACAAAAAGCTCGAAG
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