EY691970

Overview
NameEY691970
Unique NameEY691970
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_EMENI (Histone H2A OS=Emericella nidulans GN=htaA PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 95
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_COCIM (Histone H2A OS=Coccidioides immitis GN=HTA1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 95
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_CHLRE (Histone H2A OS=Chlamydomonas reinhardtii GN=H2A-II PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/80 (62.50%), Postives = 58/80 (72.50%), Query Frame = 1 
Query:  154 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            VSRS++AGLQFPVGR+ R LK+              Y AA+LEYLTAEVLELAGNA++D K  RI PRH+QLAIR DEEL
Sbjct:   15 VSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPV-YLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEEL 93
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_CHAGB (Histone H2A OS=Chaetomium globosum GN=HTA1 PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 96
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_BOTFB (Histone H2A OS=Botryotinia fuckeliana (strain B05.10) GN=hta1 PE=3 SV=4)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 96
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_ASPTN (Histone H2A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=hta1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 95
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_ASPOR (Histone H2A OS=Aspergillus oryzae GN=hta1 PE=3 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 95
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_ASPNG (Histone H2A OS=Aspergillus niger GN=httA PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 95
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_ASPNC (Histone H2A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=httA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 95
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_ASPFU (Histone H2A OS=Aspergillus fumigatus GN=hta1 PE=3 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSS+AGL FPVGRVHRLL++              Y AA+LEYL AE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPV-YLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 95
The following BLAST results are available for this feature:
BLAST of EY691970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 233
Match NameE-valueIdentityDescription
H2A_EMENI4.400e-1863.29Histone H2A OS=Emericella nidulans GN=htaA PE=3 SV... [more]
H2A_COCIM4.400e-1863.29Histone H2A OS=Coccidioides immitis GN=HTA1 PE=3 S... [more]
H2A_CHLRE4.400e-1862.50Histone H2A OS=Chlamydomonas reinhardtii GN=H2A-II... [more]
H2A_CHAGB4.400e-1863.29Histone H2A OS=Chaetomium globosum GN=HTA1 PE=3 SV... [more]
H2A_BOTFB4.400e-1863.29Histone H2A OS=Botryotinia fuckeliana (strain B05.... [more]
H2A_ASPTN4.400e-1863.29Histone H2A OS=Aspergillus terreus (strain NIH 262... [more]
H2A_ASPOR4.400e-1863.29Histone H2A OS=Aspergillus oryzae GN=hta1 PE=3 SV=... [more]
H2A_ASPNG4.400e-1863.29Histone H2A OS=Aspergillus niger GN=httA PE=2 SV=1[more]
H2A_ASPNC4.400e-1863.29Histone H2A OS=Aspergillus niger (strain CBS 513.8... [more]
H2A_ASPFU4.400e-1863.29Histone H2A OS=Aspergillus fumigatus GN=hta1 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-H08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691970 ID=EY691970; Name=EY691970; organism=Citrus sinensis; type=EST; length=850bp
AAAATTAAAAATAATTAATTATTTATTTAATTATTTTTAATTTAAAAGAA
GCTGTAGCAATTAGGCGGGAAAATGTCGGGCAAAGGAGCCAAAGGACTGA
TAACAGGCAAAACCACCATTAACAACAACAAGGATAAGGACAAGAAGAAA
CCCGTCTCCCGTTCTTCTCGTGCTGGTCTTCAGTTCCCAGTGGGAAGGGT
CCATCGTCTACTAAAGGAAAGGGCTGCTGCTCACGGAAGGGTTGGCGCAA
CAGCTGCTGTTTATACAGCAGCCATTTTGGAATATCTAACTGCCGAAGTG
TTGGAGTTGGCAGGGAATGCTAGCAAGGATTTGAAGGTCAAACGTATTAC
TCCAAGGCATTTGCAGCTTGCTATCCGAGGAGATGAAGAACTTTGACACT
CTCATTAAAGGAAACCATAGCCGGTGGAGGAGTTATTCCCTCATATCCCA
CCAAGTCCCTCATCAATAAATTCCTCCAAAAAATAAATTCGTGGACCCGT
CATCCTTCTCGGATTTTGTTTCTGGGTGAAAATATTAACGGAGCCGAAAT
ATTATACCTGAAAAATGGTTGCCACAAGAGGGGTTAAATGCCAAAGAACC
CACATTCCTCTCCATATCCCTCAATTCAGTCCACAACACATAATAGGACG
TCGTATTCATCTCGAGAAGAATTCAAACAGACTAACAGGTTCTATTCGAC
AGAAATCCACCCAGGTGTAGCCCTACAAACACGCTCAAGAACAAGCCAGT
GTTTTCAGACAGTCACATCAATTAGTATTTGCTAGCGCTTAGATAGTCTC
GCGCCCGTGCGTAAGAAGCCTGTACGCGACAGAACACAAAAAGCTCGAAG
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