EY691970

Overview
NameEY691970
Unique NameEY691970
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPFU (Histone H2A.Z OS=Aspergillus fumigatus GN=htz1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.461e-21
Identity = 54/79 (68.35%), Postives = 58/79 (73.42%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEEL
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEEL 103
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPCL (Histone H2A.Z OS=Aspergillus clavatus GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.461e-21
Identity = 54/79 (68.35%), Postives = 58/79 (73.42%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEEL
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEEL 103
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AZ_COCIM (Histone H2A.Z OS=Coccidioides immitis GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.909e-21
Identity = 53/79 (67.09%), Postives = 58/79 (73.42%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            S S++AGLQFP GR+ R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEEL
Sbjct:   25 SHSAKAGLQFPCGRIKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEEL 103
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPTN (Histone H2A.Z OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20
Identity = 53/79 (67.09%), Postives = 57/79 (72.15%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            S S++AGLQFP G V R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEEL
Sbjct:   25 SHSAKAGLQFPRGSVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEEL 103
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AZ_PHANO (Histone H2A.Z OS=Phaeosphaeria nodorum GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20
Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            S S++AGLQFP GR+ R L+               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEEL
Sbjct:   25 SHSAKAGLQFPCGRIKRHLRTITRQKTRIGAKASIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEEL 103
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A1A_HUMAN (Histone H2A type 1-A OS=Homo sapiens GN=HIST1H2AA PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGR+HRLL++              Y AA+LEYLTAE+LELAGNAS+D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPV-YLAAVLEYLTAEILELAGNASRDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A_CAIMO (Histone H2A OS=Cairina moschata PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AX_MOUSE (Histone H2A.x OS=Mus musculus GN=H2afx PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AX_HUMAN (Histone H2A.x OS=Homo sapiens GN=H2AFX PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AJ_RAT (Histone H2A.J OS=Rattus norvegicus GN=H2afj PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
The following BLAST results are available for this feature:
BLAST of EY691970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 233
Match NameE-valueIdentityDescription
H2AZ_ASPFU1.461e-2168.35Histone H2A.Z OS=Aspergillus fumigatus GN=htz1 PE=... [more]
H2AZ_ASPCL1.461e-2168.35Histone H2A.Z OS=Aspergillus clavatus GN=HTZ1 PE=3... [more]
H2AZ_COCIM1.909e-2167.09Histone H2A.Z OS=Coccidioides immitis GN=HTZ1 PE=3... [more]
H2AZ_ASPTN1.237e-2067.09Histone H2A.Z OS=Aspergillus terreus (strain NIH 2... [more]
H2AZ_PHANO1.616e-2065.82Histone H2A.Z OS=Phaeosphaeria nodorum GN=HTZ1 PE=... [more]
H2A1A_HUMAN6.140e-2067.09Histone H2A type 1-A OS=Homo sapiens GN=HIST1H2AA ... [more]
H2A_CAIMO1.047e-1967.09Histone H2A OS=Cairina moschata PE=3 SV=2[more]
H2AX_MOUSE1.047e-1967.09Histone H2A.x OS=Mus musculus GN=H2afx PE=1 SV=2[more]
H2AX_HUMAN1.047e-1967.09Histone H2A.x OS=Homo sapiens GN=H2AFX PE=1 SV=2[more]
H2AJ_RAT1.047e-1967.09Histone H2A.J OS=Rattus norvegicus GN=H2afj PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-H08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691970 ID=EY691970; Name=EY691970; organism=Citrus sinensis; type=EST; length=850bp
AAAATTAAAAATAATTAATTATTTATTTAATTATTTTTAATTTAAAAGAA
GCTGTAGCAATTAGGCGGGAAAATGTCGGGCAAAGGAGCCAAAGGACTGA
TAACAGGCAAAACCACCATTAACAACAACAAGGATAAGGACAAGAAGAAA
CCCGTCTCCCGTTCTTCTCGTGCTGGTCTTCAGTTCCCAGTGGGAAGGGT
CCATCGTCTACTAAAGGAAAGGGCTGCTGCTCACGGAAGGGTTGGCGCAA
CAGCTGCTGTTTATACAGCAGCCATTTTGGAATATCTAACTGCCGAAGTG
TTGGAGTTGGCAGGGAATGCTAGCAAGGATTTGAAGGTCAAACGTATTAC
TCCAAGGCATTTGCAGCTTGCTATCCGAGGAGATGAAGAACTTTGACACT
CTCATTAAAGGAAACCATAGCCGGTGGAGGAGTTATTCCCTCATATCCCA
CCAAGTCCCTCATCAATAAATTCCTCCAAAAAATAAATTCGTGGACCCGT
CATCCTTCTCGGATTTTGTTTCTGGGTGAAAATATTAACGGAGCCGAAAT
ATTATACCTGAAAAATGGTTGCCACAAGAGGGGTTAAATGCCAAAGAACC
CACATTCCTCTCCATATCCCTCAATTCAGTCCACAACACATAATAGGACG
TCGTATTCATCTCGAGAAGAATTCAAACAGACTAACAGGTTCTATTCGAC
AGAAATCCACCCAGGTGTAGCCCTACAAACACGCTCAAGAACAAGCCAGT
GTTTTCAGACAGTCACATCAATTAGTATTTGCTAGCGCTTAGATAGTCTC
GCGCCCGTGCGTAAGAAGCCTGTACGCGACAGAACACAAAAAGCTCGAAG
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