EY691970

Overview
NameEY691970
Unique NameEY691970
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AJ_MOUSE (Histone H2A.J OS=Mus musculus GN=H2afj PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AJ_MACFA (Histone H2A.J OS=Macaca fascicularis GN=H2AFJ PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AJ_HUMAN (Histone H2A.J OS=Homo sapiens GN=H2AFJ PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AJ_CHICK (Histone H2A.J OS=Gallus gallus GN=H2A-IX PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2AJ_BOVIN (Histone H2A.J OS=Bos taurus GN=H2AFJ PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A4_CHICK (Histone H2A-IV OS=Gallus gallus PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A3_RAT (Histone H2A type 3 OS=Rattus norvegicus PE=2 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A3_MOUSE (Histone H2A type 3 OS=Mus musculus GN=Hist3h2a PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A3_HUMAN (Histone H2A type 3 OS=Homo sapiens GN=HIST3H2A PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
[Close]
BLAST of EY691970 vs. ExPASy Swiss-Prot
Match: H2A2C_MOUSE (Histone H2A type 2-C OS=Mus musculus GN=Hist2h2ac PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.047e-19
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:  157 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 393
            SRSSRAGLQFPVGRVHRLL++              Y AA+LEYLTAE+LELAGNA++D K  RI PRHLQLAIR DEEL
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEEL 94
The following BLAST results are available for this feature:
BLAST of EY691970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 233
Match NameE-valueIdentityDescription
H2AJ_MOUSE1.047e-1967.09Histone H2A.J OS=Mus musculus GN=H2afj PE=2 SV=1[more]
H2AJ_MACFA1.047e-1967.09Histone H2A.J OS=Macaca fascicularis GN=H2AFJ PE=2... [more]
H2AJ_HUMAN1.047e-1967.09Histone H2A.J OS=Homo sapiens GN=H2AFJ PE=1 SV=1[more]
H2AJ_CHICK1.047e-1967.09Histone H2A.J OS=Gallus gallus GN=H2A-IX PE=3 SV=1[more]
H2AJ_BOVIN1.047e-1967.09Histone H2A.J OS=Bos taurus GN=H2AFJ PE=2 SV=1[more]
H2A4_CHICK1.047e-1967.09Histone H2A-IV OS=Gallus gallus PE=1 SV=2[more]
H2A3_RAT1.047e-1967.09Histone H2A type 3 OS=Rattus norvegicus PE=2 SV=3[more]
H2A3_MOUSE1.047e-1967.09Histone H2A type 3 OS=Mus musculus GN=Hist3h2a PE=... [more]
H2A3_HUMAN1.047e-1967.09Histone H2A type 3 OS=Homo sapiens GN=HIST3H2A PE=... [more]
H2A2C_MOUSE1.047e-1967.09Histone H2A type 2-C OS=Mus musculus GN=Hist2h2ac ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-H08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691970 ID=EY691970; Name=EY691970; organism=Citrus sinensis; type=EST; length=850bp
AAAATTAAAAATAATTAATTATTTATTTAATTATTTTTAATTTAAAAGAA
GCTGTAGCAATTAGGCGGGAAAATGTCGGGCAAAGGAGCCAAAGGACTGA
TAACAGGCAAAACCACCATTAACAACAACAAGGATAAGGACAAGAAGAAA
CCCGTCTCCCGTTCTTCTCGTGCTGGTCTTCAGTTCCCAGTGGGAAGGGT
CCATCGTCTACTAAAGGAAAGGGCTGCTGCTCACGGAAGGGTTGGCGCAA
CAGCTGCTGTTTATACAGCAGCCATTTTGGAATATCTAACTGCCGAAGTG
TTGGAGTTGGCAGGGAATGCTAGCAAGGATTTGAAGGTCAAACGTATTAC
TCCAAGGCATTTGCAGCTTGCTATCCGAGGAGATGAAGAACTTTGACACT
CTCATTAAAGGAAACCATAGCCGGTGGAGGAGTTATTCCCTCATATCCCA
CCAAGTCCCTCATCAATAAATTCCTCCAAAAAATAAATTCGTGGACCCGT
CATCCTTCTCGGATTTTGTTTCTGGGTGAAAATATTAACGGAGCCGAAAT
ATTATACCTGAAAAATGGTTGCCACAAGAGGGGTTAAATGCCAAAGAACC
CACATTCCTCTCCATATCCCTCAATTCAGTCCACAACACATAATAGGACG
TCGTATTCATCTCGAGAAGAATTCAAACAGACTAACAGGTTCTATTCGAC
AGAAATCCACCCAGGTGTAGCCCTACAAACACGCTCAAGAACAAGCCAGT
GTTTTCAGACAGTCACATCAATTAGTATTTGCTAGCGCTTAGATAGTCTC
GCGCCCGTGCGTAAGAAGCCTGTACGCGACAGAACACAAAAAGCTCGAAG
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