EY691927

Overview
NameEY691927
Unique NameEY691927
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY691927 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.100e-11
Identity = 38/91 (41.76%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  142 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPAS-NNKFTYDCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLESVKDEFVIQIG 411
            S++YA VARG VVLAE +  S N ++IA Q L+K+P + ++  +Y  D + F+    +G T   +ADE +GR+IP +FLE +   FV   G
Sbjct:    2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYG 92
The following BLAST results are available for this feature:
BLAST of EY691927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
VA712_ARATH1.100e-1141.76Vesicle-associated membrane protein 712 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-C12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691927 ID=EY691927; Name=EY691927; organism=Citrus sinensis; type=EST; length=873bp
GCAAAGCATAGCAACAAACAAAATTAGGAGAGGAGAGAGAGACCTCTNTG
GAGCTTTAAAACAAAATAAAAAATAAAAACAAGCCCAGATCTCATCTCAT
CTCAACTCGACTCAATTAGTCTCATCAAAATGAGCCAGAAATCGCTGATC
TACGCCTTCGTGGCGCGCGGAAATGTTGTGCTTGCTGAGTACACTGAGTT
CAGTGGCAATTTCAACTCCATAGCCTATCAGTGCCTCCAGAAACTCCCTG
CTTCCAACAACAAGTTCACTTACGACTGTGATGCTCACACCTTCAATTAT
CTCGTCGATAATGGTTACACATATTGTGTGGTCGCAGATGAATCGTCCGG
AAGACAAATACCGATGGCTTTTCTGGAGAGCGTGAAGGATGAATTTGTTA
TCCAAATAGGGGGGGGGAGAAGAAGAAACGGATCCTGGCAAAGGAGGGAG
CAGAGGATATCGTCCAACCATGTAAGAATAAAAGCAGTACGAAGAAACAA
AAACAAAAAAAAAAGAAAAAGATAGAGAAAGATCAGGGAAAAAAATCCAA
GAAAGAAGGAAGAAAGAGAAGAGAAAGAAAGAAGAGACTTGAATGTGAGA
TGACCAAGTAATGAAAACAGAAAAAAGAAAAGAGAAAAAGAGCAAGAAAA
ACGAGTCAAGGAAGACACAGCGAAGCAACAAGAAATTAGTGGAGAGAGAA
AATAAAGGCAGAAAGAAAGAGACGAGAGAACAAAAGCAACAAAAAACAAA
CGAAAAAGAGAAAGAAAAAAACAAAACAACAGAACGGAAAACAGAGGGAC
GAAGAAAAGAAGAAAGTAAAAGGAGGAAAAAGGGAGAGGAAACAAAAACC
AAGAGCACAAAAGCTACCACGCA
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