EY691917

Overview
NameEY691917
Unique NameEY691917
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT11_SOLTU (Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.698e-25
Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  270 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT11_ARATH (Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.698e-25
Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  270 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.897e-25
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G    GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  270 GMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT3_SOLTU (Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.897e-25
Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIA+RMSKE+TALA  +MKI+V  PP+ KY +
Sbjct:  270 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKELTALAPSSMKIKVVAPPERKYSV 341
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSJ (Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.897e-25
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G    GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  270 GMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSI (Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.897e-25
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G    GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  270 GMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT1_SOLTU (Actin-42 (Fragment) OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.897e-25
Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  246 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPCSMKIKVVAPPERKYSV 317
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT2_SOLTU (Actin-46 (Fragment) OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.783e-25
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIA+RMSKEI ALA  +MKI+V  PP+ KY +
Sbjct:  250 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIQALAPSSMKIKVVAPPERKYSV 321
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT2_PEA (Actin-2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.783e-25
Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIA+RMSKEITALA  +MKI+V  PP+ +Y +
Sbjct:  269 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERRYSV 340
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT1_TOBAC (Actin OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.783e-25
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIMKCDVDIRKDLYG IVLSGGSTMFPGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  270 GMEAAGIHETTYNSIMKCDVDIRKDLYGKIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
The following BLAST results are available for this feature:
BLAST of EY691917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 344
Match NameE-valueIdentityDescription
ACT11_SOLTU1.698e-2579.17Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1[more]
ACT11_ARATH1.698e-2579.17Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=... [more]
ACT7_ARATH2.897e-2579.17Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1[more]
ACT3_SOLTU2.897e-2577.78Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1[more]
ACT2_ORYSJ2.897e-2579.17Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE... [more]
ACT2_ORYSI2.897e-2579.17Actin-2 OS=Oryza sativa subsp. indica GN=ACT2 PE=3... [more]
ACT1_SOLTU2.897e-2579.17Actin-42 (Fragment) OS=Solanum tuberosum PE=3 SV=1[more]
ACT2_SOLTU3.783e-2579.17Actin-46 (Fragment) OS=Solanum tuberosum PE=3 SV=1[more]
ACT2_PEA3.783e-2577.78Actin-2 OS=Pisum sativum PE=2 SV=1[more]
ACT1_TOBAC3.783e-2579.17Actin OS=Nicotiana tabacum PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-B12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691917 ID=EY691917; Name=EY691917; organism=Citrus sinensis; type=EST; length=862bp
CCCGCGTCCGCGGACGCGTGGGTGCTGGTATTCATGAGACTACCTACAAC
TCCATCATGAAGTGTGATGTGGATATTAGAAAGGATCTGTATGGTAACAT
TGTTCTCAGTGGGGGTTCAACTATGTTCCCTGGTATTGCGGAACGTATGA
GCAAGGAAATCACAGCGCTTGCAACAAGAAACATGAAGATCCAGGTCCAG
GATCCACCAAAATGAAAATACAGAATATCGAAATGAACGAACAAAACTTA
CGTCCACTCCGCCCTTGACACCCGAAGCCCGAACCAAACAAGAAAGCAAA
AGAAAACAGACGCCCAAGAGGGCGGACAAAAAGGGGAAAAACAAAGAGAA
AGACACACAACGACAACAGACAGCAGAACGAAAACAAAACAAAAAAAGCA
ACAAAAAACAGAAAAGAACAAAAGAAAAAAAGAGAAGAGAAAAAAAAGAA
AAAAAACAAGAAAAAAGACAAAACAAGAGAGAGAGACAAAAGAGCGACAC
CGAACAACGCACGAGACAGAACGCGACACCAAGACACAACAAGACGAAGG
AAAAGAGACAAAAACAGCCAAGCGCAGACCCCCAAAGAACCCACAACCAG
CCACCGTCACACCGAGAACGACAAACGGACACAACAAACAAAACAACAGC
AGAGAAAACAAGAAAGACAACAACCAACAAGGACAAAAACACAAGCAAGA
CAGAAAAGCCAGAACCACACCAAGAAACACACAAAACAAGAAAACAAAGA
AGAACAAAGCCGAAAACAGGAACCAAAGAAAGCACGACGCACAAGCGAAC
AAGAAAAAAGAAAAGACACCAACCAAGACAGAGAGAGCAACCCACACGAA
AGAAACAGCCAA
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