EY691917

Overview
NameEY691917
Unique NameEY691917
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSJ (Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.453e-25
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G    GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  270 GMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSI (Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 6.453e-25
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G    GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  270 GMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT3_PEA (Actin-3 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.428e-25
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G    GIHETT+NSIMKCDVDIRKDLYGNIVLSGGSTMFPGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  270 GMESPGIHETTFNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT_MESVI (Actin OS=Mesostigma viride PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.101e-24
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIM+CDVDIRKDLYGNIVLSGGSTM PGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  270 GMESAGIHETTYNSIMRCDVDIRKDLYGNIVLSGGSTMXPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT7_TOBAC (Actin-104 (Fragment) OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.101e-24
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIMK DVDIRKDLYGNIVLSGGSTMFPGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  250 GMEAAGIHETTYNSIMKSDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 321
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT8_ARATH (Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.438e-24
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMF GIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  270 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT2_ARATH (Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.438e-24
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMF GIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  270 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT23_DICDI (Putative actin-23 OS=Dictyostelium discoideum GN=act23 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.438e-24
Identity = 60/105 (57.14%), Postives = 73/105 (69.52%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRISK*TNKTYVHSALDTRSPNQTRKQKKTDAQEGG 326
            G   AGIHETTYNSIMKCDVDIRKDLYGN+VLSGG+TMFPGIA+RM+KE+TALA   MKI++  PP+ KY +       ++ S L + S  Q     K +  E G
Sbjct:  252 GMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSV-------WIGSILASLSTFQQMWISKEEYDESG 349
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT9_SOLTU (Actin-82 (Fragment) OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.878e-24
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMF GIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  250 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFNGIADRMSKEITALAPSSMKIKVVAPPERKYSV 321
[Close]
BLAST of EY691917 vs. ExPASy Swiss-Prot
Match: ACT3_TOBAC (Actin-54 (Fragment) OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.878e-24
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 3 
Query:   12 GRVGAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAERMSKEITALATRNMKIQVQDPPK*KYRI 227
            G   AGIHETTYNSIMK DVDIRKDLYGNIVLSGGSTMFPGIA+RMSKEITALA  +MKI+V  PP+ KY +
Sbjct:  252 GMEAAGIHETTYNSIMKRDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 323
The following BLAST results are available for this feature:
BLAST of EY691917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 344
Match NameE-valueIdentityDescription
ACT3_ORYSJ6.453e-2577.78Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE... [more]
ACT3_ORYSI6.453e-2577.78Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2... [more]
ACT3_PEA8.428e-2577.78Actin-3 OS=Pisum sativum PE=2 SV=1[more]
ACT_MESVI1.101e-2477.78Actin OS=Mesostigma viride PE=3 SV=1[more]
ACT7_TOBAC1.101e-2479.17Actin-104 (Fragment) OS=Nicotiana tabacum PE=3 SV=... [more]
ACT8_ARATH1.438e-2477.78Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2[more]
ACT2_ARATH1.438e-2477.78Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1[more]
ACT23_DICDI1.438e-2457.14Putative actin-23 OS=Dictyostelium discoideum GN=a... [more]
ACT9_SOLTU1.878e-2477.78Actin-82 (Fragment) OS=Solanum tuberosum PE=3 SV=1[more]
ACT3_TOBAC1.878e-2479.17Actin-54 (Fragment) OS=Nicotiana tabacum PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-B12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691917 ID=EY691917; Name=EY691917; organism=Citrus sinensis; type=EST; length=862bp
CCCGCGTCCGCGGACGCGTGGGTGCTGGTATTCATGAGACTACCTACAAC
TCCATCATGAAGTGTGATGTGGATATTAGAAAGGATCTGTATGGTAACAT
TGTTCTCAGTGGGGGTTCAACTATGTTCCCTGGTATTGCGGAACGTATGA
GCAAGGAAATCACAGCGCTTGCAACAAGAAACATGAAGATCCAGGTCCAG
GATCCACCAAAATGAAAATACAGAATATCGAAATGAACGAACAAAACTTA
CGTCCACTCCGCCCTTGACACCCGAAGCCCGAACCAAACAAGAAAGCAAA
AGAAAACAGACGCCCAAGAGGGCGGACAAAAAGGGGAAAAACAAAGAGAA
AGACACACAACGACAACAGACAGCAGAACGAAAACAAAACAAAAAAAGCA
ACAAAAAACAGAAAAGAACAAAAGAAAAAAAGAGAAGAGAAAAAAAAGAA
AAAAAACAAGAAAAAAGACAAAACAAGAGAGAGAGACAAAAGAGCGACAC
CGAACAACGCACGAGACAGAACGCGACACCAAGACACAACAAGACGAAGG
AAAAGAGACAAAAACAGCCAAGCGCAGACCCCCAAAGAACCCACAACCAG
CCACCGTCACACCGAGAACGACAAACGGACACAACAAACAAAACAACAGC
AGAGAAAACAAGAAAGACAACAACCAACAAGGACAAAAACACAAGCAAGA
CAGAAAAGCCAGAACCACACCAAGAAACACACAAAACAAGAAAACAAAGA
AGAACAAAGCCGAAAACAGGAACCAAAGAAAGCACGACGCACAAGCGAAC
AAGAAAAAAGAAAAGACACCAACCAAGACAGAGAGAGCAACCCACACGAA
AGAAACAGCCAA
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