EY691908

Overview
NameEY691908
Unique NameEY691908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_GYMST (Elongation factor Tu, chloroplastic (Fragment) OS=Gymnochlora stellata GN=tufA PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 5.329e-63
Identity = 116/162 (71.60%), Postives = 144/162 (88.89%), Query Frame = 3
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDE-ESKMVMPGRPVS 494
            P+R+T+ PFL+AVEDVFSITGRGTVATGRVERG IK+G+TV++VGLKETR+ TVTG++MFQK L E++AGDNVG+LLRG+QK DIQRGMV+A+PG+ITPH  F A VYVL KEEGGRH+PF +GYRPQFY+RTTDVTG+V S+ +D+D+ E KMV+PG  V+
Sbjct:  188 PERETEKPFLMAVEDVFSITGRGTVATGRVERGGIKIGDTVEIVGLKETRSTTVTGLKMFQKMLQESIAGDNVGMLLRGIQKTDIQRGMVIAQPGSITPHVSFEAQVYVLTKEEGGRHTPFLSGYRPQFYVRTTDVTGKVESLKSDEDKSEMKMVVPGDRVT 349          
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_THEEB (Elongation factor Tu OS=Thermosynechococcus elongatus (strain BP-1) GN=tuf PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 6.576e-63
Identity = 109/157 (69.43%), Postives = 135/157 (85.99%), Query Frame = 3
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPG 482
            P+R  D PFL+AVEDVFSITGRGTVATGR+ERG IK+ ETV+LVGL+ETR  TVTG+EMF+K+L+E +AGDN GLLLRG++K D++RGMV+AKPG+ITPHTKF   VYVL ++EGGR +PFFAGYRPQFY+RTTDVTG ++S  +D    ++MVMPG
Sbjct:  213 PERDVDKPFLMAVEDVFSITGRGTVATGRIERGRIKLNETVELVGLRETRTTTVTGIEMFKKSLEEGIAGDNAGLLLRGLKKEDVERGMVIAKPGSITPHTKFEGEVYVLTEKEGGRKTPFFAGYRPQFYVRTTDVTGTITSFTSDDGSAAEMVMPG 369          

HSP 2 Score: 30.8018 bits (68), Expect = 6.576e-63
Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 1
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A EQGM+FA++E  +T
Sbjct:  377 ELIQPIAIEQGMRFAIREGGRT 398          
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS3 (Elongation factor Tu OS=Synechococcus sp. (strain CC9311) GN=tuf PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 9.089e-63
Identity = 118/185 (63.78%), Postives = 142/185 (76.76%), Query Frame = 3
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGRPVSRWFVGAYYAHGL*AGDEICPPRKE 566
            P+R+ D PFL+A+EDVFSITGRGTVATGR+ERG +KVGE V++VG++E R  TVTGVEMF+K LDE MAGDNVGLLLRG+QK DI+RGMVL KPG+ITPHTKF   VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++   +     +MVMPG  +               G+ ICP   E
Sbjct:  203 PEREVDKPFLMAIEDVFSITGRGTVATGRIERGIVKVGEEVEVVGIREPRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKPGSITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIQM------------TGELICPVAME 375          
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_PROMM (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9313) GN=tuf PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.118e-62
Identity = 107/157 (68.15%), Postives = 134/157 (85.35%), Query Frame = 3
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPG 482
            P+R+ + PFL+AVEDVFSITGRGTVATGR+ERG +K GE +++VG++++R  TVTGVEMF+K LDE +AGDN GLLLRG++K DI+RGMVL KPG+ITPHTKF   VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++   +     +MVMPG
Sbjct:  203 PEREIEKPFLMAVEDVFSITGRGTVATGRIERGKVKKGEEIEIVGIRDSRKTTVTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMVLVKPGSITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPG 359          

HSP 2 Score: 30.4166 bits (67), Expect = 1.118e-62
Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 1
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A EQGM+FA++E  +T
Sbjct:  367 ELICPVAIEQGMRFAIREGGRT 388          
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_PROM3 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9303) GN=tuf PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.118e-62
Identity = 107/157 (68.15%), Postives = 134/157 (85.35%), Query Frame = 3
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPG 482
            P+R+ + PFL+AVEDVFSITGRGTVATGR+ERG +K GE +++VG++++R  TVTGVEMF+K LDE +AGDN GLLLRG++K DI+RGMVL KPG+ITPHTKF   VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++   +     +MVMPG
Sbjct:  203 PEREIEKPFLMAVEDVFSITGRGTVATGRIERGKVKKGEEIEIVGIRDSRKTTVTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMVLVKPGSITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPG 359          

HSP 2 Score: 30.4166 bits (67), Expect = 1.118e-62
Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 1
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A EQGM+FA++E  +T
Sbjct:  367 ELICPVAIEQGMRFAIREGGRT 388          
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS9 (Elongation factor Tu OS=Synechococcus sp. (strain CC9902) GN=tuf PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.025e-62
Identity = 117/185 (63.24%), Postives = 142/185 (76.76%), Query Frame = 3
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGRPVSRWFVGAYYAHGL*AGDEICPPRKE 566
            P+R+ D PFL+A+EDVFSITGRGTVATGR+ERG +KVGE V++VG+++ R  TVTGVEMF+K LDE MAGDNVGLLLRG+QK DI+RGMVL KPG+ITPHTKF   VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++   +     +MVMPG  +               G+ ICP   E
Sbjct:  203 PEREVDKPFLMAIEDVFSITGRGTVATGRIERGIVKVGEEVEVVGIRDPRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVLVKPGSITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIQM------------TGELICPVAME 375          
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP4 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=tuf PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 2.479e-62
Identity = 108/157 (68.79%), Postives = 133/157 (84.71%), Query Frame = 3
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPG 482
            P+R  D PFL+AVEDVFSITGRGTVATGR+ERG +K+ +TV++VG++ETR  TVTG+EMF+K+LDE MAGDN GLLLRG++K DI+RGMVLAKPG+ITPHT+F   VYVL ++EGGR +PFFAGYRPQFY+RTTDVTG + S   D    ++MVMPG
Sbjct:  213 PERDVDKPFLMAVEDVFSITGRGTVATGRIERGKVKINDTVEVVGIRETRTTTVTGIEMFKKSLDEGMAGDNAGLLLRGLKKEDIERGMVLAKPGSITPHTEFEGEVYVLTEKEGGRKTPFFAGYRPQFYVRTTDVTGTIKSFTADDGSNAEMVMPG 369          

HSP 2 Score: 30.0314 bits (66), Expect = 2.479e-62
Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 1
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A EQGM+FA++E  +T
Sbjct:  377 ELINPIAIEQGMRFAIREGGRT 398          
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_SYNPX (Elongation factor Tu OS=Synechococcus sp. (strain WH8102) GN=tuf PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.645e-62
Identity = 117/185 (63.24%), Postives = 141/185 (76.22%), Query Frame = 3
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGRPVSRWFVGAYYAHGL*AGDEICPPRKE 566
            P+R+ D PFL+AVEDVFSITGRGTVATGR+ERG +KVGE +++VG+K+ R  TVTGVEMF+K L+E MAGDN GLLLRG+QK DI+RGMVL KPG+ITPHTKF   VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++   D     +MVMPG  +               G+ ICP   E
Sbjct:  203 PEREVDKPFLMAVEDVFSITGRGTVATGRIERGKVKVGEEIEIVGIKDARKTTVTGVEMFRKLLEEGMAGDNCGLLLRGIQKEDIERGMVLVKPGSITPHTKFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGSAVEMVMPGDRIKM------------TGELICPVAME 375          
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_SCEOB (Elongation factor Tu, chloroplastic OS=Scenedesmus obliquus GN=tufA PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 3.231e-62
Identity = 114/166 (68.67%), Postives = 136/166 (81.93%), Query Frame = 3
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMN---------DKDEESKMVMPG 482
            P R+TD PFLLAVEDV SITGRGTVATGRVERGT+KVGE V+L+GLK+T+   VTG+EMF+KTLDE MAGDNVG+LLRG+QK D++RGMVLAKPG+ITPHTKF A VYVL KEEGGRHSPF  GY+PQF++RTTDVTG++ S  +          ++  +KM MPG
Sbjct:  213 PDRETDKPFLLAVEDVLSITGRGTVATGRVERGTLKVGENVELIGLKDTKATVVTGLEMFKKTLDETMAGDNVGVLLRGIQKKDVERGMVLAKPGSITPHTKFEAQVYVLTKEEGGRHSPFLVGYQPQFFIRTTDVTGKIVSFTHIQMKNPSSVAEEHSNKMAMPG 378          

HSP 2 Score: 27.7202 bits (60), Expect = 3.231e-62
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 1
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            +LI P+A E+GM+FA++E  +T
Sbjct:  386 QLIYPVAVEKGMRFAIREGGRT 407          
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_PROWI (Elongation factor Tu, plastid OS=Prototheca wickerhamii GN=tufA PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 4.214e-62
Identity = 110/157 (70.06%), Postives = 134/157 (85.35%), Query Frame = 3
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPG 482
            P+R  + PFL+A+EDVFSITGRGTVATGRVERG +K+G++V++VGL  T+  TVTG+EMFQKTLDE++AGDNVG+LLRG+QK +IQRGMVLAKP +ITPHT F A VYVL KEEGGR +PFF+GYRPQFY+RTTDVTG++ S   D  E  KMV+PG
Sbjct:  213 PKRNIEKPFLMAIEDVFSITGRGTVATGRVERGVVKIGDSVEIVGLGATKITTVTGLEMFQKTLDESIAGDNVGILLRGIQKTEIQRGMVLAKPKSITPHTNFEAQVYVLNKEEGGRDTPFFSGYRPQFYVRTTDVTGKIESFCTDAGEPIKMVLPG 369          

HSP 2 Score: 28.1054 bits (61), Expect = 4.214e-62
Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 1
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A E+ M+FA++E  KT
Sbjct:  377 ELIQPIAIERNMRFAIREGGKT 398          
The following BLAST results are available for this feature:
BLAST of EY691908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_GYMST5.329e-6371.60Elongation factor Tu, chloroplastic (Fragment) OS=... [more]
EFTU_THEEB6.576e-6369.43Elongation factor Tu OS=Thermosynechococcus elonga... [more]
EFTU_SYNS39.089e-6363.78Elongation factor Tu OS=Synechococcus sp. (strain ... [more]
EFTU_PROMM1.118e-6268.15Elongation factor Tu OS=Prochlorococcus marinus (s... [more]
EFTU_PROM31.118e-6268.15Elongation factor Tu OS=Prochlorococcus marinus (s... [more]
EFTU_SYNS92.025e-6263.24Elongation factor Tu OS=Synechococcus sp. (strain ... [more]
EFTU_CYAP42.479e-6268.79Elongation factor Tu OS=Cyanothece sp. (strain PCC... [more]
EFTU_SYNPX2.645e-6263.24Elongation factor Tu OS=Synechococcus sp. (strain ... [more]
EFTU_SCEOB3.231e-6268.67Elongation factor Tu, chloroplastic OS=Scenedesmus... [more]
EFTU_PROWI4.214e-6270.06Elongation factor Tu, plastid OS=Prototheca wicker... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-B02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691908 ID=EY691908; Name=EY691908; organism=Citrus sinensis; type=EST; length=951bp
TACATTCCTATCCCCAAAGACAAACTGATTTGCCCTTTTTGTTAGCTGTT
GAAGATGTGTTTTCAATTACTGGTCGTGGTACTGTGGCCACTGGCCGTGT
TGAGAGAGGTACTATTAAGGTTGGAGAGACTGTTGATCTTGTGGGATTGA
AGGAAACTAGGAATTTCACTGTAACTGGGGTTGAAATGTTTCAAAAGACT
CTAGACGAGGCAATGGCTGGGGATAATGTCGGGTTGTTACTTAGAGGTGT
ACAAAAGGCTGATATTCAGAGAGGGATGGTGTTGGCCAAGCCCGGAACAA
TTACTCCCCATACTAAGTTCCTGGCCATTGTGTATGTGTTGAAGAAGGAA
GAAGGTGGTAGGCACTCACCTTTCTTTGCGGGTTACAGGCCTCAATTTTA
CATGAGGACCACTGATGTGACTGGAAGGGTGTCTTCTATTATGAACGACA
AGGACGAGGAGTCCAAGATGGTTATGCCTGGGCGACCCGTGTCAAGATGG
TTTGTGGGAGCTTATTATGCCCATGGCTTGTGAGCAGGGGATGAAATTTG
CCCTCCAAGAAAGGAGAAAAACTGGTTGGAGCTGGGGGTTTTCAGTCCAT
CATTGAATGAAAATATTAGGAACTTTTAGGGGCAGTGGAATTTTCTTTTT
CTTTTTTGAGCGGGGGTTAAAACTTCTAATTCTTTTAATTTTTTATGGGA
ATTATTTCCCCCTTCCTCGGAACTTTCCCAAACCCAAGGTCCATAAAAAT
TTGCGAGTTTTTGTTCCTTTTTTTAGATTTGAAACTCCATTTAAAATTCA
CATTTGGGAAAAATGGTATCCTAGAGGAAAATTTCATCAATAAACACCCA
CCCCTTTTTTCCCCCACCATGTGTGTCTCACCCCTTAAAAAAAAAAAAAA
AAAAAAATAAAAAAAATAACAGGGGGGGGGGGTGCCCCCCTCCTCCTTTT
A
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