EY691908

Overview
NameEY691908
Unique NameEY691908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMF (Elongation factor Tu OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.207e-58
Identity = 109/161 (67.70%), Postives = 128/161 (79.50%), Query Frame = 3 
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGRPVS 494
            P+R  D PFLL +EDVFSI+GRGTV TGRVERG I VG+ +++VGLKET+  T TGVEMF+K LDE  AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V+      +E  +MVMPG  V+
Sbjct:  203 PERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVT-----LEEGVEMVMPGENVT 358

HSP 2 Score: 28.1054 bits (61), Expect = 1.207e-58
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 1 
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A E+G++FA++E  +T
Sbjct:  362 ELIAPIAMEEGLRFAIREGGRT 383
[Close]
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMB (Elongation factor Tu OS=Neisseria meningitidis serogroup B GN=tufA PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.207e-58
Identity = 109/161 (67.70%), Postives = 128/161 (79.50%), Query Frame = 3 
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGRPVS 494
            P+R  D PFLL +EDVFSI+GRGTV TGRVERG I VG+ +++VGLKET+  T TGVEMF+K LDE  AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V+      +E  +MVMPG  V+
Sbjct:  203 PERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVT-----LEEGVEMVMPGENVT 358

HSP 2 Score: 28.1054 bits (61), Expect = 1.207e-58
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 1 
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A E+G++FA++E  +T
Sbjct:  362 ELIAPIAMEEGLRFAIREGGRT 383
[Close]
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMA (Elongation factor Tu OS=Neisseria meningitidis serogroup A GN=tufA PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.207e-58
Identity = 109/161 (67.70%), Postives = 128/161 (79.50%), Query Frame = 3 
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGRPVS 494
            P+R  D PFLL +EDVFSI+GRGTV TGRVERG I VG+ +++VGLKET+  T TGVEMF+K LDE  AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V+      +E  +MVMPG  V+
Sbjct:  203 PERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVT-----LEEGVEMVMPGENVT 358

HSP 2 Score: 28.1054 bits (61), Expect = 1.207e-58
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 1 
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A E+G++FA++E  +T
Sbjct:  362 ELIAPIAMEEGLRFAIREGGRT 383
[Close]
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_SPIPL (Elongation factor Tu OS=Spirulina platensis GN=tuf PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.050e-58
Identity = 106/158 (67.09%), Postives = 127/158 (80.38%), Query Frame = 3 
Query:   12 PQRQTDLPFLLAV-EDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPG 482
            P+R  D   L  + EDVFSITGRGTV+T  +ERG +KVG+TV+L+G+K+TR  TVTG EMFQKTL+E MAGDNVGLLLRG+QK D+QRGMV+AKP +ITPHTKF A VY+LKKEEGGRH+PFF GYRPQFY+RTTDVTG +     D     +MV+PG
Sbjct:  213 PERDIDKGLLDGLWEDVFSITGRGTVSTAGIERGKVKVGDTVELIGIKDTRTTTVTGAEMFQKTLEEGMAGDNVGLLLRGIQKNDVQRGMVIAKPKSITPHTKFEAEVYILKKEEGGRHTPFFKGYRPQFYVRTTDVTGTIDEFTADDGSTPEMVIPG 370

HSP 2 Score: 29.261 bits (64), Expect = 2.050e-58
Identity = 12/22 (54.55%), Postives = 18/22 (81.82%), Query Frame = 1 
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            +LI P+A EQGM+FA++E  +T
Sbjct:  378 QLICPIAIEQGMRFAIREGGRT 399
[Close]
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU2_THETN (Elongation factor Tu-B OS=Thermoanaerobacter tengcongensis GN=tufB PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.486e-58
Identity = 110/162 (67.90%), Postives = 129/162 (79.63%), Query Frame = 3 
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGRPVS 494
            P+R  D PFL+ VEDVFSITGRGTVATGRVERG +KVG+ V+++GL  E+R   VTGVEMF+KTLDEA AGDN+G+LLRG+QK +++RG VLAKPGTI PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +        E  +MVMPG  V+
Sbjct:  208 PERDIDKPFLMPVEDVFSITGRGTVATGRVERGKVKVGDEVEIIGLTTESRKTVVTGVEMFRKTLDEAQAGDNIGVLLRGIQKDEVERGQVLAKPGTIKPHTKFEAQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGTI-----QLPEGVEMVMPGDHVT 364

HSP 2 Score: 29.261 bits (64), Expect = 3.486e-58
Identity = 12/22 (54.55%), Postives = 18/22 (81.82%), Query Frame = 1 
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A E+G+KFA++E  +T
Sbjct:  368 ELITPIAMEEGLKFAIREGGRT 389
[Close]
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_NEIG1 (Elongation factor Tu OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 3.486e-58
Identity = 108/161 (67.08%), Postives = 128/161 (79.50%), Query Frame = 3 
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGRPVS 494
            P+R  D PFLL +EDVFSI+GRGTV TGRVERG I VG+ +++VGLKET+  T TGVEMF+K LDE  AGDNVG+LLRG ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V+      ++  +MVMPG  V+
Sbjct:  203 PERAVDKPFLLPIEDVFSISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVT-----LEKGVEMVMPGENVT 358

HSP 2 Score: 28.1054 bits (61), Expect = 3.486e-58
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 1 
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A E+G++FA++E  +T
Sbjct:  362 ELIAPIAMEEGLRFAIREGGRT 383
[Close]
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_PROVI (Elongation factor Tu OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=tuf PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.007e-57
Identity = 108/161 (67.08%), Postives = 125/161 (77.64%), Query Frame = 3 
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGRPVS 494
            P R  D PFL+ VEDVFSI+GRGTV TGR+ERG IK+ E V++VG+++TR   VTG+EMFQK LDE  AGDN GLLLRGV K D++RGMV+AKPGTI PHTKF A VY+LKKEEGGRH+PFF  YRPQFY RTTDVTG VS       E  +MVMPG  +S
Sbjct:  202 PVRDVDKPFLMPVEDVFSISGRGTVGTGRIERGRIKINEEVEIVGIRDTRKSVVTGIEMFQKLLDEGQAGDNAGLLLRGVDKNDLERGMVIAKPGTIKPHTKFKAEVYILKKEEGGRHTPFFTNYRPQFYFRTTDVTGAVS-----LPEGVEMVMPGDNLS 357

HSP 2 Score: 26.9498 bits (58), Expect = 1.007e-57
Identity = 10/22 (45.45%), Postives = 18/22 (81.82%), Query Frame = 1 
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A ++G++FA++E  +T
Sbjct:  361 ELIAPIAMDEGLRFAIREGGRT 382
[Close]
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_STIHE (Elongation factor Tu, chloroplastic OS=Stigeoclonium helveticum GN=tufA PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.711e-57
Identity = 104/140 (74.29%), Postives = 122/140 (87.14%), Query Frame = 3 
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRV 431
            P+R+ D PFLLAVEDVFSITGRGTVATGRVERGT+KV ETV+++GL++T+  TVT +EMFQKTLDE +AGDNVG+LLRGVQK DI+RGMV+AKPGTI PHT F   VYVL  EEGGR S FF GY+PQFY+RTTDVTG++
Sbjct:  213 PKREMDKPFLLAVEDVFSITGRGTVATGRVERGTLKVNETVEIIGLRDTKTTTVTAIEMFQKTLDETIAGDNVGILLRGVQKKDIERGMVIAKPGTILPHTLFEGQVYVLTAEEGGRKSGFFKGYQPQFYVRTTDVTGKI 352

HSP 2 Score: 27.7202 bits (60), Expect = 1.711e-57
Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 1 
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            +LI P+A E+GM+FA++E  +T
Sbjct:  386 QLITPIAIEKGMRFAIREGGRT 407
[Close]
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU1_THETN (Elongation factor Tu-A OS=Thermoanaerobacter tengcongensis GN=tufA PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.712e-57
Identity = 108/162 (66.67%), Postives = 129/162 (79.63%), Query Frame = 3 
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLK-ETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGRPVS 494
            P+R  D PFL+ VEDVF+ITGRGTVATGRVERG +KVG+ V+++GL  E+R   VTGVEMF+KTLDEA AGDN+G+LLRG+Q+ +++RG VLAKPGTI PHTKF A VYVL KEEGGRH+PFF GYRPQFY RTTDVTG +        E  +MVMPG  V+
Sbjct:  208 PERDIDKPFLMPVEDVFTITGRGTVATGRVERGKVKVGDEVEIIGLTTESRKTVVTGVEMFRKTLDEAQAGDNIGVLLRGIQRDEVERGQVLAKPGTIKPHTKFEAQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGTI-----QLPEGVEMVMPGDHVT 364

HSP 2 Score: 29.261 bits (64), Expect = 1.712e-57
Identity = 12/22 (54.55%), Postives = 18/22 (81.82%), Query Frame = 1 
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A E+G+KFA++E  +T
Sbjct:  368 ELITPIAMEEGLKFAIREGGRT 389
[Close]
BLAST of EY691908 vs. ExPASy Swiss-Prot
Match: EFTU_SORC5 (Elongation factor Tu OS=Sorangium cellulosum (strain So ce56) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.712e-57
Identity = 107/157 (68.15%), Postives = 124/157 (78.98%), Query Frame = 3 
Query:   12 PQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLKETRNFTVTGVEMFQKTLDEAMAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPG 482
            P R  D PFL+A+EDVFSI GRGTVATGR+ERG IKVG+ V ++G K+T+   VTGVEMF+K LD+  AGDNVG LLRGV+K +I+RG VLAKPG+ITPHTKF   VYVLKKEEGGRH+PFF  YRPQFY+RTTDVTG V     +  E  KMVMPG
Sbjct:  205 PVRDIDKPFLMAIEDVFSIKGRGTVATGRIERGVIKVGDEVQIIGFKDTKKSVVTGVEMFRKLLDQGQAGDNVGCLLRGVEKEEIERGQVLAKPGSITPHTKFTGEVYVLKKEEGGRHTPFFTNYRPQFYIRTTDVTGTV-----NLPEGVKMVMPG 356

HSP 2 Score: 27.335 bits (59), Expect = 1.712e-57
Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 1 
Query:  508 ELIMPMACEQGMKFALQERRKT 573
            ELI P+A E+ M+FA++E  KT
Sbjct:  364 ELIAPVALEEQMRFAIREGGKT 385
The following BLAST results are available for this feature:
BLAST of EY691908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_NEIMF1.207e-5867.70Elongation factor Tu OS=Neisseria meningitidis ser... [more]
EFTU_NEIMB1.207e-5867.70Elongation factor Tu OS=Neisseria meningitidis ser... [more]
EFTU_NEIMA1.207e-5867.70Elongation factor Tu OS=Neisseria meningitidis ser... [more]
EFTU_SPIPL2.050e-5867.09Elongation factor Tu OS=Spirulina platensis GN=tuf... [more]
EFTU2_THETN3.486e-5867.90Elongation factor Tu-B OS=Thermoanaerobacter tengc... [more]
EFTU_NEIG13.486e-5867.08Elongation factor Tu OS=Neisseria gonorrhoeae (str... [more]
EFTU_PROVI1.007e-5767.08Elongation factor Tu OS=Prosthecochloris vibriofor... [more]
EFTU_STIHE1.711e-5774.29Elongation factor Tu, chloroplastic OS=Stigeocloni... [more]
EFTU1_THETN1.712e-5766.67Elongation factor Tu-A OS=Thermoanaerobacter tengc... [more]
EFTU_SORC51.712e-5768.15Elongation factor Tu OS=Sorangium cellulosum (stra... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-B02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691908 ID=EY691908; Name=EY691908; organism=Citrus sinensis; type=EST; length=951bp
TACATTCCTATCCCCAAAGACAAACTGATTTGCCCTTTTTGTTAGCTGTT
GAAGATGTGTTTTCAATTACTGGTCGTGGTACTGTGGCCACTGGCCGTGT
TGAGAGAGGTACTATTAAGGTTGGAGAGACTGTTGATCTTGTGGGATTGA
AGGAAACTAGGAATTTCACTGTAACTGGGGTTGAAATGTTTCAAAAGACT
CTAGACGAGGCAATGGCTGGGGATAATGTCGGGTTGTTACTTAGAGGTGT
ACAAAAGGCTGATATTCAGAGAGGGATGGTGTTGGCCAAGCCCGGAACAA
TTACTCCCCATACTAAGTTCCTGGCCATTGTGTATGTGTTGAAGAAGGAA
GAAGGTGGTAGGCACTCACCTTTCTTTGCGGGTTACAGGCCTCAATTTTA
CATGAGGACCACTGATGTGACTGGAAGGGTGTCTTCTATTATGAACGACA
AGGACGAGGAGTCCAAGATGGTTATGCCTGGGCGACCCGTGTCAAGATGG
TTTGTGGGAGCTTATTATGCCCATGGCTTGTGAGCAGGGGATGAAATTTG
CCCTCCAAGAAAGGAGAAAAACTGGTTGGAGCTGGGGGTTTTCAGTCCAT
CATTGAATGAAAATATTAGGAACTTTTAGGGGCAGTGGAATTTTCTTTTT
CTTTTTTGAGCGGGGGTTAAAACTTCTAATTCTTTTAATTTTTTATGGGA
ATTATTTCCCCCTTCCTCGGAACTTTCCCAAACCCAAGGTCCATAAAAAT
TTGCGAGTTTTTGTTCCTTTTTTTAGATTTGAAACTCCATTTAAAATTCA
CATTTGGGAAAAATGGTATCCTAGAGGAAAATTTCATCAATAAACACCCA
CCCCTTTTTTCCCCCACCATGTGTGTCTCACCCCTTAAAAAAAAAAAAAA
AAAAAAATAAAAAAAATAACAGGGGGGGGGGGTGCCCCCCTCCTCCTTTT
A
back to top