EY691852

Overview
NameEY691852
Unique NameEY691852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 2.697e-65
Identity = 127/178 (71.35%), Postives = 138/178 (77.53%), Query Frame = 2
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK                           HAQE LR   +  F G + ++V++K GFT+
Sbjct:    1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKD--AHGHHAQEALRRA-KFKFPGRQKIIVSRKWGFTK 175          
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_MAIZE (60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 7.846e-65
Identity = 126/178 (70.79%), Postives = 137/178 (76.97%), Query Frame = 2
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYRQIKNKP PKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWE+ENVSSEALEAARI CNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ                       A HA E LR   +  F   + ++ ++K GFT+
Sbjct:    1 MGRRPARCYRQIKNKPCPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWERENVSSEALEAARIVCNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDN--NAAHASEALRRA-KFKFPARQKIIESRKWGFTK 175          
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_DROME (60S ribosomal protein L10 OS=Drosophila melanogaster GN=Qm PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 8.695e-56
Identity = 111/183 (60.66%), Postives = 132/183 (72.13%), Query Frame = 2
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQ----EGLRPG*RSGF*GVKGLLVTKKRGFTQH 583
            MGRRPARCYR  KNKPYPKSRFCRGVPDPKIRI+D+G KK  V++FP CVHLVS E E +SSEALEA RI CNKY+ KY GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                P+  + ++   +    E LR   +  F G + + V+KK GFT++
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQ------GTVARVRIGQPIMSVRSSDRYKAQVIEALRRA-KFKFPGRQKIYVSKKWGFTKY 176          
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_BOMMA (60S ribosomal protein L10 OS=Bombyx mandarina GN=RpL10 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 5.636e-55
Identity = 110/183 (60.11%), Postives = 131/183 (71.58%), Query Frame = 2
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQ----EGLRPG*RSGF*GVKGLLVTKKRGFTQH 583
            MGRRPARCYR  KNKPYPKSRFCRGVPDPKIRI+D+G K+  VD+FP CVHLVS E E +SSEALEA RI CNKY+ K  GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                P+  + ++   +    E LR   +  F G + + V+KK GFT++
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQ------GTVARVRIGQPIMSVRSSDRWKAQVIEALRRA-KFKFPGRQKIYVSKKWGFTKY 176          
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_SHEEP (60S ribosomal protein L10 OS=Ovis aries GN=RPL10 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.063e-53
Identity = 110/178 (61.80%), Postives = 124/178 (69.66%), Query Frame = 2
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNKEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175          
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_RAT (60S ribosomal protein L10 OS=Rattus norvegicus GN=Rpl10 PE=1 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 1.063e-53
Identity = 110/178 (61.80%), Postives = 124/178 (69.66%), Query Frame = 2
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNKEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175          
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_PONAB (60S ribosomal protein L10 OS=Pongo abelii GN=RPL10 PE=2 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 1.063e-53
Identity = 110/178 (61.80%), Postives = 124/178 (69.66%), Query Frame = 2
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNKEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175          
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_PIG (60S ribosomal protein L10 OS=Sus scrofa GN=RPL10 PE=2 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 1.063e-53
Identity = 110/178 (61.80%), Postives = 124/178 (69.66%), Query Frame = 2
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNKEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175          
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_PAPAN (60S ribosomal protein L10 OS=Papio anubis GN=RPL10 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.063e-53
Identity = 110/178 (61.80%), Postives = 124/178 (69.66%), Query Frame = 2
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNKEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175          
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_MOUSE (60S ribosomal protein L10 OS=Mus musculus GN=Rpl10 PE=2 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 1.063e-53
Identity = 110/178 (61.80%), Postives = 124/178 (69.66%), Query Frame = 2
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNKEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175          
The following BLAST results are available for this feature:
BLAST of EY691852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
RL102_ARATH2.697e-6571.3560S ribosomal protein L10-2 OS=Arabidopsis thalian... [more]
RL10_MAIZE7.846e-6570.7960S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=... [more]
RL10_DROME8.695e-5660.6660S ribosomal protein L10 OS=Drosophila melanogast... [more]
RL10_BOMMA5.636e-5560.1160S ribosomal protein L10 OS=Bombyx mandarina GN=R... [more]
RL10_SHEEP1.063e-5361.8060S ribosomal protein L10 OS=Ovis aries GN=RPL10 P... [more]
RL10_RAT1.063e-5361.8060S ribosomal protein L10 OS=Rattus norvegicus GN=... [more]
RL10_PONAB1.063e-5361.8060S ribosomal protein L10 OS=Pongo abelii GN=RPL10... [more]
RL10_PIG1.063e-5361.8060S ribosomal protein L10 OS=Sus scrofa GN=RPL10 P... [more]
RL10_PAPAN1.063e-5361.8060S ribosomal protein L10 OS=Papio anubis GN=RPL10... [more]
RL10_MOUSE1.063e-5361.8060S ribosomal protein L10 OS=Mus musculus GN=Rpl10... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-027-D05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691852 ID=EY691852; Name=EY691852; organism=Citrus sinensis; type=EST; length=984bp
CCACGCGTCCGGAGAGAATAGCTGAGACCGAACACGAACGCTCGCCATGG
GAAGAAGACCGGCAAGGTGTTACCGCCAAATCAAGAACAAACCCTACCCA
AAGTCCCGCTTTTGCCGCGGTGTCCCCGATCCCAAGATCAGAATCTACGA
TGTCGGGATGAAGAAGAAAGGCGTCGACGAGTTCCCCTTCTGCGTTCACC
TCGTCAGTTGGGAGAAGGAGAACGTGTCGAGCGAGGCCTTGGAAGCTGCC
CGTATCGCTTGCAACAAGTACATGGCCAAGTACGCCGGCAAGGATGCTTT
CCATTTGCGAGTGAGGGTGCACCCCTTCCATGTTCTGCGTATTAACAAGA
TGCTTTCGTGTGCTGGGGCTGATAGGCTCCAGACTGGAATGAGGGGTGCT
TTTGGAAAGCCCCAAGGAACCTGTGGCTCGTGTTTGCTATCGGGCAGGTC
TTTGCTTTTCTGTCCGTTGCAAGGGATAGTAACAGCCCCCCATGCTCAGG
AGGGCCTTCGCCCTGGCTAACGTTCAGGTTTCTGAGGCGTCAAAGGATTA
TTGGTCACCAAGAAAAGGGGATTTACCCAGCATCTACCGAGGAGATAATT
CGGGAGTGGGAAGACAGATATAAAGGGATAGTTACATGAAGGGTTGTCAA
GGGTCACTTTCTCCGGATTAATGGTACAATTGGATGATCCTACCACCAGT
ACAATCTATCATTGGGAAATACAGGACAAGAGAATTATTGTAAATACAAC
TAATAAGTGAGGGAAGTGTCGGCGAGCTCGTGAATAAAAATCATACTACG
CTCATGTAATTAACGATGGTACGTGAAAGAGTGCACGCAAGAGGAATTAA
GATGTAAAATTAAAAGAGGGAAATTATAACGTTTAATTGAGAGATTCATA
TGGAATAACATTACCTATGAAGGCAGATAATCGAAGAAAAAAGGAACTGG
AATCTATTGAAGAAGTAATAACAACGGACAAATA
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