EY691852

Overview
NameEY691852
Unique NameEY691852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length984
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_HUMAN (60S ribosomal protein L10 OS=Homo sapiens GN=RPL10 PE=1 SV=4)

HSP 1 Score: 210.69 bits (535), Expect = 1.063e-53
Identity = 110/178 (61.80%), Postives = 124/178 (69.66%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNKEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_DICDI (60S ribosomal protein L10 OS=Dictyostelium discoideum GN=rpl10 PE=3 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 1.063e-53
Identity = 109/181 (60.22%), Postives = 129/181 (71.27%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSG--F*GVKGLLVTKKRGFTQH 583
            MGRRPARCYR  KNKPY KSR+CRGVPD KIRI+D+G KK   DEFP CVHL+S EKE +SSEA+EA RI+CNKY++K  GKD+FH+RVRVHP+HVLRINKMLSCAGADRLQTGMRGAFGKP                     ++   +  E LR   RS   F G + ++V+KK GFT +
Sbjct:    1 MGRRPARCYRYCKNKPYIKSRYCRGVPDAKIRIFDLGRKKASTDEFPLCVHLISLEKEQLSSEAIEAGRISCNKYISKTGGKDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAFGKPMGTVARVNIGQIIFSIRTRDNMLA--NVVEALR---RSSYKFPGRQKIVVSKKWGFTAY 176
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_BOVIN (60S ribosomal protein L10 OS=Bos taurus GN=RPL10 PE=2 SV=4)

HSP 1 Score: 210.69 bits (535), Expect = 1.063e-53
Identity = 110/178 (61.80%), Postives = 124/178 (69.66%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNKEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10L_MOUSE (60S ribosomal protein L10-like OS=Mus musculus GN=Rpl10l PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.063e-53
Identity = 110/178 (61.80%), Postives = 124/178 (69.66%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNKEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10L_BOVIN (60S ribosomal protein L10-like OS=Bos taurus GN=RPL10L PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.063e-53
Identity = 110/178 (61.80%), Postives = 124/178 (69.66%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNKEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_CAEEL (60S ribosomal protein L10 OS=Caenorhabditis elegans GN=rpl-10 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.388e-53
Identity = 110/178 (61.80%), Postives = 127/178 (71.35%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR IKNKPYPKSRFCRGVPD KIRI+D+G K+  VD FP CVH++S E+E++SSEALEAARI  NKYM K  GKD FHLRVR HPFHV RINKMLSCAGADRLQTGMRGA+GKPQ                  +G V   HA E  R   +  F G + ++ ++K GFT+
Sbjct:    1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEGNV--KHAIEAFRRA-KFKFPGRQIIVSSRKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10L_MACFA (60S ribosomal protein L10-like OS=Macaca fascicularis GN=RPL10L PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.368e-53
Identity = 109/178 (61.24%), Postives = 124/178 (69.66%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  G+D FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNKEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_MACFA (60S ribosomal protein L10 OS=Macaca fascicularis GN=RPL10 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.618e-52
Identity = 109/178 (61.24%), Postives = 123/178 (69.10%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPAR YR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP C H+VS E E +SSEALEAARI  NKYM K  GKD FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARRYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNKEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10L_HUMAN (60S ribosomal protein L10-like OS=Homo sapiens GN=RPL10L PE=1 SV=3)

HSP 1 Score: 204.912 bits (520), Expect = 5.833e-52
Identity = 108/178 (60.67%), Postives = 123/178 (69.10%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFTQ 580
            MGRRPARCYR  KNKPYPKSRFCRGVPD KIRI+D+G KK  VDEFP   H+VS E E +SSEALEAARI  NKYM K  G+D FH+RVR+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQ                    +    H  E LR   +  F G + + ++KK GFT+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLGGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIR--TKLQNEEHVIEALRRA-KFKFPGRQKIHISKKWGFTK 175
[Close]
BLAST of EY691852 vs. ExPASy Swiss-Prot
Match: RL10_YEAST (60S ribosomal protein L10 OS=Saccharomyces cerevisiae GN=RPL10 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.895e-51
Identity = 114/196 (58.16%), Postives = 128/196 (65.31%), Query Frame = 2 
Query:   47 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQXXXXXXXXXXXXXXXXPLQGIVTAPHAQEGLRPG*RSGF*GVKGLLVTKKRGFT-----QHLPRR*FGSGKTD 619
            M RRPARCYR  KNKPYPKSR+ R VPD KIRIYD+G KK  VDEFP CVHLVS E E +SSEALEAARI  NKYM   +G+DAFHLRVRVHPFHVLRINKMLSCAGADRLQ GMRGA+GKP                             EGLR   R  F G + ++++KK GFT     ++L +R  G  K D
Sbjct:    1 MARRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQLSSEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWGKPHGLAARVDIGQIIFSVRTKDS--NKDVVVEGLRRA-RYKFPGQQKIILSKKWGFTNLDRPEYLKKREAGEVKDD 193
The following BLAST results are available for this feature:
BLAST of EY691852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
RL10_HUMAN1.063e-5361.8060S ribosomal protein L10 OS=Homo sapiens GN=RPL10... [more]
RL10_DICDI1.063e-5360.2260S ribosomal protein L10 OS=Dictyostelium discoid... [more]
RL10_BOVIN1.063e-5361.8060S ribosomal protein L10 OS=Bos taurus GN=RPL10 P... [more]
RL10L_MOUSE1.063e-5361.8060S ribosomal protein L10-like OS=Mus musculus GN=... [more]
RL10L_BOVIN1.063e-5361.8060S ribosomal protein L10-like OS=Bos taurus GN=RP... [more]
RL10_CAEEL1.388e-5361.8060S ribosomal protein L10 OS=Caenorhabditis elegan... [more]
RL10L_MACFA2.368e-5361.2460S ribosomal protein L10-like OS=Macaca fascicula... [more]
RL10_MACFA2.618e-5261.2460S ribosomal protein L10 OS=Macaca fascicularis G... [more]
RL10L_HUMAN5.833e-5260.6760S ribosomal protein L10-like OS=Homo sapiens GN=... [more]
RL10_YEAST2.895e-5158.1660S ribosomal protein L10 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-027-D05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691852 ID=EY691852; Name=EY691852; organism=Citrus sinensis; type=EST; length=984bp
CCACGCGTCCGGAGAGAATAGCTGAGACCGAACACGAACGCTCGCCATGG
GAAGAAGACCGGCAAGGTGTTACCGCCAAATCAAGAACAAACCCTACCCA
AAGTCCCGCTTTTGCCGCGGTGTCCCCGATCCCAAGATCAGAATCTACGA
TGTCGGGATGAAGAAGAAAGGCGTCGACGAGTTCCCCTTCTGCGTTCACC
TCGTCAGTTGGGAGAAGGAGAACGTGTCGAGCGAGGCCTTGGAAGCTGCC
CGTATCGCTTGCAACAAGTACATGGCCAAGTACGCCGGCAAGGATGCTTT
CCATTTGCGAGTGAGGGTGCACCCCTTCCATGTTCTGCGTATTAACAAGA
TGCTTTCGTGTGCTGGGGCTGATAGGCTCCAGACTGGAATGAGGGGTGCT
TTTGGAAAGCCCCAAGGAACCTGTGGCTCGTGTTTGCTATCGGGCAGGTC
TTTGCTTTTCTGTCCGTTGCAAGGGATAGTAACAGCCCCCCATGCTCAGG
AGGGCCTTCGCCCTGGCTAACGTTCAGGTTTCTGAGGCGTCAAAGGATTA
TTGGTCACCAAGAAAAGGGGATTTACCCAGCATCTACCGAGGAGATAATT
CGGGAGTGGGAAGACAGATATAAAGGGATAGTTACATGAAGGGTTGTCAA
GGGTCACTTTCTCCGGATTAATGGTACAATTGGATGATCCTACCACCAGT
ACAATCTATCATTGGGAAATACAGGACAAGAGAATTATTGTAAATACAAC
TAATAAGTGAGGGAAGTGTCGGCGAGCTCGTGAATAAAAATCATACTACG
CTCATGTAATTAACGATGGTACGTGAAAGAGTGCACGCAAGAGGAATTAA
GATGTAAAATTAAAAGAGGGAAATTATAACGTTTAATTGAGAGATTCATA
TGGAATAACATTACCTATGAAGGCAGATAATCGAAGAAAAAAGGAACTGG
AATCTATTGAAGAAGTAATAACAACGGACAAATA
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