EY691684

Overview
NameEY691684
Unique NameEY691684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_ALHEH (NADH-quinone oxidoreductase subunit B OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=nuoB PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.413e-57
Identity = 104/140 (74.29%), Postives = 116/140 (82.86%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKM 718
            FV +  D V+N+ R GS+WPM+FGLACCAVEMM  GAARYDLDRFGIIFRPSPRQSDVM+VAGTL NKMAPALRKVYDQMP+PRWVISMGSCAN              CDR+VPVD+YVPGCPPTAEAL+ GI+QLQKK+
Sbjct:   11 FVTTSADKVINWARTGSMWPMTFGLACCAVEMMQAGAARYDLDRFGIIFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRVVPVDVYVPGCPPTAEALIWGIMQLQKKI 150
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB1_CHRVO (NADH-quinone oxidoreductase subunit B 1 OS=Chromobacterium violaceum GN=nuoB1 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.413e-57
Identity = 103/142 (72.54%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++NY R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEALL GI+QLQ K+ R
Sbjct:   11 FVTTTADKLINYTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIKR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_POLSQ (NADH-quinone oxidoreductase subunit B OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.457e-57
Identity = 102/142 (71.83%), Postives = 117/142 (82.39%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GA+RYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPALRKVYDQMP+PRWVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+ GI+QLQ K+ R
Sbjct:   11 FVTTTADQLINWTRNGSLWPMTFGLACCAVEMMHAGASRYDLDRFGVVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHNSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGIIQLQSKIAR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_POLNS (NADH-quinone oxidoreductase subunit B OS=Polynucleobacter necessarius (strain STIR1) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.457e-57
Identity = 102/142 (71.83%), Postives = 117/142 (82.39%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GA+RYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPALRKVYDQMP+PRWVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+ GI+QLQ K+ R
Sbjct:   11 FVTTTADQLINWTRNGSLWPMTFGLACCAVEMMHAGASRYDLDRFGVVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHNSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGIIQLQSKIAR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_LEGPL (NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila (strain Lens) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.457e-57
Identity = 104/143 (72.73%), Postives = 118/143 (82.52%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRR 727
            F ++ ++ +V + R GS+WPM+FGLACCAVEMMH GAARYDLDRFGIIFRPSPRQSDVM+VAGTL NKMAPALRKVYDQMP+PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEALL GI+QLQ K+ R+
Sbjct:   11 FELTTVEKLVGWARSGSMWPMTFGLACCAVEMMHVGAARYDLDRFGIIFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIRRK 153
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_LEGPH (NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.457e-57
Identity = 104/143 (72.73%), Postives = 118/143 (82.52%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRR 727
            F ++ ++ +V + R GS+WPM+FGLACCAVEMMH GAARYDLDRFGIIFRPSPRQSDVM+VAGTL NKMAPALRKVYDQMP+PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEALL GI+QLQ K+ R+
Sbjct:   11 FELTTVEKLVGWARSGSMWPMTFGLACCAVEMMHVGAARYDLDRFGIIFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIRRK 153
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_LEGPC (NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila (strain Corby) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.457e-57
Identity = 104/143 (72.73%), Postives = 118/143 (82.52%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRR 727
            F ++ ++ +V + R GS+WPM+FGLACCAVEMMH GAARYDLDRFGIIFRPSPRQSDVM+VAGTL NKMAPALRKVYDQMP+PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEALL GI+QLQ K+ R+
Sbjct:   11 FELTTVEKLVGWARSGSMWPMTFGLACCAVEMMHVGAARYDLDRFGIIFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIRRK 153
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_LEGPA (NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila (strain Paris) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.457e-57
Identity = 104/143 (72.73%), Postives = 118/143 (82.52%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRR 727
            F ++ ++ +V + R GS+WPM+FGLACCAVEMMH GAARYDLDRFGIIFRPSPRQSDVM+VAGTL NKMAPALRKVYDQMP+PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEALL GI+QLQ K+ R+
Sbjct:   11 FELTTVEKLVGWARSGSMWPMTFGLACCAVEMMHVGAARYDLDRFGIIFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIRRK 153
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_DECAR (NADH-quinone oxidoreductase subunit B OS=Dechloromonas aromatica (strain RCB) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.457e-57
Identity = 102/142 (71.83%), Postives = 117/142 (82.39%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++NY+R GS+WPM+FGLACCAVEM+H G +RYDLDRFG++FRPSPRQSDVM+VAGTLTNKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+ GI+QLQ K+ R
Sbjct:   11 FVTTTADKLINYMRTGSLWPMTFGLACCAVEMIHAGVSRYDLDRFGVVFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGIIQLQNKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_VARPS (NADH-quinone oxidoreductase subunit B OS=Variovorax paradoxus (strain S110) GN=nuoB PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.821e-57
Identity = 101/142 (71.13%), Postives = 118/142 (83.10%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D VVN+ + GS+WPM+FGLACCAVEMMH GAARYD+DRFG++FRPSPRQSD+M+VAGTL NKMAPALRKVYDQMP+PRWV+SMGSCAN              CDRIVPVD+YVPGCPPTAEALL G++QLQ+K+ R
Sbjct:   11 FVTTTYDSVVNWAKTGSLWPMTFGLACCAVEMMHAGAARYDIDRFGMLFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQMPEPRWVLSMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVIQLQQKIRR 152
The following BLAST results are available for this feature:
BLAST of EY691684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOB_ALHEH3.413e-5774.29NADH-quinone oxidoreductase subunit B OS=Alkalilim... [more]
NUOB1_CHRVO3.413e-5772.54NADH-quinone oxidoreductase subunit B 1 OS=Chromob... [more]
NUOB_POLSQ4.457e-5771.83NADH-quinone oxidoreductase subunit B OS=Polynucle... [more]
NUOB_POLNS4.457e-5771.83NADH-quinone oxidoreductase subunit B OS=Polynucle... [more]
NUOB_LEGPL4.457e-5772.73NADH-quinone oxidoreductase subunit B OS=Legionell... [more]
NUOB_LEGPH4.457e-5772.73NADH-quinone oxidoreductase subunit B OS=Legionell... [more]
NUOB_LEGPC4.457e-5772.73NADH-quinone oxidoreductase subunit B OS=Legionell... [more]
NUOB_LEGPA4.457e-5772.73NADH-quinone oxidoreductase subunit B OS=Legionell... [more]
NUOB_DECAR4.457e-5771.83NADH-quinone oxidoreductase subunit B OS=Dechlorom... [more]
NUOB_VARPS5.821e-5771.13NADH-quinone oxidoreductase subunit B OS=Variovora... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-107-A04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691684 ID=EY691684; Name=EY691684; organism=Citrus sinensis; type=EST; length=961bp
ATCAATTTCTCTCTCGCTTTGCCCCCGTGTGAGAAAACTAAACCAAACCA
AACCAAACCCCACCCCACAACCCCCAAAACACAAGCCCAAAAAAAAAAAA
ACTATGGCGGTACTCACCAAAAACACTGCCACGCGCCTCCCTCTCCTCCT
CTCGCAACGCGCCGCCTGTCTCCACACGACCGTCCCCTCTCTCTCCTCGG
CCTCCGGCTCCTCCTCCTCCTCCTCGCAGCCCACCTCCTACGCTCGCCCT
CCACCGCCCTCGACCACAAGTCCAGGCGGTATCTCAAAGACGGCGGAATT
CGTGATCTCTAAATTGGATGATGTCGTCAACTATATTCGTCGCGGCTCCA
TCTGGCCCATGTCCTTCGGGCTGGCCTGCTGCGCCGTCGAGATGATGCAC
ACCGGTGCTGCTCGTTACGATTTAGATCGATTCGGTATCATTTTCAGGCC
CAGCCCTCGCCAATCCGATGTCATGGTCGTAGCTGGCACACTCACAAACA
AGATGGCCCCTGCCCTTCGCAAGGTTTATGATCAAATGCCAGATCCTAGG
TGGGTCATTTCTATGGGAAGCTGTGCAAATGGTGGTGGATATTATCATTA
CTCTTACTCTGTTGTTCGGGGTTGCGATAGGATTGTCCCCGTGGACATCT
ATGTTCCGGGCTGCCCTCCTACTGCTGAGGCCCTACTCTAAGGAATTCTC
CAACTGCAAAAAAAAATGAACAGGCGCAGAGATTTGTATTATTGGGGGAA
CAAAGGAAGAAAGCTCAGGGGGGTCCTTGGGAAGTAAACCTCAAATAATA
TGTTTTGAAGTGAAAAAAAAAAACAACTTTGGCCCGGGGGGGGGAACCTT
GTTTAAGGGGAATTTTTAAAAGGGAAAAAGATGTTTTTAAAAAGGGAAAA
AAAAAAATAATGGGATCCCCCAAACCTCGTTGGGGTAATTTCCCAAAAAG
GGGTTTTGTAA
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