EY691684

Overview
NameEY691684
Unique NameEY691684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_THICR (NADH-quinone oxidoreductase subunit B OS=Thiomicrospira crunogena (strain XCL-2) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.212e-56
Identity = 103/141 (73.05%), Postives = 115/141 (81.56%), Query Frame = 2
Query:  302 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            V +  D ++N+ R GS+WPM+FGLACCAVEMMH GA+RYDLDRFGIIFRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEALL GI+QLQ K+ R
Sbjct:   12 VTTSADKLINWARTGSLWPMTFGLACCAVEMMHAGASRYDLDRFGIIFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIKR 152          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_NITEC (NADH-quinone oxidoreductase subunit B OS=Nitrosomonas eutropha (strain C91) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.212e-56
Identity = 105/142 (73.94%), Postives = 117/142 (82.39%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV + LD ++N+ R GS+WPM+FGLACCAVEMM TGA+RYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGCPPTAEALL GI+QLQ K+ R
Sbjct:   11 FVTTNLDSLINWGRTGSMWPMTFGLACCAVEMMQTGASRYDLDRFGIVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNKIWR 152          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURXL (NADH-quinone oxidoreductase subunit B OS=Burkholderia xenovorans (strain LB400) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.212e-56
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURPP (NADH-quinone oxidoreductase subunit B OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.212e-56
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURP8 (NADH-quinone oxidoreductase subunit B OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.212e-56
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_XANOR (NADH-quinone oxidoreductase subunit B OS=Xanthomonas oryzae pv. oryzae GN=nuoB PE=3 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.889e-56
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRRRDL 736
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GA+R DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+ GILQLQKK+ R + +
Sbjct:   37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGASRLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_XANOP (NADH-quinone oxidoreductase subunit B OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.889e-56
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRRRDL 736
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GA+R DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+ GILQLQKK+ R + +
Sbjct:   35 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGASRLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 180          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_XANOM (NADH-quinone oxidoreductase subunit B OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=nuoB PE=3 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.889e-56
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRRRDL 736
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GA+R DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+ GILQLQKK+ R + +
Sbjct:   37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGASRLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_XANC5 (NADH-quinone oxidoreductase subunit B OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.889e-56
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRRRDL 736
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GA+R DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+ GILQLQKK+ R + +
Sbjct:   37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGASRLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_XANAC (NADH-quinone oxidoreductase subunit B OS=Xanthomonas axonopodis pv. citri GN=nuoB PE=3 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.889e-56
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRRRDL 736
            +V + +D ++N+ R GS+WPM+FGLACCAVEMMH GA+R DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+ GILQLQKK+ R + +
Sbjct:   37 YVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGASRLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQKKIWRTQTI 182          
The following BLAST results are available for this feature:
BLAST of EY691684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOB_THICR2.212e-5673.05NADH-quinone oxidoreductase subunit B OS=Thiomicro... [more]
NUOB_NITEC2.212e-5673.94NADH-quinone oxidoreductase subunit B OS=Nitrosomo... [more]
NUOB_BURXL2.212e-5671.13NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURPP2.212e-5671.13NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURP82.212e-5671.13NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_XANOR2.889e-5669.86NADH-quinone oxidoreductase subunit B OS=Xanthomon... [more]
NUOB_XANOP2.889e-5669.86NADH-quinone oxidoreductase subunit B OS=Xanthomon... [more]
NUOB_XANOM2.889e-5669.86NADH-quinone oxidoreductase subunit B OS=Xanthomon... [more]
NUOB_XANC52.889e-5669.86NADH-quinone oxidoreductase subunit B OS=Xanthomon... [more]
NUOB_XANAC2.889e-5669.86NADH-quinone oxidoreductase subunit B OS=Xanthomon... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-107-A04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691684 ID=EY691684; Name=EY691684; organism=Citrus sinensis; type=EST; length=961bp
ATCAATTTCTCTCTCGCTTTGCCCCCGTGTGAGAAAACTAAACCAAACCA
AACCAAACCCCACCCCACAACCCCCAAAACACAAGCCCAAAAAAAAAAAA
ACTATGGCGGTACTCACCAAAAACACTGCCACGCGCCTCCCTCTCCTCCT
CTCGCAACGCGCCGCCTGTCTCCACACGACCGTCCCCTCTCTCTCCTCGG
CCTCCGGCTCCTCCTCCTCCTCCTCGCAGCCCACCTCCTACGCTCGCCCT
CCACCGCCCTCGACCACAAGTCCAGGCGGTATCTCAAAGACGGCGGAATT
CGTGATCTCTAAATTGGATGATGTCGTCAACTATATTCGTCGCGGCTCCA
TCTGGCCCATGTCCTTCGGGCTGGCCTGCTGCGCCGTCGAGATGATGCAC
ACCGGTGCTGCTCGTTACGATTTAGATCGATTCGGTATCATTTTCAGGCC
CAGCCCTCGCCAATCCGATGTCATGGTCGTAGCTGGCACACTCACAAACA
AGATGGCCCCTGCCCTTCGCAAGGTTTATGATCAAATGCCAGATCCTAGG
TGGGTCATTTCTATGGGAAGCTGTGCAAATGGTGGTGGATATTATCATTA
CTCTTACTCTGTTGTTCGGGGTTGCGATAGGATTGTCCCCGTGGACATCT
ATGTTCCGGGCTGCCCTCCTACTGCTGAGGCCCTACTCTAAGGAATTCTC
CAACTGCAAAAAAAAATGAACAGGCGCAGAGATTTGTATTATTGGGGGAA
CAAAGGAAGAAAGCTCAGGGGGGTCCTTGGGAAGTAAACCTCAAATAATA
TGTTTTGAAGTGAAAAAAAAAAACAACTTTGGCCCGGGGGGGGGAACCTT
GTTTAAGGGGAATTTTTAAAAGGGAAAAAGATGTTTTTAAAAAGGGAAAA
AAAAAAATAATGGGATCCCCCAAACCTCGTTGGGGTAATTTCCCAAAAAG
GGGTTTTGTAA
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