EY691684

Overview
NameEY691684
Unique NameEY691684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_RALSO (NADH-quinone oxidoreductase subunit B OS=Ralstonia solanacearum GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.889e-56
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GA+RYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ GI+QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGASRYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_RALPJ (NADH-quinone oxidoreductase subunit B OS=Ralstonia pickettii (strain 12J) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.889e-56
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GA+RYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ GI+QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGASRYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGIIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_LARHH (NADH-quinone oxidoreductase subunit B OS=Laribacter hongkongensis (strain HLHK9) GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.889e-56
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            F+ +  D V+N+ R GS+WPM+FGLACCAVEMMH GA+RYDLDRFGI+FRPSPRQSD+M+VAGTL NKMAPALRKVYDQM +PRWV+SMGSCAN              CDRIVPVD+YVPGCPPTAEALL GI+QLQ K+ R
Sbjct:   11 FITTSADKVLNWTRTGSLWPMTFGLACCAVEMMHAGASRYDLDRFGIVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQMAEPRWVLSMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIKR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_HERAR (NADH-quinone oxidoreductase subunit B OS=Herminiimonas arsenicoxydans GN=nuoB PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.889e-56
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GA+RYD+DRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEALL GI+QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSMWPMTFGLACCAVEMMHAGASRYDMDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIMQLQNKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB1_AZOSB (NADH-quinone oxidoreductase subunit B 1 OS=Azoarcus sp. (strain BH72) GN=nuoB1 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.889e-56
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV + LD V+N+ R GS+WPM+FGLACCAVEM+H G +RYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEALL GI+QLQ K+ R
Sbjct:   11 FVTTSLDAVINWTRTGSLWPMTFGLACCAVEMIHAGCSRYDLDRFGVVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIKR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_POLNA (NADH-quinone oxidoreductase subunit B OS=Polaromonas naphthalenivorans (strain CJ2) GN=nuoB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 101/142 (71.13%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D VVN+ + GS+WPM+FGLACCAVEMMH GAARYD+DRFG++FRPSPRQSD+M+VAGTL NKM PALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEALL GI+QLQ+K+ R
Sbjct:   11 FVTTSYDSVVNWAKTGSLWPMTFGLACCAVEMMHAGAARYDIDRFGMLFRPSPRQSDLMIVAGTLCNKMGPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQQKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURVG (NADH-quinone oxidoreductase subunit B OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=nuoB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURTA (NADH-quinone oxidoreductase subunit B OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=nuoB PE=3 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURS3 (NADH-quinone oxidoreductase subunit B OS=Burkholderia sp. (strain 383) GN=nuoB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURM1 (NADH-quinone oxidoreductase subunit B OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=nuoB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
The following BLAST results are available for this feature:
BLAST of EY691684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOB_RALSO2.889e-5671.13NADH-quinone oxidoreductase subunit B OS=Ralstonia... [more]
NUOB_RALPJ2.889e-5671.13NADH-quinone oxidoreductase subunit B OS=Ralstonia... [more]
NUOB_LARHH2.889e-5671.13NADH-quinone oxidoreductase subunit B OS=Laribacte... [more]
NUOB_HERAR2.889e-5671.13NADH-quinone oxidoreductase subunit B OS=Herminiim... [more]
NUOB1_AZOSB2.889e-5671.13NADH-quinone oxidoreductase subunit B 1 OS=Azoarcu... [more]
NUOB_POLNA4.928e-5671.13NADH-quinone oxidoreductase subunit B OS=Polaromon... [more]
NUOB_BURVG4.928e-5670.42NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURTA4.928e-5670.42NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURS34.928e-5670.42NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURM14.928e-5670.42NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-107-A04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691684 ID=EY691684; Name=EY691684; organism=Citrus sinensis; type=EST; length=961bp
ATCAATTTCTCTCTCGCTTTGCCCCCGTGTGAGAAAACTAAACCAAACCA
AACCAAACCCCACCCCACAACCCCCAAAACACAAGCCCAAAAAAAAAAAA
ACTATGGCGGTACTCACCAAAAACACTGCCACGCGCCTCCCTCTCCTCCT
CTCGCAACGCGCCGCCTGTCTCCACACGACCGTCCCCTCTCTCTCCTCGG
CCTCCGGCTCCTCCTCCTCCTCCTCGCAGCCCACCTCCTACGCTCGCCCT
CCACCGCCCTCGACCACAAGTCCAGGCGGTATCTCAAAGACGGCGGAATT
CGTGATCTCTAAATTGGATGATGTCGTCAACTATATTCGTCGCGGCTCCA
TCTGGCCCATGTCCTTCGGGCTGGCCTGCTGCGCCGTCGAGATGATGCAC
ACCGGTGCTGCTCGTTACGATTTAGATCGATTCGGTATCATTTTCAGGCC
CAGCCCTCGCCAATCCGATGTCATGGTCGTAGCTGGCACACTCACAAACA
AGATGGCCCCTGCCCTTCGCAAGGTTTATGATCAAATGCCAGATCCTAGG
TGGGTCATTTCTATGGGAAGCTGTGCAAATGGTGGTGGATATTATCATTA
CTCTTACTCTGTTGTTCGGGGTTGCGATAGGATTGTCCCCGTGGACATCT
ATGTTCCGGGCTGCCCTCCTACTGCTGAGGCCCTACTCTAAGGAATTCTC
CAACTGCAAAAAAAAATGAACAGGCGCAGAGATTTGTATTATTGGGGGAA
CAAAGGAAGAAAGCTCAGGGGGGTCCTTGGGAAGTAAACCTCAAATAATA
TGTTTTGAAGTGAAAAAAAAAAACAACTTTGGCCCGGGGGGGGGAACCTT
GTTTAAGGGGAATTTTTAAAAGGGAAAAAGATGTTTTTAAAAAGGGAAAA
AAAAAAATAATGGGATCCCCCAAACCTCGTTGGGGTAATTTCCCAAAAAG
GGGTTTTGTAA
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