EY691684

Overview
NameEY691684
Unique NameEY691684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURCM (NADH-quinone oxidoreductase subunit B OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=nuoB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURCJ (NADH-quinone oxidoreductase subunit B OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=nuoB PE=3 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURCH (NADH-quinone oxidoreductase subunit B OS=Burkholderia cenocepacia (strain HI2424) GN=nuoB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURCC (NADH-quinone oxidoreductase subunit B OS=Burkholderia cenocepacia (strain MC0-3) GN=nuoB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURCA (NADH-quinone oxidoreductase subunit B OS=Burkholderia cenocepacia (strain AU 1054) GN=nuoB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_BURA4 (NADH-quinone oxidoreductase subunit B OS=Burkholderia ambifaria (strain MC40-6) GN=nuoB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB2_NITOC (NADH-quinone oxidoreductase subunit B 2 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=nuoB2 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 102/141 (72.34%), Postives = 115/141 (81.56%), Query Frame = 2 
Query:  302 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            V +  D ++N+ R GS+WPM+FGLACCAVEMMH GA+RYD+DRFG+IFRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGCPPTAEALL GI+QLQ K+ R
Sbjct:   12 VTTTADKLINWARTGSLWPMTFGLACCAVEMMHAGASRYDMDRFGVIFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMSEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQNKIKR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB1_BURPS (NADH-quinone oxidoreductase subunit B 1 OS=Burkholderia pseudomallei GN=nuoB1 PE=3 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB1_BURP6 (NADH-quinone oxidoreductase subunit B 1 OS=Burkholderia pseudomallei (strain 668) GN=nuoB1 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
[Close]
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB1_BURP1 (NADH-quinone oxidoreductase subunit B 1 OS=Burkholderia pseudomallei (strain 1710b) GN=nuoB1 PE=3 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 4.928e-56
Identity = 100/142 (70.42%), Postives = 116/142 (81.69%), Query Frame = 2 
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALR+VYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQ K+ R
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRRVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGVIQLQAKIRR 152
The following BLAST results are available for this feature:
BLAST of EY691684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOB_BURCM4.928e-5670.42NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURCJ4.928e-5670.42NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURCH4.928e-5670.42NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURCC4.928e-5670.42NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURCA4.928e-5670.42NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURA44.928e-5670.42NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB2_NITOC4.928e-5672.34NADH-quinone oxidoreductase subunit B 2 OS=Nitroso... [more]
NUOB1_BURPS4.928e-5670.42NADH-quinone oxidoreductase subunit B 1 OS=Burkhol... [more]
NUOB1_BURP64.928e-5670.42NADH-quinone oxidoreductase subunit B 1 OS=Burkhol... [more]
NUOB1_BURP14.928e-5670.42NADH-quinone oxidoreductase subunit B 1 OS=Burkhol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-107-A04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691684 ID=EY691684; Name=EY691684; organism=Citrus sinensis; type=EST; length=961bp
ATCAATTTCTCTCTCGCTTTGCCCCCGTGTGAGAAAACTAAACCAAACCA
AACCAAACCCCACCCCACAACCCCCAAAACACAAGCCCAAAAAAAAAAAA
ACTATGGCGGTACTCACCAAAAACACTGCCACGCGCCTCCCTCTCCTCCT
CTCGCAACGCGCCGCCTGTCTCCACACGACCGTCCCCTCTCTCTCCTCGG
CCTCCGGCTCCTCCTCCTCCTCCTCGCAGCCCACCTCCTACGCTCGCCCT
CCACCGCCCTCGACCACAAGTCCAGGCGGTATCTCAAAGACGGCGGAATT
CGTGATCTCTAAATTGGATGATGTCGTCAACTATATTCGTCGCGGCTCCA
TCTGGCCCATGTCCTTCGGGCTGGCCTGCTGCGCCGTCGAGATGATGCAC
ACCGGTGCTGCTCGTTACGATTTAGATCGATTCGGTATCATTTTCAGGCC
CAGCCCTCGCCAATCCGATGTCATGGTCGTAGCTGGCACACTCACAAACA
AGATGGCCCCTGCCCTTCGCAAGGTTTATGATCAAATGCCAGATCCTAGG
TGGGTCATTTCTATGGGAAGCTGTGCAAATGGTGGTGGATATTATCATTA
CTCTTACTCTGTTGTTCGGGGTTGCGATAGGATTGTCCCCGTGGACATCT
ATGTTCCGGGCTGCCCTCCTACTGCTGAGGCCCTACTCTAAGGAATTCTC
CAACTGCAAAAAAAAATGAACAGGCGCAGAGATTTGTATTATTGGGGGAA
CAAAGGAAGAAAGCTCAGGGGGGTCCTTGGGAAGTAAACCTCAAATAATA
TGTTTTGAAGTGAAAAAAAAAAACAACTTTGGCCCGGGGGGGGGAACCTT
GTTTAAGGGGAATTTTTAAAAGGGAAAAAGATGTTTTTAAAAAGGGAAAA
AAAAAAATAATGGGATCCCCCAAACCTCGTTGGGGTAATTTCCCAAAAAG
GGGTTTTGTAA
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