EY691684

Overview
NameEY691684
Unique NameEY691684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_FRATH (NADH-quinone oxidoreductase subunit B OS=Francisella tularensis subsp. holarctica (strain LVS) GN=nuoB PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 6.436e-56
Identity = 100/143 (69.93%), Postives = 118/143 (82.52%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRR 727
            F+ +  D ++N++R GS+WP++ GLACCAVEMMH GAARYDLDRFGI+FRPSPRQSDV++VAGTL NKMAPALR+VYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+ GI+QLQ K+ R+
Sbjct:   10 FITASADALINWVRTGSLWPVTTGLACCAVEMMHAGAARYDLDRFGIVFRPSPRQSDVLIVAGTLCNKMAPALRQVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGIIQLQNKIIRK 152          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_FRATF (NADH-quinone oxidoreductase subunit B OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=nuoB PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 6.436e-56
Identity = 100/143 (69.93%), Postives = 118/143 (82.52%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRR 727
            F+ +  D ++N++R GS+WP++ GLACCAVEMMH GAARYDLDRFGI+FRPSPRQSDV++VAGTL NKMAPALR+VYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+ GI+QLQ K+ R+
Sbjct:   10 FITASADALINWVRTGSLWPVTTGLACCAVEMMHAGAARYDLDRFGIVFRPSPRQSDVLIVAGTLCNKMAPALRQVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGIIQLQNKIIRK 152          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_FRAT1 (NADH-quinone oxidoreductase subunit B OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=nuoB PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 6.436e-56
Identity = 100/143 (69.93%), Postives = 118/143 (82.52%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRR 727
            F+ +  D ++N++R GS+WP++ GLACCAVEMMH GAARYDLDRFGI+FRPSPRQSDV++VAGTL NKMAPALR+VYDQMPDP+WVISMGSCAN              CDRIVPVDIYVPGCPPTAEAL+ GI+QLQ K+ R+
Sbjct:   10 FITASADALINWVRTGSLWPVTTGLACCAVEMMHAGAARYDLDRFGIVFRPSPRQSDVLIVAGTLCNKMAPALRQVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGIIQLQNKIIRK 152          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_FRAP2 (NADH-quinone oxidoreductase subunit B OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=nuoB PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 8.406e-56
Identity = 99/143 (69.23%), Postives = 118/143 (82.52%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRR 727
            F+ +  D ++N++R GS+WP++ GLACCAVEMMH GAARYDLDRFGI+FRPSPRQSDV++VAGTL NKMAPALR+VYDQMPDP+WVISMGSCAN              CDRI+PVDIYVPGCPPTAEAL+ GI+QLQ K+ R+
Sbjct:   10 FITASADALINWVRTGSLWPVTTGLACCAVEMMHAGAARYDLDRFGIVFRPSPRQSDVLIVAGTLCNKMAPALRQVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALVYGIIQLQNKIIRK 152          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NDUS7_NEUCR (NADH-ubiquinone oxidoreductase 19.3 kDa subunit, mitochondrial OS=Neurospora crassa GN=G17A4.170 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.434e-55
Identity = 102/159 (64.15%), Postives = 117/159 (73.58%), Query Frame = 2
Query:  278 GISKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRRRDLYYWGNK 754
            G     ++ ++ LD +VN+ R+ S+WPM+FGLACCAVEMMH    RYD DR GIIFR SPRQSDVM+VAGTLTNKMAPALR+VYDQMPDPRWVISMGSCAN              CDRIVPVDIYVPGCPPT+EAL+ GI QLQ+KM   +    W  K
Sbjct:   68 GTKGAVQYALTTLDSIVNWARQSSLWPMTFGLACCAVEMMHLSTPRYDQDRLGIIFRASPRQSDVMIVAGTLTNKMAPALRQVYDQMPDPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTSEALMYGIFQLQRKMRNTKITRMWYRK 226          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_POLSJ (NADH-quinone oxidoreductase subunit B OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=nuoB PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.873e-55
Identity = 99/142 (69.72%), Postives = 116/142 (81.69%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNR 724
            F+ +  D VVN+ + GS+WPM+FGLACCAVEMMH GAARYD+DRFG++FRPSPRQSD+M+VAGTL NKM PALRKVYDQM +PRWV+SMGSCAN              CDRIVPVD+YVPGCPPTAEALL GI+QLQ+K+ R
Sbjct:   11 FMTTSYDSVVNWAKTGSLWPMTFGLACCAVEMMHAGAARYDMDRFGMLFRPSPRQSDLMIVAGTLCNKMGPALRKVYDQMSEPRWVLSMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQQKIRR 152          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_LEPCP (NADH-quinone oxidoreductase subunit B OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=nuoB PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.873e-55
Identity = 98/146 (67.12%), Postives = 118/146 (80.82%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRRRDL 736
            FV + +D ++N+ + GS+WPM+FGLACCAVEMMH GA+RYD+DRFG++FRPSPRQSD+M+VAGTL NKMAPALRKVYDQM +PRWV+SMGSCAN              CDR+VPVD+YVPGCPPTAEALL GILQLQ K+ R   +
Sbjct:   11 FVTTSVDTLINWSKTGSLWPMTFGLACCAVEMMHAGASRYDIDRFGMLFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQMAEPRWVLSMGSCANGGGYYHYSYSVVRGCDRVVPVDVYVPGCPPTAEALLYGILQLQAKIRRENTI 156          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NDUS7_DICDI (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Dictyostelium discoideum GN=ndufs7 PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.873e-55
Identity = 102/153 (66.67%), Postives = 121/153 (79.08%), Query Frame = 2
Query:  296 EFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRRRDLYYWGNK 754
            E VISK+D +VN+ R GS+WPM+FGLACCAVEMM   AARYD+DRFG+I R SPRQSD ++VAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN              CDRI+PVD+Y+PGCPPTAEA + GILQLQKK+ R ++L  W  K
Sbjct:   26 EVVISKIDGLVNWARTGSLWPMTFGLACCAVEMMQGYAARYDMDRFGVIPRASPRQSDCIIVAGTLTNKMAPALRKVYDQMPNPRYVVSMGSCANGGGYYHYSYSVVRGCDRIIPVDVYIPGCPPTAEAFVYGILQLQKKIGREQNLLTWWRK 178          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_RICTY (NADH-quinone oxidoreductase subunit B OS=Rickettsia typhi GN=nuoB PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.446e-55
Identity = 97/148 (65.54%), Postives = 120/148 (81.08%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRRRDLYY 742
            F++SK+D+V+++ R  S+WPM+FGLACCAVEMM   A+RYD+DRFG++FRPSPRQSD+M+VAGTLTNKMAPALRKVYDQM +P+WV+SMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQKK+ R     Y
Sbjct:   21 FLLSKIDEVISWARANSLWPMTFGLACCAVEMMQAAASRYDMDRFGMLFRPSPRQSDLMIVAGTLTNKMAPALRKVYDQMTEPKWVLSMGSCANGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQKKIKRTTGFKY 168          
BLAST of EY691684 vs. ExPASy Swiss-Prot
Match: NUOB_RICB8 (NADH-quinone oxidoreductase subunit B OS=Rickettsia bellii (strain OSU 85-389) GN=nuoB PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.446e-55
Identity = 98/152 (64.47%), Postives = 120/152 (78.95%), Query Frame = 2
Query:  299 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALL*GILQLQKKMNRRRDLYYWGNK 754
            F+++K+DDV+ + R  S+WPM+FGLACCAVEMM   A+RYD+DRFG++FRPSPRQSD+M+VAGTLTNKMAPALRKVYDQM +P+WV+SMGSCAN              CDRIVPVD+YVPGCPPTAEAL+ G++QLQKK+ R     Y   K
Sbjct:   21 FLLTKVDDVIGWARSNSLWPMTFGLACCAVEMMQAAASRYDMDRFGMLFRPSPRQSDLMIVAGTLTNKMAPALRKVYDQMAEPKWVLSMGSCANGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQKKIKRTTGFKYDARK 172          
The following BLAST results are available for this feature:
BLAST of EY691684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOB_FRATH6.436e-5669.93NADH-quinone oxidoreductase subunit B OS=Francisel... [more]
NUOB_FRATF6.436e-5669.93NADH-quinone oxidoreductase subunit B OS=Francisel... [more]
NUOB_FRAT16.436e-5669.93NADH-quinone oxidoreductase subunit B OS=Francisel... [more]
NUOB_FRAP28.406e-5669.23NADH-quinone oxidoreductase subunit B OS=Francisel... [more]
NDUS7_NEUCR1.434e-5564.15NADH-ubiquinone oxidoreductase 19.3 kDa subunit, m... [more]
NUOB_POLSJ1.873e-5569.72NADH-quinone oxidoreductase subunit B OS=Polaromon... [more]
NUOB_LEPCP1.873e-5567.12NADH-quinone oxidoreductase subunit B OS=Leptothri... [more]
NDUS7_DICDI1.873e-5566.67NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
NUOB_RICTY2.446e-5565.54NADH-quinone oxidoreductase subunit B OS=Rickettsi... [more]
NUOB_RICB82.446e-5564.47NADH-quinone oxidoreductase subunit B OS=Rickettsi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-107-A04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691684 ID=EY691684; Name=EY691684; organism=Citrus sinensis; type=EST; length=961bp
ATCAATTTCTCTCTCGCTTTGCCCCCGTGTGAGAAAACTAAACCAAACCA
AACCAAACCCCACCCCACAACCCCCAAAACACAAGCCCAAAAAAAAAAAA
ACTATGGCGGTACTCACCAAAAACACTGCCACGCGCCTCCCTCTCCTCCT
CTCGCAACGCGCCGCCTGTCTCCACACGACCGTCCCCTCTCTCTCCTCGG
CCTCCGGCTCCTCCTCCTCCTCCTCGCAGCCCACCTCCTACGCTCGCCCT
CCACCGCCCTCGACCACAAGTCCAGGCGGTATCTCAAAGACGGCGGAATT
CGTGATCTCTAAATTGGATGATGTCGTCAACTATATTCGTCGCGGCTCCA
TCTGGCCCATGTCCTTCGGGCTGGCCTGCTGCGCCGTCGAGATGATGCAC
ACCGGTGCTGCTCGTTACGATTTAGATCGATTCGGTATCATTTTCAGGCC
CAGCCCTCGCCAATCCGATGTCATGGTCGTAGCTGGCACACTCACAAACA
AGATGGCCCCTGCCCTTCGCAAGGTTTATGATCAAATGCCAGATCCTAGG
TGGGTCATTTCTATGGGAAGCTGTGCAAATGGTGGTGGATATTATCATTA
CTCTTACTCTGTTGTTCGGGGTTGCGATAGGATTGTCCCCGTGGACATCT
ATGTTCCGGGCTGCCCTCCTACTGCTGAGGCCCTACTCTAAGGAATTCTC
CAACTGCAAAAAAAAATGAACAGGCGCAGAGATTTGTATTATTGGGGGAA
CAAAGGAAGAAAGCTCAGGGGGGTCCTTGGGAAGTAAACCTCAAATAATA
TGTTTTGAAGTGAAAAAAAAAAACAACTTTGGCCCGGGGGGGGGAACCTT
GTTTAAGGGGAATTTTTAAAAGGGAAAAAGATGTTTTTAAAAAGGGAAAA
AAAAAAATAATGGGATCCCCCAAACCTCGTTGGGGTAATTTCCCAAAAAG
GGGTTTTGTAA
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