EY690948

Overview
NameEY690948
Unique NameEY690948
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: FGFR1_PLEWA (Fibroblast growth factor receptor 1 OS=Pleurodeles waltlii GN=FGFR1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.385e-22
Identity = 70/197 (35.53%), Postives = 102/197 (51.78%), Query Frame = 1
Query:    1 PTRPQNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLKLRS*QLCVKASLSVLQ*HP 567
            P       +  K  V  A  VARGM Y+     IHRDL + N+L++ D  +KIADFG+AR        +  T G  P     +WMAPE +  R YT + DV+SFG++LWE+ T G  P+  +  V+  F ++ +G R   P +C   L  +M  CW   P  RP F ++V +  R++ + S Q  +  S+ V Q  P
Sbjct:  583 PIHVSKDMLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDSVMKIADFGLARDIHHIDYYKKTTNGRLP----VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGHRMDKPGNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAMTSNQEYLDLSMPVDQYSP 774          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: LIMK1_RAT (LIM domain kinase 1 OS=Rattus norvegicus GN=Limk1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.809e-22
Identity = 61/175 (34.86%), Postives = 91/175 (52.00%), Query Frame = 1
Query:    7 RPQNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE---------------TGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKG-VRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEI 483
            +  ++  P    V  A D+A GMAY+H +  IHRDL S N L+  ++++ +ADFG+AR+ +  +G + +                G   WMAPEMI  R Y +KVDV+SFGIVL E+I  +    +       F +  +G +    P +C P    I  RC D +PE RP F ++
Sbjct:  426 KSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENRNVVVADFGLARLMIDEKGQSEDLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKL 600          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: FGFR1_MOUSE (Basic fibroblast growth factor receptor 1 OS=Mus musculus GN=Fgfr1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.809e-22
Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = 1
Query:    1 PTRPQNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLKLRS*QLCVKASLSVLQ*HP 567
            P+      +  K  V  A  VARGM Y+     IHRDL + N+L++ D  +KIADFG+AR        +  T G  P     +WMAPE +  R YT + DV+SFG++LWE+ T G  P+  +  V+  F ++ +G R   P +C   L  +M  CW   P  RP F ++V +  R++ L S Q  +  S+ + Q  P
Sbjct:  587 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP----VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLDLSIPLDQYSP 778          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: FGFR1_HUMAN (Basic fibroblast growth factor receptor 1 OS=Homo sapiens GN=FGFR1 PE=1 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.809e-22
Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = 1
Query:    1 PTRPQNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLKLRS*QLCVKASLSVLQ*HP 567
            P+      +  K  V  A  VARGM Y+     IHRDL + N+L++ D  +KIADFG+AR        +  T G  P     +WMAPE +  R YT + DV+SFG++LWE+ T G  P+  +  V+  F ++ +G R   P +C   L  +M  CW   P  RP F ++V +  R++ L S Q  +  S+ + Q  P
Sbjct:  587 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP----VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLDLSMPLDQYSP 778          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: LIMK1_HUMAN (LIM domain kinase 1 OS=Homo sapiens GN=LIMK1 PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 2.363e-22
Identity = 66/175 (37.71%), Postives = 93/175 (53.14%), Query Frame = 1
Query:    7 RPQNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEV----QTEGM----TPE-------TGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKG-VRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEI 483
            +  ++  P    V  A D+A GMAY+H +  IHRDL S N L+  +K++ +ADFG+AR+ V    Q EG+     P+        G   WMAPEMI  R Y +KVDV+SFGIVL E+I  +    +       F +  +G +    P +C P    I  RC D +PE RP F ++
Sbjct:  426 KSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKL 600          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: FGFR3_CHICK (Fibroblast growth factor receptor 3 OS=Gallus gallus GN=FGFR3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.363e-22
Identity = 65/167 (38.92%), Postives = 92/167 (55.09%), Query Frame = 1
Query:   43 VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLKLRS 519
            V  A  VARGM Y+     IHRDL + N+L++ D  +KIADFG+AR        +  T G  P     +WMAPE +  R YT + DV+SFG++LWE+ T G  P+  +  V+  F ++ +G R   P +C   L  IM  CW   P  RP F ++V +  R+L + S
Sbjct:  589 VSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLP----VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHDLYMIMRECWHAVPSQRPTFKQLVEDLDRVLTMTS 750          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: FGFR3_XENLA (Fibroblast growth factor receptor 3 OS=Xenopus laevis GN=fgfr3 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.086e-22
Identity = 68/184 (36.96%), Postives = 98/184 (53.26%), Query Frame = 1
Query:   43 VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLKLRS*QLCVKASLSVLQ*HPP 570
            V  A  VARGM Y+     IHRDL + N+L++ D  +KIADFG+AR        +  T G  P     +WMAPE +  R YT   DV+S+G++LWE+ T G  P+  +  V+  F ++ +G R   P +C   L  IM  CW   P  RP F ++V +  R+L + S    +  S++  Q  PP
Sbjct:  585 VSCAYQVARGMEYLASQKCIHRDLAARNVLVTDDNVMKIADFGLARDIHNIDYYKKTTNGRLP----VKWMAPEALFDRIYTHHSDVWSYGVLLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPAFKQLVEDLDRVLTVTSTNEYLDLSVAFEQYSPP 763          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: FGFR3_PLEWA (Fibroblast growth factor receptor 3 OS=Pleurodeles waltlii GN=FGFR3 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.086e-22
Identity = 65/167 (38.92%), Postives = 92/167 (55.09%), Query Frame = 1
Query:   43 VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLKLRS 519
            V  A  VARGM Y+     IHRDL + N+L++ D  +KIADFG+AR        +  T G  P     +WMAPE +  R YT + DV+SFG++LWE+ T G  P+  +  V+  F ++ +G R   P +C   L  IM  CW   P  RP F ++V +  R+L + S
Sbjct:  580 VSCAYQVARGMEYLASQKCIHRDLAARNVLVTDDNVMKIADFGLARDVHNIDYYKKTTNGRLP----VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 741          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: FGFR4_RAT (Fibroblast growth factor receptor 4 OS=Rattus norvegicus GN=Fgfr4 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.030e-22
Identity = 65/172 (37.79%), Postives = 94/172 (54.65%), Query Frame = 1
Query:    1 PTRPQNTAVPLKLA--VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIV 486
            P  P+++  PL     V  A  VARGM Y+     IHRDL + N+L++ D  +KIADFG+AR        +  + G  P     +WMAPE +  R YT + DV+SFGI+LWE+ T G  P+  +  V+  F+++ +G R   P +C   L  +M  CW   P  RP F ++V
Sbjct:  572 PDGPRSSEGPLSFPALVSCAYQVARGMQYLESRKCIHRDLAARNVLVTEDDVMKIADFGLARGVHHIDYYKKTSNGRLP----VKWMAPEALFDRVYTHQSDVWSFGILLWEIFTLGGSPYPGI-PVEELFSLLREGHRMERPPNCPSELYGLMRECWHAAPSQRPTFKQLV 738          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: FGFR3_MOUSE (Fibroblast growth factor receptor 3 OS=Mus musculus GN=Fgfr3 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.030e-22
Identity = 65/168 (38.69%), Postives = 91/168 (54.17%), Query Frame = 1
Query:   43 VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT--GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLKLRS 519
            V  A  VARGM Y+     IHRDL + N+L++ D  +KIADFG+AR        +  T G  P     +WMAPE +  R YT + DV+SFG++LWE+ T  G  P+  +  V+  F ++ +G R   P  C   L  IM  CW   P  RP F ++V +  R+L + S
Sbjct:  589 VSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLP----VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTPGGPSPYPGI-PVEELFKLLKEGHRMDKPASCTHDLYMIMRECWHAVPSQRPTFKQLVEDLDRILTVTS 751          
The following BLAST results are available for this feature:
BLAST of EY690948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FGFR1_PLEWA1.385e-2235.53Fibroblast growth factor receptor 1 OS=Pleurodeles... [more]
LIMK1_RAT1.809e-2234.86LIM domain kinase 1 OS=Rattus norvegicus GN=Limk1 ... [more]
FGFR1_MOUSE1.809e-2235.53Basic fibroblast growth factor receptor 1 OS=Mus m... [more]
FGFR1_HUMAN1.809e-2235.53Basic fibroblast growth factor receptor 1 OS=Homo ... [more]
LIMK1_HUMAN2.363e-2237.71LIM domain kinase 1 OS=Homo sapiens GN=LIMK1 PE=1 ... [more]
FGFR3_CHICK2.363e-2238.92Fibroblast growth factor receptor 3 OS=Gallus gall... [more]
FGFR3_XENLA3.086e-2236.96Fibroblast growth factor receptor 3 OS=Xenopus lae... [more]
FGFR3_PLEWA3.086e-2238.92Fibroblast growth factor receptor 3 OS=Pleurodeles... [more]
FGFR4_RAT4.030e-2237.79Fibroblast growth factor receptor 4 OS=Rattus norv... [more]
FGFR3_MOUSE4.030e-2238.69Fibroblast growth factor receptor 3 OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-101-D11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690948 ID=EY690948; Name=EY690948; organism=Citrus sinensis; type=EST; length=874bp
CCCACGCGTCCGCAGAATACGGCTGTGCCGCTAAAATTGGCGGTTAAGCA
GGCACTGGATGTGGCAAGGGGGATGGCATATGTGCATGGTCTTGGGTTTA
TCCACAGGGATCTAAAGTCAGATAACCTTCTAATCTCTGCAGATAAATCT
ATCAAAATTGCTGATTTTGGTGTAGCAAGAATTGAAGTGCAGACGGAGGG
GATGACCCCAGAGACAGGGACGTATCGTTGGATGGCTCCAGAGATGATTC
AACATAGGCCTTACACACAAAAAGTGGATGTCTATAGCTTTGGGATTGTC
CTTTGGGAGCTAATAACAGGTTTGCTTCCGTTCCAAAACATGACAGCAGT
GCAGGCAGCATTTGCTGTGGTGAATAAAGGTGTAAGGCCAGTGATCCCAG
ATGACTGTCTCCCTGTGCTTAGCGAGATCATGACTCGCTGCTGGGACACC
AACCCGGAAGTTCGTCCACCCTTCACTGAGATCGTGAGGAATGCCTAGAG
AATGCTGAAACTGAGATCATGACAACTGTGCGTAAAGGCCTCGCTTTCGG
TGTTGCAATGACATCCACCAATGACAGGTGACTGGATTCCATATTAAAAG
GCCAAGGACAGATCACAAAGAAGGATATAAATGAATTGGACGCCCGTCGA
ACCAAAGCCGCACAAACATTTGCATAATGGGCCGGGGGATCGACACACAC
CTATCTTCTTAACAGACACAAACTCCCGATACCCCATCACTTACCTGTTG
ATCCGGCCGGCAAGTGTCCATCCTACTGGAAACCCCCGTACGGGGGAGAA
AGGCGCCACCACCCCACTCCCACACGGACACCCGCCGTGAGAGGAGCACG
GAAAGCGGGCGGCGAAGCCCCCGC
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