EY690948

Overview
NameEY690948
Unique NameEY690948
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: CSK_HUMAN (Tyrosine-protein kinase CSK OS=Homo sapiens GN=CSK PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.173e-21
Identity = 53/150 (35.33%), Postives = 87/150 (58.00%), Query Frame = 1
Query:   43 VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG--TYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEI 483
            +K +LDV   M Y+ G  F+HRDL + N+L+S D   K++DFG+ +        T +TG    +W APE ++ + ++ K DV+SFGI+LWE+ + G +P+  +  ++     V KG +   PD C P + E+M  CW  +  +RP F ++
Sbjct:  292 LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 436          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: ABL1_CAEEL (Tyrosine-protein kinase abl-1 OS=Caenorhabditis elegans GN=abl-1 PE=1 SV=4)

HSP 1 Score: 103.99 bits (258), Expect = 1.173e-21
Identity = 57/175 (32.57%), Postives = 95/175 (54.29%), Query Frame = 1
Query:    7 RPQNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLKLRS 519
            R   + +P  + V+ A  +A GM+Y+    FIHRDL + N L+S    +KIADFG+AR  ++ +  T   G     +W APE +    ++ K DV++FG++LWE+ T G+ P+  +  +   + ++  G R   P  C P +  +M +CW+ +P  RP F +I  N   ++   S
Sbjct:  398 RTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARF-MKEDTYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGV-ELSNVYGLLENGFRMDGPQGCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLENLISSNS 570          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: PGFRB_HUMAN (Beta-type platelet-derived growth factor receptor OS=Homo sapiens GN=PDGFRB PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 56/153 (36.60%), Postives = 86/153 (56.21%), Query Frame = 1
Query:   61 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY---RWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RML 507
            VA GM ++     +HRDL + N+LI   K +KI DFG+AR  ++      +  T+   +WMAPE I +  YT   DV+SFGI+LWE+ T G  P+  +   +  +  + +G R   P      + EIM +CW+   E+RPPF+++V    R+L
Sbjct:  810 VANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLL 962          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: PGFRB_CANFA (Beta-type platelet-derived growth factor receptor OS=Canis familiaris GN=PDGFRB PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 56/153 (36.60%), Postives = 86/153 (56.21%), Query Frame = 1
Query:   61 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY---RWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RML 507
            VA GM ++     +HRDL + N+LI   K +KI DFG+AR  ++      +  T+   +WMAPE I +  YT   DV+SFGI+LWE+ T G  P+  +   +  +  + +G R   P      + EIM +CW+   E+RPPF+++V    R+L
Sbjct:  810 VANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLL 962          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: PGFRA_HUMAN (Alpha-type platelet-derived growth factor receptor OS=Homo sapiens GN=PDGFRA PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 1
Query:   61 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY---RWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPF---TEIVRN 492
            VARGM ++     +HRDL + N+L++  K +KI DFG+AR  +       +  T+   +WMAPE I    YT   DV+S+GI+LWE+ + G  P+  M      +  +  G R   PD     + EIM +CW++ PE RP F   +EIV N
Sbjct:  802 VARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVEN 952          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: MET_ORNAN (Hepatocyte growth factor receptor OS=Ornithorhynchus anatinus GN=MET PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 56/150 (37.33%), Postives = 88/150 (58.67%), Query Frame = 1
Query:   55 LDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT-----YRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIV 486
            L VA+GM Y+    F+HRDL + N ++    ++K+ADFG+AR     E  +    T      +WMA E +Q + +T K DV+SFG++LWEL+T G  P+ ++        ++ +G R + P+ C   L E+M +CW  N E+RP F+E+V
Sbjct: 1187 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTSKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLFEVMLKCWHPNAEMRPSFSELV 1335          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: FAK2_HUMAN (Protein-tyrosine kinase 2-beta OS=Homo sapiens GN=PTK2B PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 60/167 (35.93%), Postives = 96/167 (57.49%), Query Frame = 1
Query:    7 RPQNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPF---QNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIV 486
            R +N+   L L V  +L + + MAY+  +  +HRD+   N+L+++ + +K+ DFG++R  ++ E     + T    +WM+PE I  R +T   DV+ F + +WE+++ G  PF   +N   +     V+ KG R   PD C PVL  +MTRCWD +P  RP FTE+V
Sbjct:  516 RNKNSLKVLTL-VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI----GVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 676          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: CSK_BOVIN (Tyrosine-protein kinase CSK OS=Bos taurus GN=CSK PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 53/150 (35.33%), Postives = 86/150 (57.33%), Query Frame = 1
Query:   43 VKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG--TYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEI 483
            +K +LDV   M Y+ G  F+HRDL + N+L+S D   K++DFG+ +        T +TG    +W APE ++ + ++ K DV+SFGI+LWE+ + G +P+  +  ++     V KG +   PD C P + E+M  CW  +   RP F ++
Sbjct:  292 LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAATRPSFLQL 436          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: ROC11_DICDI (Probable serine/threonine-protein kinase roco11 OS=Dictyostelium discoideum GN=roco11 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.000e-21
Identity = 56/160 (35.00%), Postives = 96/160 (60.00%), Query Frame = 1
Query:   43 VKQALDVARGMAYVHGLG--FIHRDLKSDNL-LISADKSI----KIADFGVARIEVQTEGMTPETGTYRWMAPEMI-QHRPYTQKVDVYSFGIVLWELITGLLPFQNMTA---VQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVR 489
            V+  LD+A+G+ Y+       +HRDL+S N+ L S D++     K+ADFG+++  + +  ++   G ++WMAPE I     YT+K+D YSF ++L+ ++TG  PF   T+   ++    +  + +RP IP DC P +S ++  CW  +P+ RP F+ IV+
Sbjct: 1289 VRLMLDIAKGIEYLQNQNPPIVHRDLRSPNIFLFSLDENAPVCAKVADFGLSQQSLYS--VSGLLGNFQWMAPETIGAEESYTEKIDTYSFSMILFTILTGECPFDEFTSFGKMEFIRKIREEDLRPTIPSDCPPTISNLIELCWSGDPKKRPHFSYIVK 1446          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: PGFRA_MOUSE (Alpha-type platelet-derived growth factor receptor OS=Mus musculus GN=Pdgfra PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 2.000e-21
Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 1
Query:   61 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY---RWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPF---TEIVRN 492
            VARGM ++     +HRDL + N+L++  K +KI DFG+AR  +       +  T+   +WMAPE I    YT   DV+S+GI+LWE+ + G  P+  M      +  +  G R   PD     + EIM +CW++ PE RP F   +EIV N
Sbjct:  802 VARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVQCWNSEPEKRPSFYHLSEIVEN 952          
The following BLAST results are available for this feature:
BLAST of EY690948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK_HUMAN1.173e-2135.33Tyrosine-protein kinase CSK OS=Homo sapiens GN=CSK... [more]
ABL1_CAEEL1.173e-2132.57Tyrosine-protein kinase abl-1 OS=Caenorhabditis el... [more]
PGFRB_HUMAN1.532e-2136.60Beta-type platelet-derived growth factor receptor ... [more]
PGFRB_CANFA1.532e-2136.60Beta-type platelet-derived growth factor receptor ... [more]
PGFRA_HUMAN1.532e-2137.75Alpha-type platelet-derived growth factor receptor... [more]
MET_ORNAN1.532e-2137.33Hepatocyte growth factor receptor OS=Ornithorhynch... [more]
FAK2_HUMAN1.532e-2135.93Protein-tyrosine kinase 2-beta OS=Homo sapiens GN=... [more]
CSK_BOVIN1.532e-2135.33Tyrosine-protein kinase CSK OS=Bos taurus GN=CSK P... [more]
ROC11_DICDI2.000e-2135.00Probable serine/threonine-protein kinase roco11 OS... [more]
PGFRA_MOUSE2.000e-2137.75Alpha-type platelet-derived growth factor receptor... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-101-D11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690948 ID=EY690948; Name=EY690948; organism=Citrus sinensis; type=EST; length=874bp
CCCACGCGTCCGCAGAATACGGCTGTGCCGCTAAAATTGGCGGTTAAGCA
GGCACTGGATGTGGCAAGGGGGATGGCATATGTGCATGGTCTTGGGTTTA
TCCACAGGGATCTAAAGTCAGATAACCTTCTAATCTCTGCAGATAAATCT
ATCAAAATTGCTGATTTTGGTGTAGCAAGAATTGAAGTGCAGACGGAGGG
GATGACCCCAGAGACAGGGACGTATCGTTGGATGGCTCCAGAGATGATTC
AACATAGGCCTTACACACAAAAAGTGGATGTCTATAGCTTTGGGATTGTC
CTTTGGGAGCTAATAACAGGTTTGCTTCCGTTCCAAAACATGACAGCAGT
GCAGGCAGCATTTGCTGTGGTGAATAAAGGTGTAAGGCCAGTGATCCCAG
ATGACTGTCTCCCTGTGCTTAGCGAGATCATGACTCGCTGCTGGGACACC
AACCCGGAAGTTCGTCCACCCTTCACTGAGATCGTGAGGAATGCCTAGAG
AATGCTGAAACTGAGATCATGACAACTGTGCGTAAAGGCCTCGCTTTCGG
TGTTGCAATGACATCCACCAATGACAGGTGACTGGATTCCATATTAAAAG
GCCAAGGACAGATCACAAAGAAGGATATAAATGAATTGGACGCCCGTCGA
ACCAAAGCCGCACAAACATTTGCATAATGGGCCGGGGGATCGACACACAC
CTATCTTCTTAACAGACACAAACTCCCGATACCCCATCACTTACCTGTTG
ATCCGGCCGGCAAGTGTCCATCCTACTGGAAACCCCCGTACGGGGGAGAA
AGGCGCCACCACCCCACTCCCACACGGACACCCGCCGTGAGAGGAGCACG
GAAAGCGGGCGGCGAAGCCCCCGC
back to top