EY690948

Overview
NameEY690948
Unique NameEY690948
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: GBPC_DICDI (Cyclic GMP-binding protein C OS=Dictyostelium discoideum GN=gbpC PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.703e-18
Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 1
Query:   37 LAVKQALDVARGMAYVHGLG--FIHRDLKSDNLLISA-----DKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAV---VNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIV 486
            L ++ A ++A+GM ++H      IHRDLKS N+L++      +    I DFG +        +        W+ PE++    Y++  DVYSFGI+LWEL T   PF      Q    +   + +G+RP IP  C P   E++  CW   P  RP FT IV
Sbjct:  997 LRLQIASEIAKGMQHLHSHNPPVIHRDLKSPNILLNGITEGQNSVATIIDFGTSTALYGGAALIRCVDQPLWLGPEVLAGTAYSEPSDVYSFGIILWELYTRAHPFDEFQFGQWMSKLEDEIIRGLRPTIPPTCPPEYVELIQSCWTHEPNSRPTFTSIV 1156          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: FES_FSVST (Tyrosine-protein kinase transforming protein Fes OS=Feline sarcoma virus (strain Snyder-Theilen) GN=V-FES PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.703e-18
Identity = 55/163 (33.74%), Postives = 86/163 (52.76%), Query Frame = 1
Query:    7 RPQNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR-----WMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFT 477
            R +   + +K  ++   D A GM Y+     IHRDL + N L++    +KI+DFG++R E   +G+   +G  R     W APE + +  Y+ + DV+SFGI+LWE  + G  P+ N++  Q     V KG R   P+ C   +  +M +CW   P  RP F+
Sbjct:  304 RTEGARLRMKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREE--ADGVYAASGGLRLVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR-EFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFS 463          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: EPHB3_DANRE (Ephrin type-B receptor 3 (Fragment) OS=Danio rerio GN=ephb3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.703e-18
Identity = 52/157 (33.12%), Postives = 85/157 (54.14%), Query Frame = 1
Query:   61 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT------YRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLK 510
            +A GM Y+  + ++HRDL + N+L++++   K++DFG++R           T +       RW APE I  R +T   DV+S+GIV+WE+++ G  P+ +M+  Q     V +  R   P DC  VL ++M  CW     +RP F +IV    + L+
Sbjct:  296 IAAGMKYLSDMNYVHRDLAARNVLVNSNLVCKVSDFGLSRFLDDNSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVMSFGERPYWDMSN-QDVMNAVEQDYRLPPPMDCPAVLHQLMLECWVKERNMRPRFGQIVSTLDKFLR 451          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: YP150_YEAST (Putative serine/threonine-protein kinase YPL150W OS=Saccharomyces cerevisiae GN=YPL150W PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.531e-18
Identity = 48/148 (32.43%), Postives = 86/148 (58.11%), Query Frame = 1
Query:   61 VARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQ-KVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVR---PVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRN 492
            ++  + Y H +  +HRDLK +N+L+  + + K+ DFG  R  +    +    GT  +MAPE+I+ R Y   K+D++S G++L+ LITG LPF +    +  + +VN+  +    VIPDD   ++S ++ +    NP  RP  ++++R+
Sbjct:  141 ISGAVYYAHSMHCVHRDLKLENILLDKNGNAKLTDFGFTRECMTKTTLETVCGTTVYMAPELIERRTYDGFKIDIWSLGVILYTLITGYLPFDDDDEAKTKWKIVNEEPKYDAKVIPDDARDLISRLLAK----NPGERPSLSQVLRH 284          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: ROCO6_DICDI (Probable serine/threonine-protein kinase roco6 OS=Dictyostelium discoideum GN=roco6 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.531e-18
Identity = 56/167 (33.53%), Postives = 94/167 (56.29%), Query Frame = 1
Query:   37 LAVKQALDVARGMAYVHGLG--FIHRDLKSDNLLISADKSI---KIADFGVA-RIEVQT---EGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQ--NMTAVQAAFAVVNKGVRPVIPDDCLPVLS-----EIMTRCWDTNPEVRPPFTEIVR 489
            L +K ALD+A+GM ++H +    +HRDLKS N+L+S    +   K+ DFG++ R+ +Q    +      G   W+APE+++   YT K DVY+FG++L EL+T   P++  N + V      +  G+RP I       ++      ++  CWD++ + RP F +IV+
Sbjct: 1455 LILKLALDIAKGMEFLHSVTPPLLHRDLKSPNVLLSMKDGVYTAKVGDFGLSSRMFIQALKHKLRNFPVGNITWVAPEILREEEYTVKSDVYAFGLILHELLTRKHPYREFNYSMVSLQEDAIKNGLRPTISPSYTQTVTGHEYCGLIQDCWDSDIDRRPTFNKIVK 1621          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: RAF_MSV36 (Serine/threonine-protein kinase-transforming protein raf OS=Murine sarcoma virus 3611 GN=V-RAF PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.531e-18
Identity = 56/167 (33.53%), Postives = 91/167 (54.49%), Query Frame = 1
Query:   34 KLAVKQALDVAR----GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETGTYRWMAPEMIQ---HRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPD------DCLPVLSEIMTRCWDTNPEVRPPFTEIV 486
            K  + Q +D+AR    GM Y+H    IHRD+KS+N+ +    ++KI DFG+A ++ +  G   +   TG+  WMAPE+I+     P++ + DVYS+GIVL+EL+ G LP+ ++        +V +G     PD      +C   +  ++  C     E RP F +I+
Sbjct:  114 KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDDNPFSFQSDVYSYGIVLYELMAGELPYAHINNRDQIIFMVGRGY--ASPDLSRLYKNCPKAIKRLVADCVKKVKEERPLFPQIL 278          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: RAF1_MOUSE (RAF proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Raf1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.531e-18
Identity = 56/167 (33.53%), Postives = 91/167 (54.49%), Query Frame = 1
Query:   34 KLAVKQALDVAR----GMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEG---MTPETGTYRWMAPEMIQ---HRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPD------DCLPVLSEIMTRCWDTNPEVRPPFTEIV 486
            K  + Q +D+AR    GM Y+H    IHRD+KS+N+ +    ++KI DFG+A ++ +  G   +   TG+  WMAPE+I+     P++ + DVYS+GIVL+EL+ G LP+ ++        +V +G     PD      +C   +  ++  C     E RP F +I+
Sbjct:  439 KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDDNPFSFQSDVYSYGIVLYELMAGELPYAHINNRDQIIFMVGRGY--ASPDLSRLYKNCPKAMKRLVADCVKKVKEERPLFPQIL 603          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: MUSK_RAT (Muscle, skeletal receptor tyrosine protein kinase OS=Rattus norvegicus GN=Musk PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.531e-18
Identity = 57/155 (36.77%), Postives = 80/155 (51.61%), Query Frame = 1
Query:   52 ALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETG---TYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RM 504
            A  VA GMAY+    F+HRDL + N L+  +  +KIADFG++R     +    +       RWM PE I +  YT + DV+++G+VLWE+ + GL P+  M A +     V  G     P++C   L  +M  CW   P  RP F  I R   RM
Sbjct:  705 ARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM-AHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 858          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: MERTK_MOUSE (Proto-oncogene tyrosine-protein kinase Mer OS=Mus musculus GN=Mertk PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.531e-18
Identity = 50/156 (32.05%), Postives = 87/156 (55.77%), Query Frame = 1
Query:   25 VPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI----EVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFT 477
            + L+  +K  +D+A+GM Y+    F+HRDL + N ++  D ++ +ADFG+++     +   +G   +    +W+A E +  R YT K DV++FG+ +WE+ T G+ P+  +      +  +  G R   P+DCL  L +IM  CW  +P  RP F+
Sbjct:  690 IHLQTLLKFMMDIAQGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM-PVKWIAIESLADRVYTSKSDVWAFGVTMWEITTRGMTPYPGVQN-HEMYDYLLHGHRLKQPEDCLDELYDIMYSCWSADPLDRPTFS 843          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: ERBB2_MESAU (Receptor tyrosine-protein kinase erbB-2 OS=Mesocricetus auratus GN=ERBB2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.531e-18
Identity = 52/156 (33.33%), Postives = 88/156 (56.41%), Query Frame = 1
Query:   55 LDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-IEVQTEGMTPETG--TYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLK 510
            + +A+GM+Y+  +  +HRDL + N+L+ +   +KI DFG+AR +++       + G    +W+A E I  R +T + DV+S+G+ +WEL+T G  P+  + A +    ++ KG R   P  C   +  IM +CW  + E RP F E+V    RM +
Sbjct:  827 VQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWIALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIP-DLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMAR 981          
The following BLAST results are available for this feature:
BLAST of EY690948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GBPC_DICDI2.703e-1834.38Cyclic GMP-binding protein C OS=Dictyostelium disc... [more]
FES_FSVST2.703e-1833.74Tyrosine-protein kinase transforming protein Fes O... [more]
EPHB3_DANRE2.703e-1833.12Ephrin type-B receptor 3 (Fragment) OS=Danio rerio... [more]
YP150_YEAST3.531e-1832.43Putative serine/threonine-protein kinase YPL150W O... [more]
ROCO6_DICDI3.531e-1833.53Probable serine/threonine-protein kinase roco6 OS=... [more]
RAF_MSV363.531e-1833.53Serine/threonine-protein kinase-transforming prote... [more]
RAF1_MOUSE3.531e-1833.53RAF proto-oncogene serine/threonine-protein kinase... [more]
MUSK_RAT3.531e-1836.77Muscle, skeletal receptor tyrosine protein kinase ... [more]
MERTK_MOUSE3.531e-1832.05Proto-oncogene tyrosine-protein kinase Mer OS=Mus ... [more]
ERBB2_MESAU3.531e-1833.33Receptor tyrosine-protein kinase erbB-2 OS=Mesocri... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-101-D11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690948 ID=EY690948; Name=EY690948; organism=Citrus sinensis; type=EST; length=874bp
CCCACGCGTCCGCAGAATACGGCTGTGCCGCTAAAATTGGCGGTTAAGCA
GGCACTGGATGTGGCAAGGGGGATGGCATATGTGCATGGTCTTGGGTTTA
TCCACAGGGATCTAAAGTCAGATAACCTTCTAATCTCTGCAGATAAATCT
ATCAAAATTGCTGATTTTGGTGTAGCAAGAATTGAAGTGCAGACGGAGGG
GATGACCCCAGAGACAGGGACGTATCGTTGGATGGCTCCAGAGATGATTC
AACATAGGCCTTACACACAAAAAGTGGATGTCTATAGCTTTGGGATTGTC
CTTTGGGAGCTAATAACAGGTTTGCTTCCGTTCCAAAACATGACAGCAGT
GCAGGCAGCATTTGCTGTGGTGAATAAAGGTGTAAGGCCAGTGATCCCAG
ATGACTGTCTCCCTGTGCTTAGCGAGATCATGACTCGCTGCTGGGACACC
AACCCGGAAGTTCGTCCACCCTTCACTGAGATCGTGAGGAATGCCTAGAG
AATGCTGAAACTGAGATCATGACAACTGTGCGTAAAGGCCTCGCTTTCGG
TGTTGCAATGACATCCACCAATGACAGGTGACTGGATTCCATATTAAAAG
GCCAAGGACAGATCACAAAGAAGGATATAAATGAATTGGACGCCCGTCGA
ACCAAAGCCGCACAAACATTTGCATAATGGGCCGGGGGATCGACACACAC
CTATCTTCTTAACAGACACAAACTCCCGATACCCCATCACTTACCTGTTG
ATCCGGCCGGCAAGTGTCCATCCTACTGGAAACCCCCGTACGGGGGAGAA
AGGCGCCACCACCCCACTCCCACACGGACACCCGCCGTGAGAGGAGCACG
GAAAGCGGGCGGCGAAGCCCCCGC
back to top