EY690948

Overview
NameEY690948
Unique NameEY690948
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: DDR1_RAT (Epithelial discoidin domain-containing receptor 1 OS=Rattus norvegicus GN=Ddr1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.531e-18
Identity = 59/174 (33.91%), Postives = 84/174 (48.28%), Query Frame = 1
Query:   13 QNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWE--LITGLLPFQNMTAVQAA------FAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVR 489
            Q   +   + +     +A GM Y+  L F+HRDL + N L+  + +IKIADFG++R         VQ   + P     RWMA E I    +T   DV++FG+ LWE  ++    PF  +T  Q        F    + V    P  C   L E+M RCW   PE RPPF+++ R
Sbjct:  731 QGPTISYPMLLHVGAQIASGMRYLATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLP----IRWMAWECILMGKFTTASDVWAFGVTLWEVLMLCRSQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQTLYELMLRCWSREPEQRPPFSQLHR 900          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: TYRO3_XENLA (Tyrosine-protein kinase receptor TYRO3 OS=Xenopus laevis GN=tyro3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.611e-18
Identity = 50/158 (31.65%), Postives = 88/158 (55.70%), Query Frame = 1
Query:   25 VPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI----EVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEI 483
            +P++  V+  +D+  GM Y+    FIHRDL + N +++ D ++ +ADFG+++     +   +G   +    +W+A E +    YT   DV++FG+ LWE+ T G  P+  +   +  ++ +  G R   P DCL  L E+M +CW T P+ RP F ++
Sbjct:  612 LPVQTLVRFMIDICSGMEYLSSKNFIHRDLATRNCMLNEDMTVCVADFGLSKKIYSGDYYRQGCASKL-PVKWLALESLADNVYTVHSDVWAFGVTLWEIATLGQTPYAGVENSE-IYSYLIAGNRLKQPLDCLDELYEMMCQCWITEPKRRPSFVDL 767          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: TYRO3_CHICK (Tyrosine-protein kinase receptor TYRO3 OS=Gallus gallus GN=TYRO3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.611e-18
Identity = 50/169 (29.59%), Postives = 94/169 (55.62%), Query Frame = 1
Query:   25 VPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI----EVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLKLR 516
            +PL+  +K  +D+A GM Y+    FIHRDL + N ++  + ++ +ADFG+++     +   +G   +    +W+A E +    YT   DV++FG+ +WE++T G  P+  +   +  +  +  G R   P +CL  + ++M RCW   P++RP F  ++R+   M++ R
Sbjct:  614 LPLQTLLKFMIDIASGMEYLSSKNFIHRDLAARNCMLDENMNVSVADFGLSKKIYSGDYYRQGCASKL-PVKWLALESLADNLYTTHSDVWAFGVTMWEIVTRGQTPYAGIENAE-IYNYLISGNRLKQPPECLEDVYDLMCRCWHPEPKLRPSF-GVLRSQLEMIRGR 779          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: STE20_NEUCR (Serine/threonine-protein kinase ste-20 OS=Neurospora crassa GN=ste-20 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.611e-18
Identity = 49/147 (33.33%), Postives = 82/147 (55.78%), Query Frame = 1
Query:   58 DVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFG-VARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPDDCL-PVLSEIMTRCWDTNPEVRPPFTEIVRN 492
            +  RG+ ++H  G IHRD+KSDN+L+S + +IK+ DFG  A I       T   GT  WMAPE++  + Y +KVD++S GI+  E+I G  P+   + ++A + +   G   +  +  L PV  + +      +PE R    +++R+
Sbjct:  776 ETLRGLQHLHSKGVIHRDIKSDNILLSMEGNIKLTDFGFCATINEAQSKRTTMVGTPYWMAPEVVTRKEYGRKVDIWSLGIMAIEMIEGEPPYLTESPLRALWLIATNGTPHIKDEQSLSPVFRDFLYFALKVDPEKRASAHDLLRH 922          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: PYK4_DICDI (Dual specificity protein kinase pyk4 OS=Dictyostelium discoideum GN=pyk4 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.611e-18
Identity = 58/174 (33.33%), Postives = 89/174 (51.15%), Query Frame = 1
Query:   37 LAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKS---------------------IKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNK--GVRPVIPDDCLPVLSEIMTRCWDTNPEVRP-PFTEIV 486
            L VK  LD+A+GM Y H  G IHRDL S+N+L++  K                       K+ DFG++    Q+E      G+  +MAPE +   P  +K D+YSFG+++W++ +   P    +  + A  V ++    RP IP +      E++T+CWD NP  RP  F+EI+
Sbjct:  403 LRVKILLDIAKGMLYSHRQGIIHRDLTSNNVLLNFRKKKLLNNNSSNNDEQFYDSDEIIAKVCDFGLS--SNQSESKKLRGGSIHYMAPENLNGSPINEKSDIYSFGLLVWQMFSYASPNTIYSPKEMASMVSDEKLNYRPQIPFNVPLKFKELITQCWDRNPLNRPKDFSEII 574          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: FES_MOUSE (Proto-oncogene tyrosine-protein kinase Fes/Fps OS=Mus musculus GN=Fes PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.611e-18
Identity = 56/165 (33.94%), Postives = 86/165 (52.12%), Query Frame = 1
Query:    7 RPQNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR-----WMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEI 483
            R +   + +K  ++   D A GM Y+     IHRDL + N L++    +KI+DFG++R E   +G+   +   R     W APE + +  Y+ + DV+SFGI+LWE  + G  P+ N+T  Q     V KG R   P+ C   +  +M +CW   P  RP F+ I
Sbjct:  649 RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREE--ADGIYAASAGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLTNQQTR-EFVEKGHRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSII 810          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: FES_FSVGA (Tyrosine-protein kinase transforming protein Fes OS=Feline sarcoma virus (strain Gardner-Arnstein) GN=V-FES PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.611e-18
Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 1
Query:    7 RPQNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYR-----WMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEI 483
            R +   + +K  ++   D A GM Y+     IHRDL + N L++    +KI+DFG++R     +G+   +G  R     W APE + +  Y+ + DV+SFGI+LWE  + G  P+ N++  Q     V KG R   P+ C   +  +M +CW   P  RP F+ I
Sbjct:  436 RTEGARLRMKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR--EAADGIYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR-EFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSAI 597          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: ERBB3_PONAB (Receptor tyrosine-protein kinase erbB-3 OS=Pongo abelii GN=ERBB3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.611e-18
Identity = 53/176 (30.11%), Postives = 91/176 (51.70%), Query Frame = 1
Query:    7 RPQNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-------EVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLK 510
            R    A+  +L +   + +A+GM Y+   G +HR+L + N+L+ +   +++ADFGVA +        + +E  TP     +WMA E I    YT + DV+S+G+ +WEL+T G  P+  +   +    ++ KG R   P  C   +  +M +CW  +  +RP F E+     RM +
Sbjct:  800 RQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP----IKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP-DLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 970          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: ERBB3_HUMAN (Receptor tyrosine-protein kinase erbB-3 OS=Homo sapiens GN=ERBB3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.611e-18
Identity = 53/176 (30.11%), Postives = 91/176 (51.70%), Query Frame = 1
Query:    7 RPQNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARI-------EVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVQAAFAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVRNA*RMLK 510
            R    A+  +L +   + +A+GM Y+   G +HR+L + N+L+ +   +++ADFGVA +        + +E  TP     +WMA E I    YT + DV+S+G+ +WEL+T G  P+  +   +    ++ KG R   P  C   +  +M +CW  +  +RP F E+     RM +
Sbjct:  800 RQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP----IKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP-DLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 970          
BLAST of EY690948 vs. ExPASy Swiss-Prot
Match: DDR1_MOUSE (Epithelial discoidin domain-containing receptor 1 OS=Mus musculus GN=Ddr1 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.611e-18
Identity = 59/174 (33.91%), Postives = 83/174 (47.70%), Query Frame = 1
Query:   13 QNTAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWE--LITGLLPFQNMTAVQAA------FAVVNKGVRPVIPDDCLPVLSEIMTRCWDTNPEVRPPFTEIVR 489
            Q   +   + +     +A GM Y+  L F+HRDL + N L+  + +IKIADFG++R         VQ   + P     RWMA E I    +T   DV++FG+ LWE  ++    PF  +T  Q        F    + V    P  C   L E+M RCW   PE RPPF ++ R
Sbjct:  732 QGPTISYPMLLHVGAQIASGMRYLATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLP----IRWMAWECILMGKFTTASDVWAFGVTLWEVLMLCRSQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQTLYELMLRCWSREPEQRPPFAQLHR 901          
The following BLAST results are available for this feature:
BLAST of EY690948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DDR1_RAT3.531e-1833.91Epithelial discoidin domain-containing receptor 1 ... [more]
TYRO3_XENLA4.611e-1831.65Tyrosine-protein kinase receptor TYRO3 OS=Xenopus ... [more]
TYRO3_CHICK4.611e-1829.59Tyrosine-protein kinase receptor TYRO3 OS=Gallus g... [more]
STE20_NEUCR4.611e-1833.33Serine/threonine-protein kinase ste-20 OS=Neurospo... [more]
PYK4_DICDI4.611e-1833.33Dual specificity protein kinase pyk4 OS=Dictyostel... [more]
FES_MOUSE4.611e-1833.94Proto-oncogene tyrosine-protein kinase Fes/Fps OS=... [more]
FES_FSVGA4.611e-1833.33Tyrosine-protein kinase transforming protein Fes O... [more]
ERBB3_PONAB4.611e-1830.11Receptor tyrosine-protein kinase erbB-3 OS=Pongo a... [more]
ERBB3_HUMAN4.611e-1830.11Receptor tyrosine-protein kinase erbB-3 OS=Homo sa... [more]
DDR1_MOUSE4.611e-1833.91Epithelial discoidin domain-containing receptor 1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-101-D11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690948 ID=EY690948; Name=EY690948; organism=Citrus sinensis; type=EST; length=874bp
CCCACGCGTCCGCAGAATACGGCTGTGCCGCTAAAATTGGCGGTTAAGCA
GGCACTGGATGTGGCAAGGGGGATGGCATATGTGCATGGTCTTGGGTTTA
TCCACAGGGATCTAAAGTCAGATAACCTTCTAATCTCTGCAGATAAATCT
ATCAAAATTGCTGATTTTGGTGTAGCAAGAATTGAAGTGCAGACGGAGGG
GATGACCCCAGAGACAGGGACGTATCGTTGGATGGCTCCAGAGATGATTC
AACATAGGCCTTACACACAAAAAGTGGATGTCTATAGCTTTGGGATTGTC
CTTTGGGAGCTAATAACAGGTTTGCTTCCGTTCCAAAACATGACAGCAGT
GCAGGCAGCATTTGCTGTGGTGAATAAAGGTGTAAGGCCAGTGATCCCAG
ATGACTGTCTCCCTGTGCTTAGCGAGATCATGACTCGCTGCTGGGACACC
AACCCGGAAGTTCGTCCACCCTTCACTGAGATCGTGAGGAATGCCTAGAG
AATGCTGAAACTGAGATCATGACAACTGTGCGTAAAGGCCTCGCTTTCGG
TGTTGCAATGACATCCACCAATGACAGGTGACTGGATTCCATATTAAAAG
GCCAAGGACAGATCACAAAGAAGGATATAAATGAATTGGACGCCCGTCGA
ACCAAAGCCGCACAAACATTTGCATAATGGGCCGGGGGATCGACACACAC
CTATCTTCTTAACAGACACAAACTCCCGATACCCCATCACTTACCTGTTG
ATCCGGCCGGCAAGTGTCCATCCTACTGGAAACCCCCGTACGGGGGAGAA
AGGCGCCACCACCCCACTCCCACACGGACACCCGCCGTGAGAGGAGCACG
GAAAGCGGGCGGCGAAGCCCCCGC
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