EY690947

Overview
NameEY690947
Unique NameEY690947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAAM (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=odhB PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S EAGV+ E +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAAC (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain COL) GN=odhB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S EAGV+ E +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAA8 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain NCTC 8325) GN=odhB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S EAGV+ E +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAA3 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain USA300) GN=odhB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 42/76 (55.26%), Postives = 55/76 (72.37%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S EAGV+ E +A EG+TVE G  IA+I   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVEVGQAIAII---GEG 78          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_BARVB (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Bartonella vinsonii subsp. berkhofii GN=sucB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.851e-14
Identity = 35/78 (44.87%), Postives = 53/78 (67.95%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEGVA 602
            VP +GES+T+ T+ K+ K  G+ V +DEP+ ++ETDKVT++V SP AG + E++AKEG+TVE    +  +      VA
Sbjct:    7 VPTLGESVTEATVGKWFKKLGEAVAIDEPLVELETDKVTVEVPSPVAGKLFEIIAKEGDTVEVNALLGAVEAGAASVA 84          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_STAHJ (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus haemolyticus (strain JCSC1435) GN=odhB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.526e-13
Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 596
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S E GV++E +A EG+TVE G  IA +   GEG
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEEGVLQEQLASEGDTVEVGQVIATV---GEG 78          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_DICDI (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Dictyostelium discoideum GN=odhB PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.993e-13
Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 3
Query:  333 FSSEGGDLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISK 584
            F S   D+V   VP MG+SI++GT+  + K  GD V +DE +  IETDKVTID+ +P +G I EL AKEGE V  G  +  I+K
Sbjct:   67 FYSSANDVV-IKVPSMGDSISEGTIVAWTKNVGDSVRVDEVVCSIETDKVTIDINAPVSGTIVELFAKEGENVTVGNDLYKIAK 149          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_BARQU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Bartonella quintana GN=sucB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.441e-13
Identity = 32/78 (41.03%), Postives = 52/78 (66.67%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEGVA 602
            VP +GES+T+ T+ K+ K  G+ V +DEP+ ++ETDKVT++V SP  G + E++AKEG+ VE    +  +     G++
Sbjct:    7 VPTLGESVTEATIGKWFKKLGEAVAVDEPLVELETDKVTVEVPSPVMGKLTEIIAKEGDIVEVNAVLGFVESGAAGIS 84          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_SCHPO (Probable dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC776.15c PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.800e-13
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 3
Query:  372 PFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 587
            P   ESIT+GTLA++LK PG+ V  DE IA +ETDK+   V +P+AGV+KE + KEG+T+     IAVI  S
Sbjct:   48 PPFPESITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAGVLKEQLVKEGDTITIDQDIAVIDTS 119          
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODB2_BACSU (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex OS=Bacillus subtilis GN=bfmBB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 35/78 (44.87%), Postives = 51/78 (65.38%), Query Frame = 3
Query:  369 VPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEGVA 602
            +P +GES+T+GT++K+L  PGD+V   +PIA++ TDKV  +V S   G I ELV +EG+T++ G  I  I   G   A
Sbjct:    8 MPQLGESVTEGTISKWLVAPGDKVNKYDPIAEVMTDKVNAEVPSSFTGTITELVGEEGQTLQVGEMICKIETEGANPA 85          
The following BLAST results are available for this feature:
BLAST of EY690947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ODO2_STAAM1.380e-1455.26Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAC1.380e-1455.26Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAA81.380e-1455.26Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAA31.380e-1455.26Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_BARVB6.851e-1444.87Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAHJ1.526e-1352.63Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_DICDI1.993e-1348.81Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_BARQU4.441e-1341.03Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_SCHPO5.800e-1352.78Probable dihydrolipoyllysine-residue succinyltrans... [more]
ODB2_BACSU3.759e-1244.87Lipoamide acyltransferase component of branched-ch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-101-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690947 ID=EY690947; Name=EY690947; organism=Citrus sinensis; type=EST; length=873bp
AGACTCTCTCAAGAAAACGCAACTTGTTCTGTTCGATCAAGCAGGTACAT
ACCTGAACAACGATGCTGGGTGTTATACGGAGAAGGGTCGCGAGTGGAGG
CTCGCCTGCTTCGATTTTAGGGCATTCACTGCAGACAATGAGGCCTGCAA
TGTCTGTATCTAGAGTCTCATCTATTGCAGGAAAAGAGACGTTACTGCAT
TCAAGAGGATTAGGGCATATCCGGAATTTCAGTCATTTAATTTTTCCAGG
TTGCTCTAAGGGTTGTCAACCATTAAGGGATGTAATTTCTAGCACCCAGA
AAGCAACTAACATGTATCTGTGGAGCCATCCATTTTCTTCTGAAGGAGGG
GATTTGGTTGATGCTGTTGTCCCTTTTATGGGTGAATCCATAACCGATGG
TACTTTGGCAAAATTCTTGAAGGGTCCTGGTGATAGGGTGGAACTTGATG
AACCAATTGCTCAAATTGAAACCGATAAGGTAACGATTGATGTTGCAAGT
CCGGAAGCAGGTGTTATCAAAGAGCTTGTAGCCAAAGAAGGGGAGACTGT
GGAACCAGGTACCAAGATTGCTGTGATTTCAAAGTCTGGGGAAGGTGTAG
CTCATGTACCTCCCTCAAAAAAAATACCAGAAAAAGCTGCTCCTAAACCC
CCTTCTGCTGAAAAAGCAAAGGAGGAAAAGCCGCACCCTAAAGTTGAAAC
TTGTTCTGAGAAACAAAAACACCCTCTCACCCCCCTCTAACCGCCCTGGT
TACTGAACCCTCCCTTCCCCCCAAGGGAAAGGGAAAAAAAATTTCTTATG
ACACAACTTACCAAACCGACTTGCAACCCGAATTGAAAAATCCCCCAAAA
AAAATTTGGGAATGGTGGACTCC
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