EY690947

Overview
NameEY690947
Unique NameEY690947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_BACSU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Bacillus subtilis GN=odhB PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.094e-11
Identity = 35/84 (41.67%), Postives = 59/84 (70.24%), Query Frame = 3 
Query:  354 LVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISK-SGEGVA 602
            + +  VP + ESI++GT+A++LK PGD VE  E + ++ETDKV +++ + E+GV++E++   G+TV+ G  I  IS+ +GE  A
Sbjct:    1 MAEIKVPELAESISEGTIAQWLKQPGDYVEQGEYLLELETDKVNVELTAEESGVLQEVLKDSGDTVQVGEIIGTISEGAGESSA 84
[Close]
BLAST of EY690947 vs. ExPASy Swiss-Prot
Match: ODO2_RICBR (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia bellii (strain RML369-C) GN=sucB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.429e-11
Identity = 36/82 (43.90%), Postives = 55/82 (67.07%), Query Frame = 3 
Query:  357 VDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEGVA 602
            V  +VP +GES+T+ T+AK+ K  GD V+ DE + +IET+KVT++V SP  G I +++  +G  V  G +I  I++ GE VA
Sbjct:    3 VKIIVPSLGESVTEATIAKWYKKEGDAVKTDELLLEIETEKVTLEVNSPCNGTIGKIIKADGANVAVGEEIGDINE-GEAVA 83
The following BLAST results are available for this feature:
BLAST of EY690947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
ODO2_BACSU1.094e-1141.67Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RICBR5.429e-1143.90Dihydrolipoyllysine-residue succinyltransferase co... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-101-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690947 ID=EY690947; Name=EY690947; organism=Citrus sinensis; type=EST; length=873bp
AGACTCTCTCAAGAAAACGCAACTTGTTCTGTTCGATCAAGCAGGTACAT
ACCTGAACAACGATGCTGGGTGTTATACGGAGAAGGGTCGCGAGTGGAGG
CTCGCCTGCTTCGATTTTAGGGCATTCACTGCAGACAATGAGGCCTGCAA
TGTCTGTATCTAGAGTCTCATCTATTGCAGGAAAAGAGACGTTACTGCAT
TCAAGAGGATTAGGGCATATCCGGAATTTCAGTCATTTAATTTTTCCAGG
TTGCTCTAAGGGTTGTCAACCATTAAGGGATGTAATTTCTAGCACCCAGA
AAGCAACTAACATGTATCTGTGGAGCCATCCATTTTCTTCTGAAGGAGGG
GATTTGGTTGATGCTGTTGTCCCTTTTATGGGTGAATCCATAACCGATGG
TACTTTGGCAAAATTCTTGAAGGGTCCTGGTGATAGGGTGGAACTTGATG
AACCAATTGCTCAAATTGAAACCGATAAGGTAACGATTGATGTTGCAAGT
CCGGAAGCAGGTGTTATCAAAGAGCTTGTAGCCAAAGAAGGGGAGACTGT
GGAACCAGGTACCAAGATTGCTGTGATTTCAAAGTCTGGGGAAGGTGTAG
CTCATGTACCTCCCTCAAAAAAAATACCAGAAAAAGCTGCTCCTAAACCC
CCTTCTGCTGAAAAAGCAAAGGAGGAAAAGCCGCACCCTAAAGTTGAAAC
TTGTTCTGAGAAACAAAAACACCCTCTCACCCCCCTCTAACCGCCCTGGT
TACTGAACCCTCCCTTCCCCCCAAGGGAAAGGGAAAAAAAATTTCTTATG
ACACAACTTACCAAACCGACTTGCAACCCGAATTGAAAAATCCCCCAAAA
AAAATTTGGGAATGGTGGACTCC
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