EY690149

Overview
NameEY690149
Unique NameEY690149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIME (Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.048e-14
Identity = 35/54 (64.81%), Postives = 44/54 (81.48%), Query Frame = 2
Query:   62 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 223
            V  ++ PL+H++ AGAD ILIPSRFEPCGL QL+ +RYG VP+VA TGGL DT+
Sbjct:  352 VTGYDEPLSHLMQAGADAILIPSRFEPCGLTQLYGLRYGCVPVVARTGGLTDTI 405          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_THEAB (Glycogen synthase OS=Thermosipho africanus (strain TCF52B) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 36/76 (47.37%), Postives = 51/76 (67.11%), Query Frame = 2
Query:    2 KTMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 229
            K  E+  + +E  +P+K      F+I LA  I A +D  L+PSR+EPCGL Q++++RYGT+P+V  TGGL DTV E
Sbjct:  338 KKYEEMFKDIEKEFPDKMSANITFDIVLAQKIYASSDMFLMPSRYEPCGLGQMYSLRYGTIPVVRYTGGLADTVME 413          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPT (Glycogen synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 37/61 (60.66%), Postives = 44/61 (72.13%), Query Frame = 2
Query:   41 YPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 223
            YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV
Sbjct:  348 YPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTV 408          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPA (Glycogen synthase OS=Rhodopseudomonas palustris GN=glgA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 37/61 (60.66%), Postives = 44/61 (72.13%), Query Frame = 2
Query:   41 YPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 223
            YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV
Sbjct:  348 YPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTV 408          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_PSEF5 (Glycogen synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 2
Query:   11 EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 244
            E+ +  L   +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+E G TGF
Sbjct:  347 EQSMRALARRFPGRIGVHIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIENGVTGF 424          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_PROMT (Glycogen synthase OS=Prochlorococcus marinus (strain NATL2A) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 2
Query:    8 MEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 226
            +E  L QL I YP +      ++  L+ +I  GAD  L+PSRFEPCG+ QL AMRYG +PIV   GGLVDTVE
Sbjct:  315 LESSLWQLAIEYPGRFSVFLTYDDALSRLIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVE 387          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_PROM1 (Glycogen synthase OS=Prochlorococcus marinus (strain NATL1A) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 2
Query:    8 MEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 226
            +E  L QL I YP +      ++  L+ +I  GAD  L+PSRFEPCG+ QL AMRYG +PIV   GGLVDTVE
Sbjct:  315 LESSLWQLAIEYPGRFSVFLTYDDALSRLIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVE 387          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_HAEI8 (Glycogen synthase OS=Haemophilus influenzae (strain 86-028NP) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 2
Query:   11 EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 223
            E+ + +L   YP+       ++  L+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV
Sbjct:  335 EQGIRELAERYPQNIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTV 405          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_EXIS2 (Glycogen synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 2
Query:   11 EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVNAAAQTHH 313
            E   +    + P+K      F++ LA  I AG+D  L+PSRFEPCGL QL +M+YG++PIV  TGGL DTV+       EG  GF   +++   E +D +    +T+H
Sbjct:  340 EGLFQHASTIRPDKVASYIGFDVGLAQRIYAGSDAFLMPSRFEPCGLSQLISMKYGSLPIVRETGGLRDTVQPFNQFTLEG-NGFSFSNYNAQ-EFLDAIKRTIETYH 445          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_RHIEC (Glycogen synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glgA PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.202e-13
Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 2
Query:   71 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 223
            +N P++H++ AG D I+IPSRFEPCGL QL+A+RYG VPIVA TGGL DTV
Sbjct:  354 YNEPMSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCVPIVARTGGLNDTV 404          
The following BLAST results are available for this feature:
BLAST of EY690149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 343
Match NameE-valueIdentityDescription
GLGA1_RHIME7.048e-1464.81Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1... [more]
GLGA_THEAB9.205e-1447.37Glycogen synthase OS=Thermosipho africanus (strain... [more]
GLGA_RHOPT9.205e-1460.66Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_RHOPA9.205e-1460.66Glycogen synthase OS=Rhodopseudomonas palustris GN... [more]
GLGA_PSEF59.205e-1444.87Glycogen synthase OS=Pseudomonas fluorescens (stra... [more]
GLGA_PROMT9.205e-1453.42Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_PROM19.205e-1453.42Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_HAEI89.205e-1447.89Glycogen synthase OS=Haemophilus influenzae (strai... [more]
GLGA_EXIS29.205e-1439.81Glycogen synthase OS=Exiguobacterium sibiricum (st... [more]
GLGA_RHIEC1.202e-1368.63Glycogen synthase OS=Rhizobium etli (strain CFN 42... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-058-A10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690149 ID=EY690149; Name=EY690149; organism=Citrus sinensis; type=EST; length=887bp
AAAAACAATGGAGAAGCAGCTTGAACAGTTGGAGATACTGTACCCTGAGA
AAGCCAGAGGAGTAGCGAAATTCAATATTCCTCTGGCGCATATGATAATA
GCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTGGTCT
CATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCTTCCA
CTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCAGATG
GGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCCGTAAATGCGGCTGC
ACAGACCCACCACCCGCACGACCACCTCTCGCCACCAATCGGCACTCCGC
CCTCNGAAACAACTGAACGAAACTCGGATAGACACGGGAACCTTCGCGGA
GGGGGGGGGGAGGAAGCACACCGGACAGGACCCCCCCACGCGCCGCACGA
CCGAACGGGCCCCACACGCGACCGCCCCAAACCACGCACCCCCAGCGCGC
CGCCACGGCCGCGGCCCGCGCCCGACACACGCCCCCACACCACACCAACA
CACGCCACCCCAACAACCGGCGCCACACACACAACCACGCACAAGCACAC
ACAGAGCAGAAACCACGAACGACGTACCAACGAACCGACAACGAAAAGGC
CACCGAGACACGCGCCCGATAAAACCAACCAGGCCAAGACACAAAGCAGA
AGCGACACCCAGCGCGCACCCCGGACCGCGACCACAGAAACCCCCGCACA
CACACACCCCCGACCGACGCAGAACGCCGCGACGGCCGTGAGGACGAGCC
AACAAAACACCGAGCCACAACACCGACCGCACGACCCCAGACAAACCCCT
CCACGAGCGCCAGCCGACAAGACGCGGGACGACCACA
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