EY690149

Overview
NameEY690149
Unique NameEY690149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_THELT (Glycogen synthase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.326e-15
Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 2
Query:    2 KTMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 229
            K  E+  + +E  YP+K     KF++ LA  I A +D  L+PSR+EPCGL Q++++RYGTVPIV  TGGL D+V+E
Sbjct:  338 KKYEEFFKNIEKKYPQKISSNMKFDVDLAQKIYAASDMFLMPSRYEPCGLGQMYSLRYGTVPIVRYTGGLADSVKE 413          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_PSEPF (Glycogen synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=glgA PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.326e-15
Identity = 36/86 (41.86%), Postives = 56/86 (65.12%), Query Frame = 2
Query:   11 EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 268
            E+ + +L + +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+E G TGF     + D
Sbjct:  344 EQAMRELALRFPGQIGVRIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIENGVTGFLFNESTAD 429          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_GEOTN (Glycogen synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.326e-15
Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = 2
Query:   11 EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 226
            E+   Q+   YP K      F+ PLAH I AGAD  L+PS FEPCGL Q+ A+RYGT+PIV  TGGL DTV+
Sbjct:  336 EQFFSQMAAAYPGKVGVYIGFHEPLAHQIYAGADLFLMPSLFEPCGLSQMIALRYGTIPIVRETGGLNDTVQ 407          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_FLAJ1 (Glycogen synthase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.326e-15
Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = 2
Query:    8 MEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 223
            +E QL QL   Y         +N  LAH+I AG+D+IL+PSR EPCGL Q++AMRYGT+PIV  TGGL DTV
Sbjct:  333 IESQLTQLRNDYKGNYNVFIGYNEELAHLIYAGSDYILMPSRVEPCGLNQMYAMRYGTIPIVRRTGGLRDTV 404          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_BACSU (Glycogen synthase OS=Bacillus subtilis GN=glgA PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.326e-15
Identity = 44/93 (47.31%), Postives = 55/93 (59.14%), Query Frame = 2
Query:    2 KTMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGF-TGFQMGSFS 262
            +  E      E  + EK R    F+ PLAH I AG+D  L+PS+FEPCGL QL A++YG +PIV  TGGL DTV     EEG   GF   +F+
Sbjct:  334 REFEDYFRYAEFAFHEKCRAYIGFDEPLAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGAIPIVRETGGLYDTVRAYQEEEGTGNGFTFSAFN 426          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_BACC1 (Glycogen synthase OS=Bacillus cereus (strain ATCC 10987) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.326e-15
Identity = 48/108 (44.44%), Postives = 62/108 (57.41%), Query Frame = 2
Query:   11 EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVNAAAQTHH 313
            EK  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+       EG  GF   +F+   + +  V  A + +H
Sbjct:  336 EKFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEG-NGFSFTNFNAH-DMLHTVRRAIEFYH 441          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOMG (Glycogen synthase 1 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.326e-15
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 2
Query:   41 YPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 226
            YP+K      +N PL+H I AGADF L+PS FEPCGL Q++++RYGT+PIV +TGGL D+VE
Sbjct:  356 YPDKFNIFVGYNNPLSHQIEAGADFFLMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVE 417          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_VIBSL (Glycogen synthase OS=Vibrio splendidus (strain LGP32) GN=glgA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.087e-14
Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 2
Query:    8 MEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 229
            +  QL++L  L+ +K   V  +N  LAH++ AG+DF L+PS FEPCGL Q+++M YGT+PIV S GGL D+V +
Sbjct:  343 LASQLKELSALHSDKFSFVEAYNNELAHLVEAGSDFFLMPSEFEPCGLNQIYSMAYGTLPIVRSVGGLKDSVND 416          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.087e-14
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 2
Query:    5 TMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 223
            T+E+    L   YPE       ++ PLAH + AGAD  ++PSRFEPCGL Q++++RYGTVP+V +TGGL DTV
Sbjct:  338 TLEQTARSLAERYPEHMGLHIGYSEPLAHQLEAGADIFVMPSRFEPCGLNQMYSLRYGTVPVVRNTGGLADTV 410          
BLAST of EY690149 vs. ExPASy Swiss-Prot
Match: GLGA_GLOVI (Glycogen synthase OS=Gloeobacter violaceus GN=glgA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.087e-14
Identity = 41/100 (41.00%), Postives = 56/100 (56.00%), Query Frame = 2
Query:   41 YPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVNAAAQTHHPHD 322
            YP++ + V  +N+P+A  I  GAD  L+PSRFEPCG+ Q+ A+RYG VP+V  TGGL DTV      +E   GF    +       DP N  A  +   +
Sbjct:  325 YPDRIKAVLSYNVPIAQRIYGGADLFLMPSRFEPCGIGQMIALRYGAVPLVRKTGGLADTVFFHNPLDEKGNGFLFDRY-------DPANLLAMLYRAEE 417          
The following BLAST results are available for this feature:
BLAST of EY690149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 343
Match NameE-valueIdentityDescription
GLGA_THELT8.326e-1550.00Glycogen synthase OS=Thermotoga lettingae (strain ... [more]
GLGA_PSEPF8.326e-1541.86Glycogen synthase OS=Pseudomonas fluorescens (stra... [more]
GLGA_GEOTN8.326e-1555.56Glycogen synthase OS=Geobacillus thermodenitrifica... [more]
GLGA_FLAJ18.326e-1556.94Glycogen synthase OS=Flavobacterium johnsoniae (st... [more]
GLGA_BACSU8.326e-1547.31Glycogen synthase OS=Bacillus subtilis GN=glgA PE=... [more]
GLGA_BACC18.326e-1544.44Glycogen synthase OS=Bacillus cereus (strain ATCC ... [more]
GLGA1_GEOMG8.326e-1559.68Glycogen synthase 1 OS=Geobacter metallireducens (... [more]
GLGA_VIBSL1.087e-1450.00Glycogen synthase OS=Vibrio splendidus (strain LGP... [more]
GLGA_THISH1.087e-1452.05Glycogen synthase OS=Thioalkalivibrio sp. (strain ... [more]
GLGA_GLOVI1.087e-1441.00Glycogen synthase OS=Gloeobacter violaceus GN=glgA... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-058-A10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690149 ID=EY690149; Name=EY690149; organism=Citrus sinensis; type=EST; length=887bp
AAAAACAATGGAGAAGCAGCTTGAACAGTTGGAGATACTGTACCCTGAGA
AAGCCAGAGGAGTAGCGAAATTCAATATTCCTCTGGCGCATATGATAATA
GCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTGGTCT
CATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCTTCCA
CTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCAGATG
GGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCCGTAAATGCGGCTGC
ACAGACCCACCACCCGCACGACCACCTCTCGCCACCAATCGGCACTCCGC
CCTCNGAAACAACTGAACGAAACTCGGATAGACACGGGAACCTTCGCGGA
GGGGGGGGGGAGGAAGCACACCGGACAGGACCCCCCCACGCGCCGCACGA
CCGAACGGGCCCCACACGCGACCGCCCCAAACCACGCACCCCCAGCGCGC
CGCCACGGCCGCGGCCCGCGCCCGACACACGCCCCCACACCACACCAACA
CACGCCACCCCAACAACCGGCGCCACACACACAACCACGCACAAGCACAC
ACAGAGCAGAAACCACGAACGACGTACCAACGAACCGACAACGAAAAGGC
CACCGAGACACGCGCCCGATAAAACCAACCAGGCCAAGACACAAAGCAGA
AGCGACACCCAGCGCGCACCCCGGACCGCGACCACAGAAACCCCCGCACA
CACACACCCCCGACCGACGCAGAACGCCGCGACGGCCGTGAGGACGAGCC
AACAAAACACCGAGCCACAACACCGACCGCACGACCCCAGACAAACCCCT
CCACGAGCGCCAGCCGACAAGACGCGGGACGACCACA
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