EY690137

Overview
NameEY690137
Unique NameEY690137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_LEITA (60S ribosomal protein L40 OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.359e-14
Identity = 32/52 (61.54%), Postives = 43/52 (82.69%), Query Frame = 2
Query:  149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304
            ++EP+L+ALA+KYN +K +CR+CYARL  RA NCRKK CGH + LR KKK++
Sbjct:    1 VMEPTLVALAKKYNWEKKVCRRCYARLPVRATNCRKKACGHCSNLRMKKKLR 52          
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_LEIMA (60S ribosomal protein L40 OS=Leishmania major GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.359e-14
Identity = 32/52 (61.54%), Postives = 43/52 (82.69%), Query Frame = 2
Query:  149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304
            ++EP+L+ALA+KYN +K +CR+CYARL  RA NCRKK CGH + LR KKK++
Sbjct:    1 VMEPTLVALAKKYNWEKKVCRRCYARLPVRATNCRKKACGHCSNLRMKKKLR 52          
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.085e-13
Identity = 37/49 (75.51%), Postives = 39/49 (79.59%), Query Frame = 2
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFA KQLE+GRTL+DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76          
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_TRYBB (60S ribosomal protein L40 OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.723e-13
Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = 2
Query:  149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304
            ++EP+L ALA+KYN +K +CR+CYARL  RA NCRKK CGH + LR KKK++
Sbjct:    1 VMEPTLEALAKKYNWEKKVCRRCYARLPVRATNCRKKGCGHCSNLRMKKKLR 52          
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_TRYCR (60S ribosomal protein L40 OS=Trypanosoma cruzi GN=FUS1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.557e-13
Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = 2
Query:  149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304
            ++EP+L ALA+KYN +K +CR+CYARL  RA NCRKK CGH + LR KKK++
Sbjct:    1 VMEPTLEALAKKYNWEKKVCRRCYARLPVRASNCRKKACGHCSNLRMKKKLR 52          
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 5.678e-11
Identity = 32/48 (66.67%), Postives = 35/48 (72.92%), Query Frame = 2
Query:    5 KIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            KI DKEG+P DQ RLIFAGKQLED +T+ DYNIQKEST        GG
Sbjct:   29 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76          
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.685e-11
Identity = 32/48 (66.67%), Postives = 35/48 (72.92%), Query Frame = 2
Query:    5 KIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            KI DKEG+P DQ RLI+AGKQLED +TL DYNIQKEST        GG
Sbjct:   29 KIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76          
The following BLAST results are available for this feature:
BLAST of EY690137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
RL40_LEITA9.359e-1461.5460S ribosomal protein L40 OS=Leishmania tarentolae... [more]
RL40_LEIMA9.359e-1461.5460S ribosomal protein L40 OS=Leishmania major GN=U... [more]
UBIQ_LEITA2.085e-1375.51Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3... [more]
RL40_TRYBB2.723e-1361.5460S ribosomal protein L40 OS=Trypanosoma brucei br... [more]
RL40_TRYCR3.557e-1361.5460S ribosomal protein L40 OS=Trypanosoma cruzi GN=... [more]
UBIL_NPVAC5.678e-1166.67Ubiquitin-like protein OS=Autographa californica n... [more]
UBIL_NPVOP9.685e-1166.67Ubiquitin-like protein OS=Orgyia pseudotsugata mul... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-057-H06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690137 ID=EY690137; Name=EY690137; organism=Citrus sinensis; type=EST; length=574bp
AGCCAAGATCCAAGACAAGGAGGGTATTCCGCCGGACCAGCATAGACTTA
TCTTCGCTGGGAAGCAACTTGAGGATGGCCGTACTCTAACCGATTACAAT
ATCCAAAAGGAGTCAACTCTGCGTCTGGTTCTGAGGCTTCGTGGTGGTAT
TATTGAGCCTTCTTTGATGGCATTGGCAAGGAAGTATAACCAGGACAAGA
TGATCTGCCGAAAATGTTATGCACGCCTGCACCCCCGTGCTGTGAACTGC
AGGAAGAAGAAATGTGGGCACAACAACCAGCTGAGGCCAAAGAAGAAGAT
CAAGTAGATATTCTGCAGAGAAATGCTACATTTTATACTGAAACAGGATG
TTTTGCCTAGAATATGTAGCATCAACTATTGCCTAGTAATAGTTGTCACT
TAGTACGTGATTTCTGTTTCAAGATGTTTCCAGGGTTGAGAGTATTTGTA
AACTGATTACTATCGCCTCTATGTGCCCGTGACATTGAGCAATTTATTAA
TAACTTGCCTGAATCTACTATTTTCTTAAAAAAAAAAAAAAAAAAAAAAA
AAGGGAAGACAGACATCTAAAGAT
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