EY690137

Overview
NameEY690137
Unique NameEY690137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2065 contig Csv1_Contig2065:140..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_MANSE (Ubiquitin OS=Manduca sexta PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 39/49 (79.59%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_MACFA (Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 39/49 (79.59%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_ICTPU (Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 39/49 (79.59%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_HUMAN (Ubiquitin OS=Homo sapiens GN=RPS27A PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 39/49 (79.59%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_HORSE (Ubiquitin OS=Equus caballus GN=UBB PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 39/49 (79.59%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_GORGO (Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 39/49 (79.59%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_GEOCY (Ubiquitin OS=Geodia cydonium PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 39/49 (79.59%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_FELCA (Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 39/49 (79.59%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 39/49 (79.59%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 39/49 (79.59%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY690137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
UBIQ_MANSE1.106e-1479.59Ubiquitin OS=Manduca sexta PE=3 SV=1[more]
UBIQ_MACFA1.106e-1479.59Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=... [more]
UBIQ_ICTPU1.106e-1479.59Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV... [more]
UBIQ_HUMAN1.106e-1479.59Ubiquitin OS=Homo sapiens GN=RPS27A PE=1 SV=1[more]
UBIQ_HORSE1.106e-1479.59Ubiquitin OS=Equus caballus GN=UBB PE=3 SV=2[more]
UBIQ_GORGO1.106e-1479.59Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 S... [more]
UBIQ_GEOCY1.106e-1479.59Ubiquitin OS=Geodia cydonium PE=3 SV=1[more]
UBIQ_FELCA1.106e-1479.59Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1[more]
UBIQ_ENCCU1.106e-1479.59Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074... [more]
UBIQ_EIMBO1.106e-1479.59Ubiquitin OS=Eimeria bovis PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-057-H06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690137 ID=EY690137; Name=EY690137; organism=Citrus sinensis; type=EST; length=574bp
AGCCAAGATCCAAGACAAGGAGGGTATTCCGCCGGACCAGCATAGACTTA
TCTTCGCTGGGAAGCAACTTGAGGATGGCCGTACTCTAACCGATTACAAT
ATCCAAAAGGAGTCAACTCTGCGTCTGGTTCTGAGGCTTCGTGGTGGTAT
TATTGAGCCTTCTTTGATGGCATTGGCAAGGAAGTATAACCAGGACAAGA
TGATCTGCCGAAAATGTTATGCACGCCTGCACCCCCGTGCTGTGAACTGC
AGGAAGAAGAAATGTGGGCACAACAACCAGCTGAGGCCAAAGAAGAAGAT
CAAGTAGATATTCTGCAGAGAAATGCTACATTTTATACTGAAACAGGATG
TTTTGCCTAGAATATGTAGCATCAACTATTGCCTAGTAATAGTTGTCACT
TAGTACGTGATTTCTGTTTCAAGATGTTTCCAGGGTTGAGAGTATTTGTA
AACTGATTACTATCGCCTCTATGTGCCCGTGACATTGAGCAATTTATTAA
TAACTTGCCTGAATCTACTATTTTCTTAAAAAAAAAAAAAAAAAAAAAAA
AAGGGAAGACAGACATCTAAAGAT
back to top