EY690137

Overview
NameEY690137
Unique NameEY690137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2065 contig Csv1_Contig2065:140..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_MAIZE (Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPAL (Ubiquitin OS=Lupinus albus PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_LINUS (Ubiquitin OS=Linum usitatissimum PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_HORVU (Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_HELAN (Ubiquitin OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_DESAN (Ubiquitin OS=Deschampsia antarctica PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_DAUCA (Ubiquitin OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_BRARA (Ubiquitin OS=Brassica rapa PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY690137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
UBIQ_MAIZE1.444e-1479.59Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1[more]
UBIQ_LUPPO1.444e-1479.59Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1[more]
UBIQ_LUPAL1.444e-1479.59Ubiquitin OS=Lupinus albus PE=3 SV=1[more]
UBIQ_LINUS1.444e-1479.59Ubiquitin OS=Linum usitatissimum PE=3 SV=1[more]
UBIQ_HORVU1.444e-1479.59Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1[more]
UBIQ_HELAN1.444e-1479.59Ubiquitin OS=Helianthus annuus PE=3 SV=1[more]
UBIQ_DESAN1.444e-1479.59Ubiquitin OS=Deschampsia antarctica PE=2 SV=1[more]
UBIQ_DAUCA1.444e-1479.59Ubiquitin OS=Daucus carota PE=3 SV=1[more]
UBIQ_CHLRE1.444e-1479.59Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=... [more]
UBIQ_BRARA1.444e-1479.59Ubiquitin OS=Brassica rapa PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-057-H06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690137 ID=EY690137; Name=EY690137; organism=Citrus sinensis; type=EST; length=574bp
AGCCAAGATCCAAGACAAGGAGGGTATTCCGCCGGACCAGCATAGACTTA
TCTTCGCTGGGAAGCAACTTGAGGATGGCCGTACTCTAACCGATTACAAT
ATCCAAAAGGAGTCAACTCTGCGTCTGGTTCTGAGGCTTCGTGGTGGTAT
TATTGAGCCTTCTTTGATGGCATTGGCAAGGAAGTATAACCAGGACAAGA
TGATCTGCCGAAAATGTTATGCACGCCTGCACCCCCGTGCTGTGAACTGC
AGGAAGAAGAAATGTGGGCACAACAACCAGCTGAGGCCAAAGAAGAAGAT
CAAGTAGATATTCTGCAGAGAAATGCTACATTTTATACTGAAACAGGATG
TTTTGCCTAGAATATGTAGCATCAACTATTGCCTAGTAATAGTTGTCACT
TAGTACGTGATTTCTGTTTCAAGATGTTTCCAGGGTTGAGAGTATTTGTA
AACTGATTACTATCGCCTCTATGTGCCCGTGACATTGAGCAATTTATTAA
TAACTTGCCTGAATCTACTATTTTCTTAAAAAAAAAAAAAAAAAAAAAAA
AAGGGAAGACAGACATCTAAAGAT
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