EY690137

Overview
NameEY690137
Unique NameEY690137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2065 contig Csv1_Contig2065:140..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_AVESA (Ubiquitin OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_AVEFA (Ubiquitin OS=Avena fatua PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_ASPOF (Ubiquitin OS=Asparagus officinalis PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14
Identity = 39/49 (79.59%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AKIQDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14
Identity = 38/49 (77.55%), Postives = 39/49 (79.59%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            AK+QDKEGIPPDQ RLIFAGKQLEDGRTL DYNIQKEST        GG
Sbjct:   28 AKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.463e-14
Identity = 38/49 (77.55%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            +KIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 SKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.463e-14
Identity = 38/49 (77.55%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            +KIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 SKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_KLULA (Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.463e-14
Identity = 38/49 (77.55%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            +KIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 SKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.463e-14
Identity = 38/49 (77.55%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            +KIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 SKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: UBIQ_CANAL (Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.463e-14
Identity = 38/49 (77.55%), Postives = 40/49 (81.63%), Query Frame = 2 
Query:    2 AKIQDKEGIPPDQHRLIFAGKQLEDGRTLTDYNIQKESTXXXXXXXXGG 148
            +KIQDKEGIPPDQ RLIFAGKQLEDGRTL+DYNIQKEST        GG
Sbjct:   28 SKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY690137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
UBIQ_AVESA1.444e-1479.59Ubiquitin OS=Avena sativa PE=1 SV=1[more]
UBIQ_AVEFA1.444e-1479.59Ubiquitin OS=Avena fatua PE=3 SV=1[more]
UBIQ_ASPOF1.444e-1479.59Ubiquitin OS=Asparagus officinalis PE=3 SV=1[more]
UBIQ_ARATH1.444e-1479.59Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=... [more]
UBL1_ORYSJ1.886e-1477.55Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja... [more]
UBIQ_YEAST2.463e-1477.55Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1... [more]
UBIQ_SCHPO2.463e-1477.55Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=... [more]
UBIQ_KLULA2.463e-1477.55Ubiquitin OS=Kluyveromyces lactis GN=ubi3 PE=1 SV=... [more]
UBIQ_CRYNE2.463e-1477.55Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ... [more]
UBIQ_CANAL2.463e-1477.55Ubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-057-H06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690137 ID=EY690137; Name=EY690137; organism=Citrus sinensis; type=EST; length=574bp
AGCCAAGATCCAAGACAAGGAGGGTATTCCGCCGGACCAGCATAGACTTA
TCTTCGCTGGGAAGCAACTTGAGGATGGCCGTACTCTAACCGATTACAAT
ATCCAAAAGGAGTCAACTCTGCGTCTGGTTCTGAGGCTTCGTGGTGGTAT
TATTGAGCCTTCTTTGATGGCATTGGCAAGGAAGTATAACCAGGACAAGA
TGATCTGCCGAAAATGTTATGCACGCCTGCACCCCCGTGCTGTGAACTGC
AGGAAGAAGAAATGTGGGCACAACAACCAGCTGAGGCCAAAGAAGAAGAT
CAAGTAGATATTCTGCAGAGAAATGCTACATTTTATACTGAAACAGGATG
TTTTGCCTAGAATATGTAGCATCAACTATTGCCTAGTAATAGTTGTCACT
TAGTACGTGATTTCTGTTTCAAGATGTTTCCAGGGTTGAGAGTATTTGTA
AACTGATTACTATCGCCTCTATGTGCCCGTGACATTGAGCAATTTATTAA
TAACTTGCCTGAATCTACTATTTTCTTAAAAAAAAAAAAAAAAAAAAAAA
AAGGGAAGACAGACATCTAAAGAT
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