EY690128

Overview
NameEY690128
Unique NameEY690128
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690128 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.926e-25
Identity = 57/145 (39.31%), Postives = 81/145 (55.86%), Query Frame = 3
Query:    6 DEIDSVFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSK 437
            DEID  FLGN  G  + I TN++  G     RE ++ LWFDP+ DFH Y++ W    IIF +DGIPIR FK     G  +P  +PM +Y+++W+  DWAT GG+ ++++  AP+   + +F              S C  T SSK
Sbjct:  103 DEIDFEFLGNRTGHPYTIHTNVFTGGKGD--REMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYRNF-----------NDQSSCSRTSSSK 234          
BLAST of EY690128 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.885e-13
Identity = 41/127 (32.28%), Postives = 69/127 (54.33%), Query Frame = 3
Query:    3 HDEIDSVFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGC 380
            HDE+    LG   G  + + TN+Y  G    G+++R+ LWFDP+ D+H YS LW  +Q++FY+D  PIR + +   +   +P+ + M L  ++ +GS          ++ K  PY+ +F    + GC
Sbjct:   95 HDELCFQILGK-NGPPYLLNTNMYLYGEG--GKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVYSKNPDV--YYPSVQTMFLMGSVQNGS---------IIDPKQMPYIAKFQASKIEGC 207          
The following BLAST results are available for this feature:
BLAST of EY690128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH14_ARATH1.926e-2539.31Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH11_ARATH2.885e-1332.28Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-057-G02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690128 ID=EY690128; Name=EY690128; organism=Citrus sinensis; type=EST; length=790bp
ATCATGATGAAATAGACTCTGTGTTCTTGGGTAATATTAGAGGCAAAAAT
TGGAGGATTCAGACTAATATTTATGGCAATGGAAGCACCAGCATCGGAAG
AGAAGAGAGATACAATCTCTGGTTTGATCCTTCTGATGATTTCCATCAGT
ACAGTATTCTCTGGACTGATTCCCAGATCATATTTTATATAGACGGTATT
CCAATTAGGGAGTTTAAGAGAACTGCATCTATGGGAGGAGATTTTCCTGC
TAAGCCGATGTCTTTGTACGCCACAATCTGGGATGGCTCTGATTGGGCTA
CAAATGGTGGCAAATACCGAGTGAACTACAAATATGCTCCCTATGTGACT
GAATTCTCTGACTTCGTACTCCACGGATGTTCATTTGATCCTATTGAGCA
AACTTCTTCCAAGTGTGACATAACCGAAAGTTCCAAAGTATCCATCCCTA
CTGGCGCCTCGCCCTCCCCGCACAAACAAGATGGAACACTTTACGACGAA
CATATGACCTATTCCTAACTGTCTATGCACACATTCGATCTAAAGTTCCT
CCTTATTGAGTGAGTCATCGCCCCCCAAGCGCGGCAATGGCTTCCAGCGG
AAGATAACGAGACGTTGGGGAGGGAAAGACGGATCGCACCACGGGAGGAC
CCCCAACCACTCGCGGCACGCGAACAAGAGACGCGACGCCGTGCAGGGAA
CGCGGCCACCCCGGCGCGAACCACGCAACTCGCCCCGAACAGACGCTGGC
ATCCACCACCCAAACCTAGACACGAAAACGACGCGAGGAG
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