EY690125

Overview
NameEY690125
Unique NameEY690125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_PROMS (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain AS9601) GN=psaL PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.143e-13
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 3
Query:  207 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLV 434
            DP +G+L TP+ S      +++NLP YR  +SP  RG+E G A G+LL GPF   GPL+N+E A   G LAA G V
Sbjct:   44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSEFALTAGLLAAIGAV 119          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_PROM2 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9215) GN=psaL PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.655e-13
Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 3
Query:  207 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLV 434
            DP +G+L TP+ S      +++NLP YR  +SP  RG+E G A G+LL GPF   GPL+N+E A   G L+A G V
Sbjct:   44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSEFAVTAGLLSAIGAV 119          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_PROMP (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=psaL PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.773e-13
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  189 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLV 434
            ++P++ DP +G+L TP+ S      +++NLP YR  +SP  RG+E G A G+LL GPF   GPL+N++ A   G LA  G V
Sbjct:   39 VKPVS-DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFSMTGPLRNSDFALTAGLLATIGAV 119          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_PROM5 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9515) GN=psaL PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.773e-13
Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 3
Query:  207 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLV 434
            DP +G+L TP+ S      +++NLP YR  +SP  RG+E G A G+LL GPF   GPL+N++ A   G LAA G V
Sbjct:   44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSDFAITAGLLAAIGAV 119          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_PROM0 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9301) GN=psaL PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.234e-13
Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 3
Query:  207 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLV 434
            DP +G+L TP+ S      +++NLP YR  +SP  RG+E G A G+LL GPF   GPL+N+E A   G LA  G V
Sbjct:   44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSEFALTAGLLATIGAV 119          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_GLOVI (Photosystem I reaction center subunit XI OS=Gloeobacter violaceus GN=psaL PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.234e-13
Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 3
Query:  207 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLVV 437
            DP  G+L TP+ +S  I W++ NLP  R  +    RG+E+G+AHG+ L+GPF   GPL+NTE+    G ++  GL++
Sbjct:   11 DPQEGTLLTPVNNSTAIRWFIDNLPINRVGMDEFTRGLEIGMAHGYWLIGPFALLGPLRNTELGLVAGLVSTIGLLL 87          
BLAST of EY690125 vs. ExPASy Swiss-Prot
Match: PSAL_PROMA (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus GN=psaL PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12
Identity = 37/82 (45.12%), Postives = 51/82 (62.20%), Query Frame = 3
Query:  189 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFDKAGPLKNTEIAGPEGSLAAGGLV 434
            + P++ DP +G+L TP+ S      +L+NLP YR  +SP  RG+EVG A G+LL GP+   GPL+NT+ A   G L   G V
Sbjct:   39 VTPVS-DPCVGNLSTPVNSGYFTKAFLNNLPFYRGGLSPNFRGLEVGAAFGYLLYGPYAMTGPLRNTDYALTAGLLGTIGAV 119          
The following BLAST results are available for this feature:
BLAST of EY690125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
PSAL_PROMS2.143e-1348.68Photosystem I reaction center subunit XI OS=Prochl... [more]
PSAL_PROM23.655e-1347.37Photosystem I reaction center subunit XI OS=Prochl... [more]
PSAL_PROMP4.773e-1343.90Photosystem I reaction center subunit XI OS=Prochl... [more]
PSAL_PROM54.773e-1347.37Photosystem I reaction center subunit XI OS=Prochl... [more]
PSAL_PROM06.234e-1347.37Photosystem I reaction center subunit XI OS=Prochl... [more]
PSAL_GLOVI6.234e-1342.86Photosystem I reaction center subunit XI OS=Gloeob... [more]
PSAL_PROMA1.389e-1245.12Photosystem I reaction center subunit XI OS=Prochl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-057-F11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690125 ID=EY690125; Name=EY690125; organism=Citrus sinensis; type=EST; length=771bp
CAATTCAAATGGCTTCTGTTTCTTCTCCAATGGCCAGCCAGCTCAAGAGT
AGCTTTACTTCACCAGTTTCCAGGAGCCTGCTTACTCCAAGGGGTATCTC
TGGATCTCCATTCGGGGTTGTTCCCTCCAAGAGAAGCCCTCGTTTCCTTG
TCAAAGCTATCCAATCTGAAAAGCCAACTTACCAAGTTATTCAGCCAATC
AATGGTGATCCATTCATTGGAAGCTTGGAGACTCCAATTACATCAAGTCC
ATTGATTGCATGGTACCTCTCAAATCTACCAGCTTATCGGACGGCAGTCA
GCCCACTACTGAGAGGAGTAGAGGTGGGGTTGGCCCATGGATTCCTCCTT
GTGGGTCCATTTGATAAGGCAGGGCCATTGAAAAACACTGAAATAGCAGG
ACCAGAAGGGTCATTGGCAGCTGGTGGACTTGTTGTGAACCATCAGCATT
TGCTTGACTATCTATGAGATTGCTTACTTCCGTGAAGGAAAAGCCTCCAC
TGCTCCAGGTTTAACATTGACCATTAAGGAAAAAGGACGTTGATCAATTG
CCACTATCTGATGGAGTGGGCTAAGTGCACTGGGAGGATTCTTCTTTGGT
GGGAATTTCTGCCGCCCCTTGCCCTCACTATCCTGCCTTTCCGCCCGTAA
CCATCCACACATACGGGCGCTTGGATATATGACAAATCAAACCCATAGGC
TTAAGAAACCAATGACGCCACACGGTGCAAACCCTGCCGGCAGACCTAGT
CTACGCCTGGTTATCGGGACA
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