EY688713 | Citrus Genome Database

Overview


Name	EY688713
Unique Name	EY688713
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	846

Libraries


Library Name	Type
Sweet orange bark, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PATJ1_SOLTU (Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.273e-17
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 1

Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIPGTIL FLE QLQ +D    AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AA +I  FYF+H P IF
Sbjct:   42 IIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIF 114

HSP 2 Score: 70.0922 bits (170), Expect = 1.769e-11
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 2

Query:  416 PRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            P    S   ++  P YDGKY+  +    LGE  +   LT + I +FD+K  +PVIF+ ++       +A++ D+C  T+AAP Y P H FVT     G T  F+L D
Sbjct:  111 PHIFNSSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVD 216

[Close]

BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PATA3_SOLTU (Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.273e-17
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 1

Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIPGTIL FLE QLQ +D    AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AA +I  FYF+H P IF
Sbjct:   42 IIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIF 114

HSP 2 Score: 74.7146 bits (182), Expect = 7.183e-13
Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 2

Query:  416 PRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            P    S   ++  P YDGKY+  +    LGE  +   LT + I +FD+K  +PVIF+ ++       +A++ D+C  T+AAPTY P H F T + I GD   F+L D
Sbjct:  111 PHIFNSSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFAT-NTINGDKYEFNLVD 216

[Close]

BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PATA2_SOLTU (Patatin group A-2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.273e-17
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 1

Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIPGTIL FLE QLQ +D    AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AA +I  FYF+H P IF
Sbjct:   42 IIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIF 114

HSP 2 Score: 72.7886 bits (177), Expect = 2.730e-12
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 2

Query:  416 PRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            P    S   ++  P YDGKY+  +    LGE  +   LT + I +FD+K  +PVIF+ ++       +A++ D+C   +AAPTY P H F T + I GD   F+L D
Sbjct:  111 PHIFNSSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSAAAAPTYFPPHYFAT-NTINGDKYEFNLVD 216

[Close]

BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PAT17_SOLCD (Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.273e-17
Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 1

Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIP TIL FLE QLQ++D    AR+ADYFD++ GTSTGGL+  M++ P+++ RP  AAK+I  FYF+H P+IF
Sbjct:   42 IIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEIVPFYFEHGPQIF 114

HSP 2 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 38/104 (36.54%), Postives = 60/104 (57.69%), Query Frame = 2

Query:  425 VTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            + +P  + + P YDGKY+  +    LGE  +   LT ++I +FD+K  +PVIF+ ++       +A++ D+   T+AAPTY P H FVT +   GD   F+L D
Sbjct:  113 IFNPSGQILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKMYDISYSTAAAPTYFPPHYFVT-NTSNGDEYEFNLVD 215

[Close]

BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PAT16_SOLTU (Patatin-16 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.273e-17
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 1

Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIPGTIL FLE QLQ +D    AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AA +I  FYF+H P IF
Sbjct:   42 IIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIF 114

HSP 2 Score: 68.9366 bits (167), Expect = 3.941e-11
Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = 2

Query:  461 YDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            YDGKY+  +    LGE  +   LT + I +FD+K  +PVIF+ ++       +A++ D+C  T+AAPTY P H F T + I GD    +L D
Sbjct:  125 YDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFAT-NTINGDKYELNLVD 215

[Close]

BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PAT02_SOLTU (Patatin-02 OS=Solanum tuberosum GN=StPat14K07.03 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.273e-17
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 1

Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIPGTIL FLE QLQ +D    AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AA +I  FYF+H P IF
Sbjct:   42 IIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIF 114

HSP 2 Score: 74.7146 bits (182), Expect = 7.183e-13
Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 2

Query:  416 PRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            P    S   ++  P YDGKY+  +    LGE  +   LT + I +FD+K  +PVIF+ ++       +A++ D+C  T+AAPTY P H F T + I GD   F+L D
Sbjct:  111 PHIFNSSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFAT-NTINGDKYEFNLVD 216

[Close]

BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PAT01_SOLTU (Patatin-01 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.273e-17
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 1

Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIPGTIL FLE QLQ +D    AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AA +I  FYF+H P IF
Sbjct:   42 IIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIF 114

HSP 2 Score: 74.7146 bits (182), Expect = 7.183e-13
Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 2

Query:  416 PRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            P    S   ++  P YDGKY+  +    LGE  +   LT + I +FD+K  +PVIF+ ++       +A++ D+C  T+AAPTY P H F T + I GD   F+L D
Sbjct:  111 PHIFNSSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFAT-NTINGDKYEFNLVD 216

[Close]

BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PT2K4_SOLTU (Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.662e-17
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 1

Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIP  IL FLE QLQ++D    AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AAKDI  FYF+H P IF
Sbjct:   30 IIPAIILEFLEGQLQEVDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF 102

HSP 2 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 2

Query:  455 PMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            PMYDGKY+  +    LGE  +   LT + I +FD+K  +PVIF+ ++       +A++ D+C  T+AAP Y P H FVT     GD   F+L D
Sbjct:  111 PMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDAKMYDICYSTAAAPIYFPPHYFVTHTS-NGDRYEFNLVD 203

[Close]

BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PATM3_SOLTU (Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.171e-17
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 1

Query:    1 IIPGTILAFLESQLQDLDGPK-ARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIP  IL FLE QLQ++D  K AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AAKDI  FY +H P IF
Sbjct:   42 IIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYLEHGPHIF 114

HSP 2 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 37/96 (38.54%), Postives = 55/96 (57.29%), Query Frame = 2

Query:  449 VRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            + PMYDGKY+  +    LGE  +   LT + I +FD+K  +PVIF+ ++       +A++ D+C  T+AAP Y P H F+T     GD   F+L D
Sbjct:  121 IGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVD 215

[Close]

BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PATD3_SOLTU (Patatin group D-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17
Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 1

Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIPGTIL FLE QLQ +D    AR+ADYFD++ GTSTGGL+ +M+T P+++ RP  AA +I  F+F+H P IF
Sbjct:   42 IIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTSMITTPNENNRPFAAANEIVPFFFEHGPHIF 114

HSP 2 Score: 72.4034 bits (176), Expect = 3.565e-12
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 2

Query:  416 PRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            P    S   ++  P YDGKY+  +    LGE  +   LT + I + D+K  +PVIF+ ++       +A++ D+C  T+AAPTY P H F T + I GD   F+L D
Sbjct:  111 PHIFNSSTGQFFGPKYDGKYLMQVLQENLGETRVHQALTEVAISSLDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFTT-NTINGDKYEFNLVD 216

The following BLAST results are available for this feature:

BLAST of EY688713 vs. ExPASy Swiss-Prot

BLAST of EY688713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34


Match Name	E-value	Identity	Description
PATJ1_SOLTU	1.273e-17	58.90	Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1	[more]
PATA3_SOLTU	1.273e-17	58.90	Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1	[more]
PATA2_SOLTU	1.273e-17	58.90	Patatin group A-2 OS=Solanum tuberosum PE=2 SV=1	[more]
PAT17_SOLCD	1.273e-17	57.53	Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1	[more]
PAT16_SOLTU	1.273e-17	58.90	Patatin-16 OS=Solanum tuberosum PE=2 SV=1	[more]
PAT02_SOLTU	1.273e-17	58.90	Patatin-02 OS=Solanum tuberosum GN=StPat14K07.03 P...	[more]
PAT01_SOLTU	1.273e-17	58.90	Patatin-01 OS=Solanum tuberosum PE=2 SV=1	[more]
PT2K4_SOLTU	1.662e-17	58.90	Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 ...	[more]
PATM3_SOLTU	2.171e-17	58.90	Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1	[more]
PATD3_SOLTU	2.835e-17	57.53	Patatin group D-3 OS=Solanum tuberosum PE=2 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C2-003-091-F10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY688713 ID=EY688713; Name=EY688713; organism=Citrus sinensis; type=EST; length=846bp
ATCATTCCTGGCACTATTTTGGCCTTTCTTGAATCCCAGCTTCAGGATCT
GGACGGACCCAAGGCGAGAATTGCAGATTATTTCGATATAGTTTCAGGAA
CAAGCACAGGTGGGCTAATAGCCACCATGCTTACAGCCCCCGACAAGGAC
CGCAGACCTATTTTTGCTGCAAAGGATATCAACAAATTTTATTTTAAGCA
CTGTCCTGAAATTTTCCCTCAAGATAGGTAATTAAAAAATCCTAATTAAT
TGTCTTCTTTTAGCTTAAATTTTGTATAAGATTCAAATGATGTTCTTGTT
ATAATTAATGTGCTGATGGGTAGTTGAGCGTTTCGAGAACCGAATTAGAA
AGGATTTCTCTGATGAAAATAAATTTTCGGTCTGAAATTAATGATGGATC
AGCTGTAAGAATTTTCCAAGATCAGTTACAAGCCCTTTGCGTAAGTGGGT
ACGACCAATGTACGATGGGAAGTACATGCGGACTCTTACGAACAGGATAC
TAGGAGAAATTACCATCAAAGATACCCTAACAAATTTGATCATTCCAACT
TTTGACGTCAAGCGGCTTCAGCCAGTGATATTCTCAACCAATGATGGAAA
AATACATGCTTTGAAGAATGCCCGGCTGGCTGATATGTGCATTGGCACCT
CTGCAGCTCCCACCTACTTACCAGCGCACTGCTTTGTGACAAAAGATCCC
ATTACGGGCGACACATGTTGGTTTGATCTCTTTGATGGTGGGGGTTGCGG
AAAATGACCCTGTAAGTAACTTCATTTTTTTGAACTGGGGGGGCCTAATT
GGGGAATTGGAAATTAAAATTTATAATAAAAATTTGTAAAAAATGG