EY688713

Overview
NameEY688713
Unique NameEY688713
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PATD2_SOLTU (Patatin group D-2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17
Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 1
Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIPGTIL FLE QLQ +D    AR+ADYFD++ GTSTGGL+ +M+T P+++ RP  AA +I  F+F+H P IF
Sbjct:   42 IIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTSMITTPNENNRPFAAANEIVPFFFEHGPHIF 114          

HSP 2 Score: 76.6406 bits (187), Expect = 1.890e-13
Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = 2
Query:  416 PRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            P    S   ++  P YDGKY+  +    LGE  +   LT + I +FD+K  +PVIF+ +D       +A++ D+C  T+AAPTY P H F T + I GD   F+L D
Sbjct:  111 PHIFNSSTGQFFGPKYDGKYLMQVLQENLGETRVHQALTEVAISSFDIKTNKPVIFTKSDLAKSPELDAKMYDICYSTAAAPTYFPPHYFTT-NTINGDKYEFNLVD 216          
BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PAT08_SOLTU (Patatin-08 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17
Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 1
Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIPGTIL FLE QLQ +D    AR+ADYFD++ GTSTGGL+ +M+T P+++ RP  AA +I  F+F+H P IF
Sbjct:   42 IIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTSMITTPNENNRPFAAANEIVPFFFEHGPHIF 114          

HSP 2 Score: 74.7146 bits (182), Expect = 7.183e-13
Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 2
Query:  416 PRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            P    S   ++  P YDGKY+  +    LGE  +   LT + I +FD+K  +PVIF+ ++       +A++ D+C  T+AAPTY P H F T + I GD   F+L D
Sbjct:  111 PHIFNSSTGQFFGPKYDGKYLMQVLQENLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFTT-NTINGDKYEFNLVD 216          
BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PAT11_SOLTU (Patatin-11 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17
Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = 1
Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIPG I  FLE QLQ +D    AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AAKDI  FYF+H P IF
Sbjct:   42 IIPGIIPEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIF 114          

HSP 2 Score: 70.0922 bits (170), Expect = 1.769e-11
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 2
Query:  416 PRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            P    S   ++  P YDGKY+  +    LGE  +   LT + I +FD+K  +PVIF+ ++       +A++ D+C  T+AAP Y P H FVT     G T  F+L D
Sbjct:  111 PHIFNSSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVD 216          
BLAST of EY688713 vs. ExPASy Swiss-Prot
Match: PAT12_SOLTU (Patatin-12 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.249e-17
Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 1
Query:    1 IIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIF 216
            IIPGTIL FL  QLQ +D    AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AA +I  FYF+H P IF
Sbjct:   42 IIPGTILEFLGGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIF 114          

HSP 2 Score: 70.8626 bits (172), Expect = 1.037e-11
Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 2
Query:  416 PRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRLQPVIFSTNDGKIHALKNARLADMCIGTSAAPTYLPAHCFVTKDPITGDTCWFDLFD 736
            P    S   ++  P YDGKY+  +    LGE  +   LT + I +FD+K  +PVIF+ ++       +A++ D+C  T+AAP Y P H F+T     GD   F+L D
Sbjct:  111 PHIFNSSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVD 216          
The following BLAST results are available for this feature:
BLAST of EY688713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PATD2_SOLTU2.835e-1757.53Patatin group D-2 OS=Solanum tuberosum PE=2 SV=1[more]
PAT08_SOLTU2.835e-1757.53Patatin-08 OS=Solanum tuberosum PE=2 SV=1[more]
PAT11_SOLTU3.703e-1758.90Patatin-11 OS=Solanum tuberosum PE=2 SV=1[more]
PAT12_SOLTU8.249e-1757.53Patatin-12 OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-F10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688713 ID=EY688713; Name=EY688713; organism=Citrus sinensis; type=EST; length=846bp
ATCATTCCTGGCACTATTTTGGCCTTTCTTGAATCCCAGCTTCAGGATCT
GGACGGACCCAAGGCGAGAATTGCAGATTATTTCGATATAGTTTCAGGAA
CAAGCACAGGTGGGCTAATAGCCACCATGCTTACAGCCCCCGACAAGGAC
CGCAGACCTATTTTTGCTGCAAAGGATATCAACAAATTTTATTTTAAGCA
CTGTCCTGAAATTTTCCCTCAAGATAGGTAATTAAAAAATCCTAATTAAT
TGTCTTCTTTTAGCTTAAATTTTGTATAAGATTCAAATGATGTTCTTGTT
ATAATTAATGTGCTGATGGGTAGTTGAGCGTTTCGAGAACCGAATTAGAA
AGGATTTCTCTGATGAAAATAAATTTTCGGTCTGAAATTAATGATGGATC
AGCTGTAAGAATTTTCCAAGATCAGTTACAAGCCCTTTGCGTAAGTGGGT
ACGACCAATGTACGATGGGAAGTACATGCGGACTCTTACGAACAGGATAC
TAGGAGAAATTACCATCAAAGATACCCTAACAAATTTGATCATTCCAACT
TTTGACGTCAAGCGGCTTCAGCCAGTGATATTCTCAACCAATGATGGAAA
AATACATGCTTTGAAGAATGCCCGGCTGGCTGATATGTGCATTGGCACCT
CTGCAGCTCCCACCTACTTACCAGCGCACTGCTTTGTGACAAAAGATCCC
ATTACGGGCGACACATGTTGGTTTGATCTCTTTGATGGTGGGGGTTGCGG
AAAATGACCCTGTAAGTAACTTCATTTTTTTGAACTGGGGGGGCCTAATT
GGGGAATTGGAAATTAAAATTTATAATAAAAATTTGTAAAAAATGG
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