EY688710

Overview
NameEY688710
Unique NameEY688710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_CLOCE (DNA mismatch repair protein mutS OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21
Identity = 54/126 (42.86%), Postives = 80/126 (63.49%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLV--ERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA 373
            +E A++L  AT+ SL++LDE+GRGTSTFDG +IA+AV   +V  E++ CR LFATHYH LT+         L+      K+      +  ++++FL ++  G    SYG+QVA +AGVPQ V++ A
Sbjct:  681 SEVANILINATKRSLLVLDEIGRGTSTFDGLSIAWAVIEYIVNKEQLGCRTLFATHYHELTE---------LEGKLPGIKNYCITVKEKGEDVIFLRKIIRGGADGSYGIQVAKLAGVPQSVIDRA 797          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURP1 (DNA mismatch repair protein mutS OS=Burkholderia pseudomallei (strain 1710b) GN=mutS PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21
Identity = 57/139 (41.01%), Postives = 80/139 (57.55%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGES 415
            TE A++L  AT  SLV++DE+GRGTSTFDG A+A+A+ R L+    C  LFATHY  LT+     P     H++     +          +VFL+ +  G   +SYGLQVA +AGVP  V+ AA  H A   ++S  ++
Sbjct:  695 TEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHYFELTQLPVEFPQAANVHLSAVEHGHG---------IVFLHAVEEGPANQSYGLQVAQLAGVPAPVIRAARKHLAHLEQQSAAQA 824          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_ACIAC (DNA mismatch repair protein mutS OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21
Identity = 55/137 (40.15%), Postives = 76/137 (55.47%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGE 412
            TE A +L  AT  SLV++DE+GRGTSTFDG A+A  +   L +R     LFATHY  LT+  A H H    H+           ++   ++VFL+ +  G    SYG+ VA +AGVP  V+  A HA  A+++   E
Sbjct:  710 TEAAQILHAATPHSLVLMDEIGRGTSTFDGLALASGIATHLHDRTRAFTLFATHYFELTELAARHAHAVNVHVGA---------TESGSDIVFLHEIQPGPASRSYGIHVARLAGVPAPVLNHARHALSALEERANE 837          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_SHEB8 (DNA mismatch repair protein mutS OS=Shewanella baltica (strain OS185) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21
Identity = 51/126 (40.48%), Postives = 77/126 (61.11%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASH 379
            TETA++L  AT  SLV++DE+GRGTST+DG ++A++    L +++    LFATHY  LT+         L  +     +   +  + D  + F++ +  GA  +SYGLQVA +AGVP KV++AA H
Sbjct:  679 TETANILHNATASSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYFELTQ---------LPELMAGVYNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPNKVIKAAKH 795          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_SHEB5 (DNA mismatch repair protein mutS OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21
Identity = 51/126 (40.48%), Postives = 77/126 (61.11%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASH 379
            TETA++L  AT  SLV++DE+GRGTST+DG ++A++    L +++    LFATHY  LT+         L  +     +   +  + D  + F++ +  GA  +SYGLQVA +AGVP KV++AA H
Sbjct:  679 TETANILHNATASSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYFELTQ---------LPELMAGVYNVHLDAIEHDDTIAFMHTVQEGAASKSYGLQVAALAGVPNKVIKAAKH 795          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_SHEB2 (DNA mismatch repair protein mutS OS=Shewanella baltica (strain OS223) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21
Identity = 51/126 (40.48%), Postives = 77/126 (61.11%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASH 379
            TETA++L  AT  SLV++DE+GRGTST+DG ++A++    L +++    LFATHY  LT+         L  +     +   +  + D  + F++ +  GA  +SYGLQVA +AGVP KV++AA H
Sbjct:  679 TETANILHNATASSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYFELTQ---------LPELMAGVYNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPNKVIKAAKH 795          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_MESSB (DNA mismatch repair protein mutS OS=Mesorhizobium sp. (strain BNC1) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21
Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYH---PLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA 373
            ETA++L +A + SLVILDE+GRGT+TFDG +IA+A    L E+  CR LFATH+H    LT++ +   +VT++              + + E++FL+ +  GA   SYG+QVA +AG+PQ VVE A
Sbjct:  694 ETAAILNQAGERSLVILDEIGRGTATFDGLSIAWAAVEYLHEKNRCRALFATHFHEMTALTEKLSRLVNVTMR------------VKEFEGEVIFLHEVARGAADRSYGIQVARLAGLPQTVVERA 807          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_CLOBH (DNA mismatch repair protein mutS OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21
Identity = 59/179 (32.96%), Postives = 100/179 (55.87%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLV--ERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSSEQRSEFSSLHEEWLKTIVNVSRVDCNSDDDDAYDTL 535
            E +++L+ AT  SLV+LDE+GRGTST+DG +IA++V   +   + + C+ LFATHYH LTK         L+      K+ S + S+ + E+VFL ++  G   +SYG++VA +AG+P  V+  A      ++    E+  +     E+ S  +++++   + S    N   +  +DTL
Sbjct:  677 EVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK---------LEDNIEGVKNYSVSVSELENEIVFLRKIIKGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDKEENSLNIAPSKEYKS--KDYIEVSKDTSNTKNNLGSEIKHDTL 844          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_CLOB1 (DNA mismatch repair protein mutS OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21
Identity = 59/179 (32.96%), Postives = 100/179 (55.87%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLV--ERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSSEQRSEFSSLHEEWLKTIVNVSRVDCNSDDDDAYDTL 535
            E +++L+ AT  SLV+LDE+GRGTST+DG +IA++V   +   + + C+ LFATHYH LTK         L+      K+ S + S+ + E+VFL ++  G   +SYG++VA +AG+P  V+  A      ++    E+  +     E+ S  +++++   + S    N   +  +DTL
Sbjct:  677 EVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK---------LEDNIEGVKNYSVSVSELENEIVFLRKIIKGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDKEENSLNIAPSKEYKS--KDYIEVSKDTSNTKNNLGSEIKHDTL 844          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MSH3_ASPTN (DNA mismatch repair protein msh3 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=msh3 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21
Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSI 406
            +ETA +L++AT  SLVILDELGRGTST DG AIA AV   +V  +    LF THY  L+    S P+  L+++   F   +E+ S  D+E+ FLY +  G    SYGL VA +A +P  ++E A   +  +++ I
Sbjct:  949 SETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRSLRSLTLFITHYQHLSSMVHSFPNHELRNVHMRF---TESGSGQDEEITFLYEVGEGVAHRSYGLNVARLANLPVPLIEVAKQKSAELEQKI 1080          
The following BLAST results are available for this feature:
BLAST of EY688710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MUTS_CLOCE6.491e-2142.86DNA mismatch repair protein mutS OS=Clostridium ce... [more]
MUTS_BURP16.491e-2141.01DNA mismatch repair protein mutS OS=Burkholderia p... [more]
MUTS_ACIAC6.491e-2140.15DNA mismatch repair protein mutS OS=Acidovorax ave... [more]
MUTS_SHEB88.478e-2140.48DNA mismatch repair protein mutS OS=Shewanella bal... [more]
MUTS_SHEB58.478e-2140.48DNA mismatch repair protein mutS OS=Shewanella bal... [more]
MUTS_SHEB28.478e-2140.48DNA mismatch repair protein mutS OS=Shewanella bal... [more]
MUTS_MESSB8.478e-2144.44DNA mismatch repair protein mutS OS=Mesorhizobium ... [more]
MUTS_CLOBH8.478e-2132.96DNA mismatch repair protein mutS OS=Clostridium bo... [more]
MUTS_CLOB18.478e-2132.96DNA mismatch repair protein mutS OS=Clostridium bo... [more]
MSH3_ASPTN8.478e-2142.22DNA mismatch repair protein msh3 OS=Aspergillus te... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-F07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688710 ID=EY688710; Name=EY688710; organism=Citrus sinensis; type=EST; length=679bp
CACAGAGACGGCATCAGTTCTTCAGAAAGCCACTCAAGATTCTCTGGTAA
TTCTTGATGAACTGGGTCGAGGAACAAGCACTTTTGATGGATATGCCATT
GCCTACGCTGTATTCCGCCAACTTGTTGAAAGGATCAATTGTCGGTTGCT
ATTTGCAACACATTACCATCCACTCACAAAAGAATTTGCTTCTCATCCGC
ATGTTACTCTACAACATATGGCTTGTGCTTTCAAGTCAAACTCTGAAAAC
TATTCGAAAGGTGATCAAGAGCTGGTTTTTCTCTACCGCCTTACTTCCGG
AGCATGCCCAGAGAGCTATGGGTTGCAAGTGGCTGTAATGGCTGGGGTTC
CACAAAAGGTGGTTGAGGCAGCATCACATGCTGCTCTAGCAATGAAAAAA
TCAATAGGAGAAAGTTTCAAGTCGAGTGAACAGAGATCAGAGTTCTCAAG
TCTCCATGAAGAGTGGTTGAAGACCATTGTAAATGTCTCAAGGGTTGATT
GTAATTCCGATGATGATGATGCTTATGACACATTGTTTTGTTTGTGGCAT
GAGCTAAAGAATTCATATCAGTTGCACAACTAAAAGAGAAGGTGGCAAAG
ATAATGATTGCTACATGACTTTGCCTAATTGCCTTAATCAATTTTTCTTT
GTGTAAAAAAAAAAAAAAAAAAAAAAAAA
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