EY688710

Overview
NameEY688710
Unique NameEY688710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_STAAC (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain COL) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20
Identity = 61/153 (39.87%), Postives = 86/153 (56.21%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-----SHAALAMKKSIGESFKSSEQRSEFS 448
            E    L  AT+DSL+I DE+GRGTST+DG A+A A+   + E  + + LF+THYH LT    + P +   H+A        N  KG  EL+FL+++  GA  +SYG+QVA +A +P+KV+  A        A A KKS   + K  E   E +
Sbjct:  664 EAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAA-------NEYKG--ELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFEASAGKKSSISNLKMVENEPEIN 807          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_STAA9 (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain JH9) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20
Identity = 61/153 (39.87%), Postives = 86/153 (56.21%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-----SHAALAMKKSIGESFKSSEQRSEFS 448
            E    L  AT+DSL+I DE+GRGTST+DG A+A A+   + E  + + LF+THYH LT    + P +   H+A        N  KG  EL+FL+++  GA  +SYG+QVA +A +P+KV+  A        A A KKS   + K  E   E +
Sbjct:  664 EAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAA-------NEYKG--ELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFEASAGKKSSISNLKMVENEPEIN 807          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_STAA8 (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain NCTC 8325) GN=mutS PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20
Identity = 61/153 (39.87%), Postives = 86/153 (56.21%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-----SHAALAMKKSIGESFKSSEQRSEFS 448
            E    L  AT+DSL+I DE+GRGTST+DG A+A A+   + E  + + LF+THYH LT    + P +   H+A        N  KG  EL+FL+++  GA  +SYG+QVA +A +P+KV+  A        A A KKS   + K  E   E +
Sbjct:  664 EAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAA-------NEYKG--ELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFEASAGKKSSISNLKMVENEPEIN 807          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_STAA2 (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain JH1) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20
Identity = 61/153 (39.87%), Postives = 86/153 (56.21%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-----SHAALAMKKSIGESFKSSEQRSEFS 448
            E    L  AT+DSL+I DE+GRGTST+DG A+A A+   + E  + + LF+THYH LT    + P +   H+A        N  KG  EL+FL+++  GA  +SYG+QVA +A +P+KV+  A        A A KKS   + K  E   E +
Sbjct:  664 EAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAA-------NEYKG--ELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFEASAGKKSSISNLKMVENEPEIN 807          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_STAA1 (DNA mismatch repair protein mutS OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20
Identity = 61/153 (39.87%), Postives = 86/153 (56.21%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-----SHAALAMKKSIGESFKSSEQRSEFS 448
            E    L  AT+DSL+I DE+GRGTST+DG A+A A+   + E  + + LF+THYH LT    + P +   H+A        N  KG  EL+FL+++  GA  +SYG+QVA +A +P+KV+  A        A A KKS   + K  E   E +
Sbjct:  664 EAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAA-------NEYKG--ELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFEASAGKKSSISNLKMVENEPEIN 807          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_RHOPS (DNA mismatch repair protein mutS OS=Rhodopseudomonas palustris (strain BisB5) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20
Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA 373
            ETA++L +AT+ +LVILDE+GRGT+TFDG +IA+A    L E+  CR LFATHYH LT   A  P +          + +    +   E+VFL+ +  G+   SYG+QVA +AG+P  VV  A
Sbjct:  733 ETATILNQATERALVILDEIGRGTATFDGLSIAWAAIEHLHEQNRCRALFATHYHELTALSAKLPRLF---------NATVRVKEWRGEVVFLHEVLPGSADRSYGIQVAKLAGLPPSVVARA 846          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_RHOP2 (DNA mismatch repair protein mutS OS=Rhodopseudomonas palustris (strain HaA2) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20
Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA 373
            ETA++L +AT+ +LVILDE+GRGT+TFDG +IA+A    L E+  CR LFATHYH LT   A  P +          + +    +   E+VFL+ +  G+   SYG+QVA +AG+P  VV  A
Sbjct:  722 ETAAILNQATERALVILDEIGRGTATFDGLSIAWAAIEHLHEQNRCRALFATHYHELTALSAKLPRLF---------NATVRVKEWRGEVVFLHEVLPGSADRSYGIQVAKLAGLPASVVARA 835          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_ACTSZ (DNA mismatch repair protein mutS OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=mutS PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20
Identity = 56/156 (35.90%), Postives = 92/156 (58.97%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLT---KEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSSEQRSEFSSLHE 460
            TE A++L +AT DSLV++DE+GRGTST+DG ++A+A    L +++    LFATHY  LT   ++FA   +V L  +            + D  + F++ +  GA  +SYGL VA +AGVPQ+V++ A      ++K   +S  + ++  +  +LH+
Sbjct:  672 TEMANILHQATADSLVLIDEIGRGTSTYDGLSLAWACAEWLAKKLRSLTLFATHYFELTVLPEQFAGTANVHLDAL------------EHDNTIAFMHAVQDGAASKSYGLAVAALAGVPQQVIKLAKQKLAQLEKLSAQS--ADQKLQDLRTLHQ 813          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MSH3_PHANO (DNA mismatch repair protein MSH3 OS=Phaeosphaeria nodorum GN=MSH3 PE=3 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20
Identity = 58/137 (42.34%), Postives = 82/137 (59.85%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGES 415
            ETA +L+ AT  SL+ILDELGRGTSTFDG AIA AV   ++  +    LF THY  L +      +  L+++  +F+        G +E+VFLY +  G    SYGL VA +A VP+KV+E A   +  +++S+G S
Sbjct:  958 ETADILRSATSRSLIILDELGRGTSTFDGVAIAEAVLDYVIRDVGALTLFITHYQHLAR-LQDRFNGELKNVHMSFEERD-----GGKEVVFLYEVAEGTSHRSYGLNVARLAKVPEKVIETAEVKSSELEESMGIS 1088          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_RALEJ (DNA mismatch repair protein mutS OS=Ralstonia eutropha (strain JMP134) GN=mutS PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.446e-20
Identity = 56/124 (45.16%), Postives = 74/124 (59.68%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA 373
            TE A++L  AT  SLV++DE+GRGTSTFDG A+A+A+ R L+       LFATHY  LT+     P     H++            GD  +VFL+ +  G   +SYGLQVA +AGVPQ V+ AA
Sbjct:  690 TEAAAILHHATPASLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRSHTLFATHYFELTQLPQEFPQAANVHLSAV--------EHGD-GIVFLHAVQDGPASQSYGLQVAQLAGVPQPVIRAA 804          
The following BLAST results are available for this feature:
BLAST of EY688710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MUTS_STAAC1.107e-2039.87DNA mismatch repair protein mutS OS=Staphylococcus... [more]
MUTS_STAA91.107e-2039.87DNA mismatch repair protein mutS OS=Staphylococcus... [more]
MUTS_STAA81.107e-2039.87DNA mismatch repair protein mutS OS=Staphylococcus... [more]
MUTS_STAA21.107e-2039.87DNA mismatch repair protein mutS OS=Staphylococcus... [more]
MUTS_STAA11.107e-2039.87DNA mismatch repair protein mutS OS=Staphylococcus... [more]
MUTS_RHOPS1.107e-2044.72DNA mismatch repair protein mutS OS=Rhodopseudomon... [more]
MUTS_RHOP21.107e-2044.72DNA mismatch repair protein mutS OS=Rhodopseudomon... [more]
MUTS_ACTSZ1.107e-2035.90DNA mismatch repair protein mutS OS=Actinobacillus... [more]
MSH3_PHANO1.107e-2042.34DNA mismatch repair protein MSH3 OS=Phaeosphaeria ... [more]
MUTS_RALEJ1.446e-2045.16DNA mismatch repair protein mutS OS=Ralstonia eutr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-F07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688710 ID=EY688710; Name=EY688710; organism=Citrus sinensis; type=EST; length=679bp
CACAGAGACGGCATCAGTTCTTCAGAAAGCCACTCAAGATTCTCTGGTAA
TTCTTGATGAACTGGGTCGAGGAACAAGCACTTTTGATGGATATGCCATT
GCCTACGCTGTATTCCGCCAACTTGTTGAAAGGATCAATTGTCGGTTGCT
ATTTGCAACACATTACCATCCACTCACAAAAGAATTTGCTTCTCATCCGC
ATGTTACTCTACAACATATGGCTTGTGCTTTCAAGTCAAACTCTGAAAAC
TATTCGAAAGGTGATCAAGAGCTGGTTTTTCTCTACCGCCTTACTTCCGG
AGCATGCCCAGAGAGCTATGGGTTGCAAGTGGCTGTAATGGCTGGGGTTC
CACAAAAGGTGGTTGAGGCAGCATCACATGCTGCTCTAGCAATGAAAAAA
TCAATAGGAGAAAGTTTCAAGTCGAGTGAACAGAGATCAGAGTTCTCAAG
TCTCCATGAAGAGTGGTTGAAGACCATTGTAAATGTCTCAAGGGTTGATT
GTAATTCCGATGATGATGATGCTTATGACACATTGTTTTGTTTGTGGCAT
GAGCTAAAGAATTCATATCAGTTGCACAACTAAAAGAGAAGGTGGCAAAG
ATAATGATTGCTACATGACTTTGCCTAATTGCCTTAATCAATTTTTCTTT
GTGTAAAAAAAAAAAAAAAAAAAAAAAAA
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