EY688710
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_CLOBM (DNA mismatch repair protein mutS OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=mutS PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.889e-20 Identity = 58/179 (32.40%), Postives = 100/179 (55.87%), Query Frame = 2 Query: 5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLV--ERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSSEQRSEFSSLHEEWLKTIVNVSRVDCNSDDDDAYDTL 535 E +++L+ AT SLV+LDE+GRGTST+DG +IA++V + + + C+ LFATHYH LTK L+ K+ S + S+ + E+VFL ++ G +SYG++VA +AG+P V+ A ++ E+ + E+ S +++++ + N + + +DTL Sbjct: 677 EVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK---------LEDNIKGVKNYSVSVSELENEIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDKEENSLNITPSKEYKS--KDYIEVSKDTLNTKNNLESEIKHDTL 844
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MSH3_EMENI (DNA mismatch repair protein msh3 OS=Emericella nidulans GN=msh3 PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.889e-20 Identity = 57/135 (42.22%), Postives = 80/135 (59.26%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSI 406 +ETA +L++AT SLVILDELGRGTST DG AIA AV +V I LF THY L+ S P L+++ F SE+ + D+++ FLY + G SYGL VA +A +P ++E A + +++ I Sbjct: 938 SETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRSIRSLTLFITHYQHLSAMVHSFPDGELRNVHMRF---SESGTGADEDITFLYEIGEGVAHRSYGLNVARLANLPAPLLEMAKQKSAELEEKI 1069
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_SHEB9 (DNA mismatch repair protein mutS OS=Shewanella baltica (strain OS195) GN=mutS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 50/126 (39.68%), Postives = 77/126 (61.11%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASH 379 TETA++L A+ SLV++DE+GRGTST+DG ++A++ L +++ LFATHY LT+ L + + + + D + F++ + GA +SYGLQVA +AGVP KV++AA H Sbjct: 679 TETANILHNASASSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQQVGAMTLFATHYFELTQ---------LPELMAGVYNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPNKVIKAAKH 795
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_PSEHT (DNA mismatch repair protein mutS OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=mutS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 61/189 (32.28%), Postives = 98/189 (51.85%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA--------SHAALAMKKSIGESFKSSEQRSEFSSLHEEWLKTIVNVSRVDCNSDDDDAYDTLFCL 544 TETA++L AT SLV++DE+GRGTST+DG ++AYA L +I+ + LFATHY LT+ P + H+ + + + + F++ + GA +S+GLQVA +AGVP+ V+ A +H ++ ++F + Q + S E T ++ N A+D L+ L Sbjct: 682 TETATILNNATAQSLVLMDEIGRGTSTYDGLSLAYATADHLASKISAKTLFATHYFELTELAEQTPGLVNVHL---------DAIEHNDTIAFMHTVLDGAASKSFGLQVAALAGVPRSVINQAKQKLKLLENHQSVTAPNIEQQAFTFNNQAQQISPSEVELQLTAIDPD----NLSPRQAHDLLYKL 857
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_OCHA4 (DNA mismatch repair protein mutS OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=mutS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 53/123 (43.09%), Postives = 75/123 (60.98%), Query Frame = 2 Query: 5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA 373 ETA++L +A + SLVILDE+GRGT+TFDG +IA+A L E+ CR LFATH+H +T L + + + D ++VFL+ + GA SYG+QVA +AG+P+ VV A Sbjct: 720 ETAAILNQAGERSLVILDEIGRGTATFDGLSIAWAAVEYLHEKNRCRALFATHFHEMT---------ALSEKLERLSNVTMRVKEWDNDVVFLHEVAKGAADRSYGVQVARLAGLPEAVVNRA 833
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_LACGA (DNA mismatch repair protein mutS OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=mutS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 67/201 (33.33%), Postives = 103/201 (51.24%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVV-EAASHAALAMKKSIGESFKSSEQRSEFSSLHEEWLKTIVNVSRVDCNSDDDDAYDTLFCLWHELKNSYQLHN*KRRWQR 601 +E LQ AT+ SLV+ DE+GRGT+T+DG A+A A+ + L +++ + LFATHYH LT TL+H+ +E K L+FL+++ G +SYG+ VA +AG+P KV+ EA + K+ GE +SEQ F T S + D+ D D + ++ K Q+ +WQ+ Sbjct: 669 SEANDALQHATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKTLFATHYHELT-----DLDQTLKHLKNIHVGATEENGK----LIFLHKILPGPADQSYGIHVAQLAGLPHKVLREATTMLKRLEKQGAGELQPASEQLDLF---------TAEEASVPAISDDEKDVLDDIQNVYLADKTPLQVMELVAQWQQ 851
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_CLOBK (DNA mismatch repair protein mutS OS=Clostridium botulinum (strain Okra / Type B1) GN=mutS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 58/179 (32.40%), Postives = 100/179 (55.87%), Query Frame = 2 Query: 5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLV--ERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSSEQRSEFSSLHEEWLKTIVNVSRVDCNSDDDDAYDTL 535 E +++L+ AT SLV+LDE+GRGTST+DG +IA++V + + + C+ LFATHYH LTK L+ K+ S + S+ + E+VFL ++ G +SYG++VA +AG+P V+ A ++ E+ + E+ S +++++ + N + + +DTL Sbjct: 677 EVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK---------LEDNIEGVKNYSVSVSELENEIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDKEENSLNITPSKEYKS--KDYIEASKDTLNTKNNLESEIKHDTL 844
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_CLOB6 (DNA mismatch repair protein mutS OS=Clostridium botulinum (strain 657 / Type Ba4) GN=mutS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 58/179 (32.40%), Postives = 100/179 (55.87%), Query Frame = 2 Query: 5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLV--ERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSSEQRSEFSSLHEEWLKTIVNVSRVDCNSDDDDAYDTL 535 E +++L+ AT SLV+LDE+GRGTST+DG +IA++V + + + C+ LFATHYH LTK L+ K+ S + S+ + E+VFL ++ G +SYG++VA +AG+P V+ A ++ E+ + E+ S +++++ + N + + +DTL Sbjct: 677 EVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTK---------LEDNIEGVKNYSVSVSELENEIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDKEENSLNITPSKEYKS--KDYIEVSKDTLNTKNNLESEIKHDTL 844
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BRUSU (DNA mismatch repair protein mutS OS=Brucella suis GN=mutS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 2 Query: 5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA 373 ETA++L +A + SLVILDE+GRGT+TFDG +IA+A L E+ CR LFATH+H +T L + + + D +++FL+ + GA SYG+QVA +AG+P+ VV A Sbjct: 720 ETAAILNQAGEHSLVILDEIGRGTATFDGLSIAWAAVEYLHEKNRCRALFATHFHEMT---------ALSEKLERLSNVTMRVKEWDNDVIFLHEVAKGAADRSYGVQVARLAGLPEAVVNRA 833
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BRUSI (DNA mismatch repair protein mutS OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=mutS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 52/123 (42.28%), Postives = 75/123 (60.98%), Query Frame = 2 Query: 5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA 373 ETA++L +A + SLVILDE+GRGT+TFDG +IA+A L E+ CR LFATH+H +T L + + + D +++FL+ + GA SYG+QVA +AG+P+ VV A Sbjct: 720 ETAAILNQAGEHSLVILDEIGRGTATFDGLSIAWAAVEYLHEKNRCRALFATHFHEMT---------ALSEKLERLSNVTMRVKEWDNDVIFLHEVAKGAADRSYGVQVARLAGLPEAVVNRA 833 The following BLAST results are available for this feature:
BLAST of EY688710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY688710 ID=EY688710; Name=EY688710; organism=Citrus sinensis; type=EST; length=679bpback to top |