EY688710
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_ACIBC (DNA mismatch repair protein mutS OS=Acinetobacter baumannii (strain ACICU) GN=mutS PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21 Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSSEQRSEFSSLHEE 463 TET+ +L AT SLV++DE+GRGTST+DG ++A+A L +R+ C LFATHY LT E S P + H+ + + L+ L+++ G +S+GLQVA +AG+P V++ A ++K + ++S Q F++L E Sbjct: 688 TETSQILHHATNQSLVLMDEVGRGTSTYDGLSLAWACVVDLTKRVKCLCLFATHYFELT-ELGSEPGIDNYHVTA---------QELNGNLILLHKVQQGPASQSHGLQVAKLAGIPANVIKEAQKRLRILEKQQQQHLQTSVQSDLFATLDSE 831
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_ACIB5 (DNA mismatch repair protein mutS OS=Acinetobacter baumannii (strain AB0057) GN=mutS PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21 Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSSEQRSEFSSLHEE 463 TET+ +L AT SLV++DE+GRGTST+DG ++A+A L +R+ C LFATHY LT E S P + H+ + + L+ L+++ G +S+GLQVA +AG+P V++ A ++K + ++S Q F++L E Sbjct: 688 TETSQILHHATNQSLVLMDEVGRGTSTYDGLSLAWACVVDLTKRVKCLCLFATHYFELT-ELGSEPGIDNYHVTA---------QELNGNLILLHKVQQGPASQSHGLQVAKLAGIPANVIKEAQKRLRILEKQQQQHLQTSVQSDLFATLDSE 831
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_ACIB3 (DNA mismatch repair protein mutS OS=Acinetobacter baumannii (strain AB307-0294) GN=mutS PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21 Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSSEQRSEFSSLHEE 463 TET+ +L AT SLV++DE+GRGTST+DG ++A+A L +R+ C LFATHY LT E S P + H+ + + L+ L+++ G +S+GLQVA +AG+P V++ A ++K + ++S Q F++L E Sbjct: 688 TETSQILHHATNQSLVLMDEVGRGTSTYDGLSLAWACVVDLTKRVKCLCLFATHYFELT-ELGSEPGIDNYHVTA---------QELNGNLILLHKVQQGPASQSHGLQVAKLAGIPANVIKEAQKRLRILEKQQQQHLQTSVQSDLFATLDSE 831
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_CHRVO (DNA mismatch repair protein mutS OS=Chromobacterium violaceum GN=mutS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.708e-21 Identity = 56/129 (43.41%), Postives = 79/129 (61.24%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVV-EAASHAA 385 TETA++L A++ SLV++DE+GRGTSTFDG A+A+A+ R L+E+ LFATHY LT +P V H++ + +VFL+ + G +SYGL VA +AGVP KV+ +A H A Sbjct: 696 TETANILNNASEHSLVLMDEVGRGTSTFDGLALAWAIARALIEKNRAYTLFATHYFELTTLAGEYPAVANVHLSAV---------EHKDRIVFLHHVEDGPASQSYGLAVAQLAGVPAKVIRDARRHLA 815
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURTA (DNA mismatch repair protein mutS OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mutS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.708e-21 Identity = 58/139 (41.73%), Postives = 81/139 (58.27%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGES 415 TE A++L AT SLV++DE+GRGTSTFDG A+A+A+ R L+ C LFATHY LT+ A P H++ + +VFL+ + G +SYGLQVA +AGVP V+ AA H A ++S ++ Sbjct: 698 TEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHG---------IVFLHAVEEGPANQSYGLQVAQLAGVPAPVIRAARKHLAHLEQQSAAQA 827
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_AZOSE (DNA mismatch repair protein mutS OS=Azoarcus sp. (strain EbN1) GN=mutS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.708e-21 Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMK 397 TE +++L AT+ SLV++DE+GRGTSTFDG A+A+A+ R L+E+ C LFATHY LT+ +P H+ ++ +VFL+ + G +SYG++VA +AG+P VV A A++ Sbjct: 700 TEASAILHGATEQSLVLMDEIGRGTSTFDGLALAFAIARHLLEKNRCLTLFATHYFELTRLNGDYPECANVHLDAVEHAH---------RIVFLHAVEDGPASQSYGIEVAALAGIPGSVVREAKRRLRALE 822
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_THIDA (DNA mismatch repair protein mutS OS=Thiobacillus denitrificans (strain ATCC 25259) GN=mutS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 57/124 (45.97%), Postives = 76/124 (61.29%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA 373 TETA++L AT DSLV+LDE+GRGTSTFDG A+A+AV R LV LFATHY LT+ + + H+ + + +LVFL+ + G +SYG+QVA +AGVP V+ AA Sbjct: 669 TETANILHSATADSLVLLDEIGRGTSTFDGLALAWAVARHLVSATRAFTLFATHYFELTQLAQEYRQLANVHL---------DAKEHGADLVFLHAVEDGPASQSYGIQVARLAGVPGPVIHAA 783
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_PROM9 (DNA mismatch repair protein mutS OS=Prochlorococcus marinus (strain MIT 9312) GN=mutS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 49/124 (39.52%), Postives = 82/124 (66.13%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA 373 +ETAS+L +AT SLV+LDE+GRGTSTFDG +IA++V L ++I C +FATHYH L + + + +++ + N++ +++F +++ G +SYG++ A +AGVP++V+E A Sbjct: 781 SETASILNQATSSSLVLLDEIGRGTSTFDGLSIAWSVSEYLAKKIKCNTIFATHYHEL--NYLKNSNKNIENFQVLVEQNND-------QIIFSHKIKKGGSNKSYGIEAAKLAGVPREVIEKA 895
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_NITOC (DNA mismatch repair protein mutS OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=mutS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 54/134 (40.30%), Postives = 80/134 (59.70%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKS 403 TETA++L AT+ SLV+LDE+GRGTSTFDG ++A+AV L ++ LFATHY LT P V H+ ++ + +VFL+ + G +SYGLQVA +AGVPQ+++ A + ++ + Sbjct: 681 TETANILHNATEHSLVLLDEVGRGTSTFDGLSLAWAVVSHLANKVRSLTLFATHYFELTTLPECLPGVVNLHLTA---------TEHKEHIVFLHAVKEGPASQSYGLQVAALAGVPQEIIAQARQQLMELENN 805
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_NITMU (DNA mismatch repair protein mutS OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=mutS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 65/171 (38.01%), Postives = 93/171 (54.39%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTK---EFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSSEQRSEFSSLHEEWLKTIVNVSRVDCN 505 TE A++L AT SLV++DE+GRGTSTFDG A+A+A+ R L+E+ LFATHY LT+ EFA +V L+ + + +VFL+ + G +SYGLQVA +AGVP V+ A L +++ E+ + Q FS W + + VD N Sbjct: 708 TEAANILHNATAQSLVLMDEVGRGTSTFDGLALAFAIARYLLEKNRSYTLFATHYFELTRLAEEFAQVANVHLRAV------------EHKHHIVFLHAVNEGPASQSYGLQVAALAGVPDPVIRTARRYLLKLEQ---EALSNQPQGDLFSRDDLFWKQDRMPEGSVDKN 863 The following BLAST results are available for this feature:
BLAST of EY688710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY688710 ID=EY688710; Name=EY688710; organism=Citrus sinensis; type=EST; length=679bpback to top |