EY688710

Overview
NameEY688710
Unique NameEY688710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_NITEU (DNA mismatch repair protein mutS OS=Nitrosomonas europaea GN=mutS PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 58/153 (37.91%), Postives = 86/153 (56.21%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSSEQRSEFSSLHE 460
            TE A +L+ AT  SLV++DE+GRGTSTFDG A+A+A+ R L+ +     LFATHY  LT+     P     H+            +  + +VFL+R+  G    SYGL VA +AGVP +V+    +AA  + +   E+   S Q++ F ++ E
Sbjct:  689 TEAAGILRNATAQSLVLVDEIGRGTSTFDGLALAFAIARHLLTQNQSYTLFATHYFELTRLAEEFPQAVNIHVTAV---------EHKRRIVFLHRIEEGPASRSYGLHVAALAGVPDRVIR---NAAKILARLEQETLSRSPQQTLFETVEE 829          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_LAWIP (DNA mismatch repair protein mutS OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=mutS PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 60/125 (48.00%), Postives = 76/125 (60.80%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLV--ERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA 373
            ETA +L++AT  SLVILDE+GRGTSTFDG A+A+AV   LV  +    R LFATHYH LT          L+       + +      + ELVFLYRL  G    SYG++VA +AGVPQ V++ A
Sbjct:  700 ETARILRQATSRSLVILDEIGRGTSTFDGLALAWAVAEDLVCKDHDGVRTLFATHYHELT---------ALEEKLTGVHTMTIAIRHWNDELVFLYRLIPGPADRSYGIEVARLAGVPQSVIQRA 815          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_DESDG (DNA mismatch repair protein mutS OS=Desulfovibrio desulfuricans (strain G20) GN=mutS PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 62/125 (49.60%), Postives = 81/125 (64.80%), Query Frame = 2
Query:    5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLV--ERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA 373
            ETA +L++AT+ SLVILDE+GRGTSTFDG A+A+AV  +L+  ++   R LFATHYH LT    + P V   +M  A K       +   E+VFL RL  G    SYG++VA +AGVPQ VV+ A
Sbjct:  700 ETARILRQATRRSLVILDEIGRGTSTFDGLALAWAVVEELMKKQQAGIRTLFATHYHELTSLEGTIPGV--HNMNIAIK-------EWGGEIVFLRRLVPGPSDRSYGVEVAKLAGVPQNVVQRA 815          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURVG (DNA mismatch repair protein mutS OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mutS PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 57/138 (41.30%), Postives = 81/138 (58.70%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGE 412
            TE A++L  AT  SLV++DE+GRGTSTFDG A+A+A+ R L+ +  C  LFATHY  LT+  +  P     H++     +          +VFL+ +  G   +SYGLQVA +AGVP  V+ AA  H A   ++S  +
Sbjct:  688 TEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAQNGCYTLFATHYFELTQLPSEFPQAANVHLSAVEHGHG---------IVFLHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKHLAYLEQQSAAQ 816          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURS3 (DNA mismatch repair protein mutS OS=Burkholderia sp. (strain 383) GN=mutS PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGE 412
            TE A++L  AT  SLV++DE+GRGTSTFDG A+A+A+ R L+    C  LFATHY  LT+  A  P     H++     +          +VFL+ +  G   +SYGLQVA +AGVP  V+ AA  H A   ++S  +
Sbjct:  687 TEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAHNACYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHG---------IVFLHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKHLAYLEQQSASQ 815          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURPS (DNA mismatch repair protein mutS OS=Burkholderia pseudomallei GN=mutS PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 58/139 (41.73%), Postives = 81/139 (58.27%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGES 415
            TE A++L  AT  SLV++DE+GRGTSTFDG A+A+A+ R L+    C  LFATHY  LT+  A  P     H++     +          +VFL+ +  G   +SYGLQVA +AGVP  V+ AA  H A   ++S  ++
Sbjct:  695 TEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHG---------IVFLHAVEEGPANQSYGLQVAQLAGVPAPVIRAARKHLAHLEQQSAAQA 824          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURP6 (DNA mismatch repair protein mutS OS=Burkholderia pseudomallei (strain 668) GN=mutS PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 58/139 (41.73%), Postives = 81/139 (58.27%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGES 415
            TE A++L  AT  SLV++DE+GRGTSTFDG A+A+A+ R L+    C  LFATHY  LT+  A  P     H++     +          +VFL+ +  G   +SYGLQVA +AGVP  V+ AA  H A   ++S  ++
Sbjct:  695 TEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHG---------IVFLHAVEEGPANQSYGLQVAQLAGVPAPVIRAARKHLAHLEQQSAAQA 824          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURMS (DNA mismatch repair protein mutS OS=Burkholderia mallei (strain SAVP1) GN=mutS PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 58/139 (41.73%), Postives = 81/139 (58.27%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGES 415
            TE A++L  AT  SLV++DE+GRGTSTFDG A+A+A+ R L+    C  LFATHY  LT+  A  P     H++     +          +VFL+ +  G   +SYGLQVA +AGVP  V+ AA  H A   ++S  ++
Sbjct:  695 TEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHG---------IVFLHAVEEGPANQSYGLQVAQLAGVPAPVIRAARKHLAHLEQQSAAQA 824          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURMA (DNA mismatch repair protein mutS OS=Burkholderia mallei GN=mutS PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 58/139 (41.73%), Postives = 81/139 (58.27%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGES 415
            TE A++L  AT  SLV++DE+GRGTSTFDG A+A+A+ R L+    C  LFATHY  LT+  A  P     H++     +          +VFL+ +  G   +SYGLQVA +AGVP  V+ AA  H A   ++S  ++
Sbjct:  695 TEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHG---------IVFLHAVEEGPANQSYGLQVAQLAGVPAPVIRAARKHLAHLEQQSAAQA 824          
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURM9 (DNA mismatch repair protein mutS OS=Burkholderia mallei (strain NCTC 10229) GN=mutS PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 58/139 (41.73%), Postives = 81/139 (58.27%), Query Frame = 2
Query:    2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGES 415
            TE A++L  AT  SLV++DE+GRGTSTFDG A+A+A+ R L+    C  LFATHY  LT+  A  P     H++     +          +VFL+ +  G   +SYGLQVA +AGVP  V+ AA  H A   ++S  ++
Sbjct:  695 TEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHG---------IVFLHAVEEGPANQSYGLQVAQLAGVPAPVIRAARKHLAHLEQQSAAQA 824          
The following BLAST results are available for this feature:
BLAST of EY688710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MUTS_NITEU2.231e-2137.91DNA mismatch repair protein mutS OS=Nitrosomonas e... [more]
MUTS_LAWIP2.231e-2148.00DNA mismatch repair protein mutS OS=Lawsonia intra... [more]
MUTS_DESDG2.231e-2149.60DNA mismatch repair protein mutS OS=Desulfovibrio ... [more]
MUTS_BURVG2.231e-2141.30DNA mismatch repair protein mutS OS=Burkholderia v... [more]
MUTS_BURS32.231e-2142.03DNA mismatch repair protein mutS OS=Burkholderia s... [more]
MUTS_BURPS2.231e-2141.73DNA mismatch repair protein mutS OS=Burkholderia p... [more]
MUTS_BURP62.231e-2141.73DNA mismatch repair protein mutS OS=Burkholderia p... [more]
MUTS_BURMS2.231e-2141.73DNA mismatch repair protein mutS OS=Burkholderia m... [more]
MUTS_BURMA2.231e-2141.73DNA mismatch repair protein mutS OS=Burkholderia m... [more]
MUTS_BURM92.231e-2141.73DNA mismatch repair protein mutS OS=Burkholderia m... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-F07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688710 ID=EY688710; Name=EY688710; organism=Citrus sinensis; type=EST; length=679bp
CACAGAGACGGCATCAGTTCTTCAGAAAGCCACTCAAGATTCTCTGGTAA
TTCTTGATGAACTGGGTCGAGGAACAAGCACTTTTGATGGATATGCCATT
GCCTACGCTGTATTCCGCCAACTTGTTGAAAGGATCAATTGTCGGTTGCT
ATTTGCAACACATTACCATCCACTCACAAAAGAATTTGCTTCTCATCCGC
ATGTTACTCTACAACATATGGCTTGTGCTTTCAAGTCAAACTCTGAAAAC
TATTCGAAAGGTGATCAAGAGCTGGTTTTTCTCTACCGCCTTACTTCCGG
AGCATGCCCAGAGAGCTATGGGTTGCAAGTGGCTGTAATGGCTGGGGTTC
CACAAAAGGTGGTTGAGGCAGCATCACATGCTGCTCTAGCAATGAAAAAA
TCAATAGGAGAAAGTTTCAAGTCGAGTGAACAGAGATCAGAGTTCTCAAG
TCTCCATGAAGAGTGGTTGAAGACCATTGTAAATGTCTCAAGGGTTGATT
GTAATTCCGATGATGATGATGCTTATGACACATTGTTTTGTTTGTGGCAT
GAGCTAAAGAATTCATATCAGTTGCACAACTAAAAGAGAAGGTGGCAAAG
ATAATGATTGCTACATGACTTTGCCTAATTGCCTTAATCAATTTTTCTTT
GTGTAAAAAAAAAAAAAAAAAAAAAAAAA
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