EY688710
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURM7 (DNA mismatch repair protein mutS OS=Burkholderia mallei (strain NCTC 10247) GN=mutS PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 58/139 (41.73%), Postives = 81/139 (58.27%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGES 415 TE A++L AT SLV++DE+GRGTSTFDG A+A+A+ R L+ C LFATHY LT+ A P H++ + +VFL+ + G +SYGLQVA +AGVP V+ AA H A ++S ++ Sbjct: 695 TEAAAILNDATPHSLVLMDEIGRGTSTFDGLALAWAIARHLLSHNRCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHG---------IVFLHAVEEGPANQSYGLQVAQLAGVPAPVIRAARKHLAHLEQQSAAQA 824
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURCJ (DNA mismatch repair protein mutS OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=mutS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGE 412 TE A++L AT SLV++DE+GRGTSTFDG A+A+A+ R L+ C LFATHY LT+ A P H++ + +VFL+ + G +SYGLQVA +AGVP V+ AA H A ++S + Sbjct: 687 TEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAHNACYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHG---------IVFLHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKHLAYLEQQSASQ 815
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURCH (DNA mismatch repair protein mutS OS=Burkholderia cenocepacia (strain HI2424) GN=mutS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGE 412 TE A++L AT SLV++DE+GRGTSTFDG A+A+A+ R L+ C LFATHY LT+ A P H++ + +VFL+ + G +SYGLQVA +AGVP V+ AA H A ++S + Sbjct: 687 TEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAHNACYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHG---------IVFLHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKHLAYLEQQSASQ 815
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURCC (DNA mismatch repair protein mutS OS=Burkholderia cenocepacia (strain MC0-3) GN=mutS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGE 412 TE A++L AT SLV++DE+GRGTSTFDG A+A+A+ R L+ C LFATHY LT+ A P H++ + +VFL+ + G +SYGLQVA +AGVP V+ AA H A ++S + Sbjct: 687 TEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAHNACYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHG---------IVFLHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKHLAYLEQQSASQ 815
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_BURCA (DNA mismatch repair protein mutS OS=Burkholderia cenocepacia (strain AU 1054) GN=mutS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAA-SHAALAMKKSIGE 412 TE A++L AT SLV++DE+GRGTSTFDG A+A+A+ R L+ C LFATHY LT+ A P H++ + +VFL+ + G +SYGLQVA +AGVP V+ AA H A ++S + Sbjct: 687 TEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAHNACYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHG---------IVFLHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKHLAYLEQQSASQ 815
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MSH2_BOVIN (DNA mismatch repair protein Msh2 OS=Bos taurus GN=MSH2 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = 2 Query: 5 ETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKK 400 ETAS+L+ AT+DSL+I+DELGRGTST+DG+ +A+A+ + +I +FATH+H LT P V H+ ++ L LY++ G C +S+G+ VA +A P+ V+E A AL +++ Sbjct: 731 ETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTAL---------TTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIECAKQKALELEE 853
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_TREPS (DNA mismatch repair protein mutS OS=Treponema pallidum subsp. pallidum (strain SS14) GN=mutS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.914e-21 Identity = 56/142 (39.44%), Postives = 89/142 (62.68%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSS 427 +ETA +L+ AT+DSLVI+DE+GRGT+T DG +IA AV L+ + + LFATHYH L++ +HP L+H+ + + D +VFL ++T G+C SYG+ VA +AG+P+ V+ A +++ G + ++S Sbjct: 687 SETAHILRAATRDSLVIMDEVGRGTATEDGLSIAQAVSEYLLHHVRAKTLFATHYHELSR--LAHPQ--LEHLKL-------DVLETDNTIVFLKKVTPGSCGSSYGIYVARLAGLPESVLARACELLKQLQQRAGSAPRAS 817
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_TREPA (DNA mismatch repair protein mutS OS=Treponema pallidum GN=mutS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.914e-21 Identity = 56/142 (39.44%), Postives = 89/142 (62.68%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMKKSIGESFKSS 427 +ETA +L+ AT+DSLVI+DE+GRGT+T DG +IA AV L+ + + LFATHYH L++ +HP L+H+ + + D +VFL ++T G+C SYG+ VA +AG+P+ V+ A +++ G + ++S Sbjct: 687 SETAHILRAATRDSLVIMDEVGRGTATEDGLSIAQAVSEYLLHHVRAKTLFATHYHELSR--LAHPQ--LEHLKL-------DVLETDNTIVFLKKVTPGSCGSSYGIYVARLAGLPESVLARACELLKQLQQRAGSAPRAS 817
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_SHEAM (DNA mismatch repair protein mutS OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=mutS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.914e-21 Identity = 53/132 (40.15%), Postives = 81/132 (61.36%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTKEFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASHAALAMK 397 TETA++L AT +SLV++DE+GRGTST+DG ++A++ L +++ LFATHY LT+ P V H+ + + D + F++ + GA +SYGLQVA +AGVP V++AA H L ++ Sbjct: 679 TETANILHNATANSLVLMDEIGRGTSTYDGMSLAWSAAEYLAQKLGAMTLFATHYFELTQLPEMLPGVHNVHL---------DAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPANVIKAAKHKLLQLE 801
BLAST of EY688710 vs. ExPASy Swiss-Prot
Match: MUTS_MARMS (DNA mismatch repair protein mutS OS=Marinomonas sp. (strain MWYL1) GN=mutS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.914e-21 Identity = 62/171 (36.26%), Postives = 99/171 (57.89%), Query Frame = 2 Query: 2 TETASVLQKATQDSLVILDELGRGTSTFDGYAIAYAVFRQLVERINCRLLFATHYHPLTK-----EFASHPHVTLQHMACAFKSNSENYSKGDQELVFLYRLTSGACPESYGLQVAVMAGVPQKVVEAASH--AALAMKKSIGESFKSSEQRSEFSSLHEEWLKTIVNVSR 493 TETA++L A+++SLV++DE+GRGTSTFDG ++A+A L ++ C +LFATHY LT E A++ H+T ++ + E+VFL+++ G +SYGLQVA +AGVP+ V+ A L + I K+ E ++ SS+ + + +V S+ Sbjct: 680 TETANILNNASKNSLVLMDEVGRGTSTFDGLSLAWAAVDYLANKLKCYVLFATHYFELTTLADQLENAANVHLTA--------------TEYEDEIVFLHKVHEGPASQSYGLQVAQLAGVPRDVIGHAKQKLKELEVVTGIDLDTKTIETKANSSSIKAKTKEHLVKESK 836 The following BLAST results are available for this feature:
BLAST of EY688710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY688710 ID=EY688710; Name=EY688710; organism=Citrus sinensis; type=EST; length=679bpback to top |