EY688705

Overview
NameEY688705
Unique NameEY688705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.081e-48
Identity = 96/178 (53.93%), Postives = 129/178 (72.47%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHA----------NG---ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 496
            +CKDPK CT++L G SKD+LNE+ERNL DAM V RN++ +P+L+PGGGAT++ VS  L++    + GIQ+ P+ +   A + IPRTLAQNCGV+VI+T+T L+ KHA          NG   +  W GIDG TG + DM+E  +W+ ++VK QT KTA+E+ACM+LRIDDIVSG KKK
Sbjct:  380 ECKDPKACTIILRGGSKDVLNEIERNLTDAMQVVRNVVFDPRLLPGGGATEMAVSVGLRKAGLKLEGIQQGPFLAVGDAMEVIPRTLAQNCGVSVIRTVTQLRAKHAAAYEDSETSGNGTFPKCNW-GIDGTTGKLVDMEEFGVWEPFSVKVQTIKTAVESACMILRIDDIVSGSKKK 556          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_DICDI (T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.864e-48
Identity = 90/167 (53.89%), Postives = 123/167 (73.65%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANG--ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 496
            DCK+PK CT+LL GASKD+LNEVERNL DA++VARNI+ +P+L+PGGGA ++ +S  L +KS SI G+ + PY++ A + + IP+ LAQNCG N ++ +T L+ KHA    EN   G+DG+ G I DMK+  IWD ++VK QT KTAIE+AC +LR+D I S   K+
Sbjct:  364 DCKEPKACTILLRGASKDILNEVERNLTDALNVARNIVLDPRLVPGGGAIEMALSQALSEKSKSIEGLHQLPYKALAQSLECIPKILAQNCGANTVKLLTELRAKHATNPTENYTYGVDGDNGTIVDMKQLGIWDTHSVKVQTLKTAIESACTMLRVDHIASAASKQ 530          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_YEAST (T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae GN=CCT3 PE=1 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 4.449e-47
Identity = 89/166 (53.61%), Postives = 125/166 (75.30%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 499
            +CK+PK CT++L G SKD+LNE++RNLQDAM+VARN++ +P L PGGGAT++ VS  L +K+  + GIQ+WPY++ A A + IPRTL QN G + I+ ++ L+ KHA G N   GIDG+ G I DM    IW+   +K Q+ KTAIE+AC+LLR+DDIVSG++K++
Sbjct:  370 NCKEPKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQG-NFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRKQE 534          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPG_DROME (T-complex protein 1 subunit gamma OS=Drosophila melanogaster GN=Cctgamma PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 4.604e-44
Identity = 93/169 (55.03%), Postives = 117/169 (69.23%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHA----NGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 496
            +CK+PK CT+LL GASKD+LNE ERNLQDA+ VARN++  P+L+ GGGA ++  S  L +K        K PY + A A + IPRTLAQNCG N I+ +TAL+ KHA    +G  AW GIDG +G I DM    IW+   VK QT+KTA+E A +LLRIDDIVSG KK+
Sbjct:  367 ECKEPKACTILLRGASKDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTRKQ------VKGPYTAVAHALEIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAW-GIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIVSGSKKR 528          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.139e-26
Identity = 66/186 (35.48%), Postives = 110/186 (59.14%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK-KKQAPGSRQAPSKPQIETEADAD 559
            CK+PK  T+L+ G ++ +++EVER L+DA+ V ++I+ + K+I GGGA ++ +S  L + +  + G ++   E+ A A   IPRTLA+N G++ I+T+  +   H   +   IGID   G  +DM E  + +   VK Q  K+A EAA M+LRIDD+++  K +K+  G +         + +D D
Sbjct:  366 CKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGPTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAAQKLEKEKEGEKGGGGSEDFSSSSDLD 550          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.488e-26
Identity = 60/160 (37.50%), Postives = 104/160 (65.00%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            D +D K  T++L G ++ +++E+ER ++D++ V R  + + K++PGGGA +  +S  L++ + S+ G ++   E+ A A D IPRTLA+N G++ I ++  L+ +H  GE A  G+D  TG + DM+E  + +   VK Q  ++A EAA M+LRIDD+++
Sbjct:  363 DVEDAKSVTLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPGGGAPETELSLQLREFADSVGGREQLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLRSRHDGGEFA-AGLDAYTGEVIDMEEEGVVEPLRVKTQAIESATEAAVMILRIDDVIA 521          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.943e-26
Identity = 64/185 (34.59%), Postives = 109/185 (58.92%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAPSKPQIETEADAD 559
            CK+PK  T+L+ G ++ +++EVER L+DA+ V ++I+ + K+I GGGA+++ +S  L + +  + G ++   E+ A A   IPRTLA+N G++ I+T+  +   H   +   IGID   G  +DM E  + +   VK Q  K+A EAA M+LRIDD+++  K ++     +     +    +D D
Sbjct:  366 CKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAASKLEKEKEGEKGGGSEEFSGSSDLD 549          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.538e-26
Identity = 59/169 (34.91%), Postives = 108/169 (63.91%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS--GIKKKQAP 505
            CK+PK  T+L+ G S+ +++EVER+LQDA+ V +  + + K++ GGGA ++ V+  ++  + ++ G ++   E+ A A + IPR LA+N G++ I  +  L++ H  G+  + G+D  +G ++ MKE  + +   VK Q   +A E A M+LRIDD+++  G++K++ P
Sbjct:  366 CKNPKAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGAPEIEVALKIRDWAPTLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAHEEGKTTY-GVDVFSGEVACMKERGVLEPLKVKTQAITSATEVAIMILRIDDVIAAKGLEKEKGP 533          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.330e-26
Identity = 58/169 (34.32%), Postives = 100/169 (59.17%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPG 508
            +CK PK  T+L+ G ++ ++ EV R + DA+ V    I + K++ GGGA ++ ++  L+  +  + G ++    + A A + +PRTLA+N G++ I+ +  L+ KHA G NA+ G++  TG + +M E  + +   VK Q  ++A EA  MLLRIDD+++  K     G
Sbjct:  360 ECKHPKAVTMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIELAMKLRDYAEGVSGREQLAVRAFADALEVVPRTLAENAGLDAIEMLVKLRAKHAEGNNAYYGLNVFTGDVENMTENGVVEPLRVKTQAIQSATEATEMLLRIDDVIAAEKLSGGSG 528          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.645e-26
Identity = 61/180 (33.89%), Postives = 108/180 (60.00%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS--GIKKKQAPGSRQA-PSKPQ 535
            CK+PK  T+L+ G ++ ++ E+ R ++DA+      + + K++ G GA ++ VS  L++ + S+ G ++   E+ A A + IPRTLA+N G++ I  +  L+  H  G+  + G+D +TG + DMKE  +++   VK Q   +A E A M+LRIDDI++  G++K++  G     P  P+
Sbjct:  366 CKNPKAVTILVRGGTEHVVEEIARGIEDAVRAVACAVEDGKVVVGAGAPEIEVSLKLREWAPSLGGREQLAVEAFATALEIIPRTLAENAGLDPIDVLVELKAAHEKGQK-YAGVDVDTGKVVDMKERGVFEPLRVKTQAIGSATEVAVMILRIDDIIAAKGLEKEKGGGGEGGMPEMPE 544          
The following BLAST results are available for this feature:
BLAST of EY688705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TCPG_THAWE3.081e-4853.93T-complex protein 1 subunit gamma OS=Thalassiosira... [more]
TCPG_DICDI6.864e-4853.89T-complex protein 1 subunit gamma OS=Dictyostelium... [more]
TCPG_YEAST4.449e-4753.61T-complex protein 1 subunit gamma OS=Saccharomyces... [more]
TCPG_DROME4.604e-4455.03T-complex protein 1 subunit gamma OS=Drosophila me... [more]
THS_PYRAB1.139e-2635.48Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=... [more]
THS1_HALVO1.488e-2637.50Thermosome subunit 1 OS=Halobacterium volcanii GN=... [more]
THS_PYRHO1.943e-2634.59Thermosome subunit OS=Pyrococcus horikoshii GN=ths... [more]
THSA_ARCFU2.538e-2634.91Thermosome subunit alpha OS=Archaeoglobus fulgidus... [more]
THS_METTL4.330e-2634.32Thermosome subunit OS=Methanococcus thermolithotro... [more]
THSB_ARCFU9.645e-2633.89Thermosome subunit beta OS=Archaeoglobus fulgidus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688705 ID=EY688705; Name=EY688705; organism=Citrus sinensis; type=EST; length=839bp
TGATTGCAAAGATCCAAAACCTTGTACTGTACTCTTAGAAGGTGCTAGTA
AGGATCTCCTGAATGAAGTGGAAAGGAATTTGCAGGATGCAATGTCTGTG
GCAAGAAACATAATCAATAATCCAAAACTAATACCTGGTGGTGGGGCTAC
AAAATTAACAGTGTCTGCCACTCTAAAACAAAAGAGTTCCTCAATCTAAG
GCATCCAAAAGTGGCCTTACGAATCTGCTGCTATTGCTTTTGACGCTATT
CCAAGAACTTTGGCTCAAAATTGTGGCGTTAATGTAATTCAGACTATGAC
TGCTCTGCAAAGAAAACATGCAAATGGTGAAAATGCATGGATTGGCATAG
ATGGAAACACTGGTGCAATTTCTGACATGAAAGAGGGGAAGATCTGGGAT
GCATATAATGTGAAAGCACAGACATTTAAGACAGCAATTGAAGCTGCTTG
CATGCTTCTGAGGATTGATGACATTGTCAGTGGAATTAAGAAGAAACAGG
CCCCTGGCTCACGCCAAGCTCCATCGAAGCCCCAGATTGAGACGGAGGCA
GATGCAGATAGTGAGCAAATACTCCATGATTAGACAATGTTATTGTCAAC
GACTATGCAGTTTAATTATTTGAAAAAATGTTGGTTTATTGTTCTGTTGG
CGGCCTAATGATTTTGCTGAGCTTTTCCTCCAAATTTTGTGATATTGCCC
CCATGTTTTACCCCTTGTAAAAAAATGGGGAAGCTGTGATATGCTCTGCA
AAATATATAATATATTTTTAAATCCCTGTTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAGGCCGGGCCCTTTTAAAG
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