EY688705

Overview
NameEY688705
Unique NameEY688705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPH_ENCCU (T-complex protein 1 subunit eta OS=Encephalitozoon cuniculi GN=CCT7 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.674e-17
Identity = 48/159 (30.19%), Postives = 90/159 (56.60%), Query Frame = 2
Query:   23 CTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENA-WIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 496
            CT++L G  +++L E+ R++ DA+ V R  +   K++ GGG+ ++ +S  +++KS      + +  ++   AF+ IP  LA+N G++ I T+  L+++HANG++   I IDG      DM++  I++   VK    K +  AA  ++ ID  +   K +
Sbjct:  357 CTMILRGPGQEVLEEIGRSVHDAVCVVRTALRTRKVVTGGGSVEMELSRIIREKSMKYDDKRMFVAKAVGQAFEKIPLLLARNFGLDTISTIQDLRKRHANGDSCEGISIDG----ARDMQKLGIYEPLEVKKNMVKASFSAAASIIMIDSTIMAEKSQ 511          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPW_BOVIN (T-complex protein 1 subunit zeta-2 OS=Bos taurus GN=CCT6B PE=2 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 4.798e-17
Identity = 47/159 (29.56%), Postives = 88/159 (55.35%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            DC +P+  T+L++G +K  L +++  ++D +   +N I +  ++PG GA ++ ++  L     +I G  +   ++ A A   IP+ LAQN G ++ +T+  +Q +H+N +   +GID NTG      +  +WD Y VK Q   +    A  +L +D+I+
Sbjct:  365 DCINPRSVTLLVKGPNKHTLTQIKDAVRDGLRAIKNAIEDGCVVPGAGAVEVVIAEALVTYKHTIQGRARLGVQAFADALLIIPKVLAQNSGYDLQETLVKVQAEHSNSKQP-VGIDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.798e-17
Identity = 50/148 (33.78%), Postives = 83/148 (56.08%), Query Frame = 2
Query:   32 LLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 475
            ++ GA+  +L+E ER+L DA+ V R ++    LI GGGA ++ VS T+ ++S ++ G++ + ++  A A + IP TLA+N G+N I+ +T L+ +H +GE    GI       ++  +  I     V       A E    +LRIDDI
Sbjct:  379 IVRGANNVVLDETERSLHDALCVIRCLVKERALIAGGGAPEIEVSRTIMRESRAMQGVEAFVWQEFAEALEVIPTTLAENAGLNSIKVVTELRSRHESGETN-AGISVRRSGTTNTYDEHILQPVLVSTSAITLAAECVKSILRIDDI 525          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_YARLI (T-complex protein 1 subunit delta OS=Yarrowia lipolytica GN=CCT4 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.069e-16
Identity = 55/151 (36.42%), Postives = 84/151 (55.63%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGE-NAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 475
            ++L+ GA+  +++E ER+L DA+ V R++   P L+PGGGA ++ V+  + ++S ++ G     YE  + A   IP TLA+N G+N +  +T L+ +H  GE NA I +   T   S M E  +     V       A E A  LLRIDDI
Sbjct:  376 SILVRGANDLVIDETERSLHDALCVLRSLFRVPALVPGGGACEVQVAQVIGKESRAMDGASAICYEEFSNAMLVIPTTLAENAGLNPVNVVTELRVRHEKGEVNAGISVRRGT---SIMVEEHVIQPALVTTSAITLAAECAKGLLRIDDI 523          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPZ_BOVIN (T-complex protein 1 subunit zeta OS=Bos taurus GN=CCT6A PE=2 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.396e-16
Identity = 46/158 (29.11%), Postives = 87/158 (55.06%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            C +P+  T+L++G +K  L +++  ++D +   +N I++  ++PG GA ++ ++  L +   S+ G  +   ++ A A   IP+ LAQN G ++ +T+  +Q +H+      +G+D NTG      E  IWD Y VK Q   +    A  +L +D+I+
Sbjct:  366 CNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSE-SGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIM 522          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.396e-16
Identity = 50/153 (32.68%), Postives = 83/153 (54.25%), Query Frame = 2
Query:   17 KPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 475
            K  ++L  GA+   L E ER+L DA+ V R ++    LI GGG+ ++  +  L + +  + G +     + + A + IP TLA+N G+N IQ +T L+ +HANGE    GI+   G ++++ E  +     V     + A E   M+++IDDI
Sbjct:  372 KTVSILCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQRLLEHARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHANGEKT-AGINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDDI 523          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPZ_PONAB (T-complex protein 1 subunit zeta OS=Pongo abelii GN=CCT6 PE=2 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.823e-16
Identity = 46/158 (29.11%), Postives = 87/158 (55.06%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            C +P+  T+L++G +K  L +++  ++D +   RN I++  ++PG GA ++ ++  L +   S+ G  +   ++ A A   IP+ LAQN G ++ +T+  +Q +H+      +G+D NTG      E  +WD Y VK Q   +    A  +L +D+I+
Sbjct:  366 CNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVRNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSE-SGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPW_MOUSE (T-complex protein 1 subunit zeta-2 OS=Mus musculus GN=Cct6b PE=2 SV=4)

HSP 1 Score: 86.6557 bits (213), Expect = 1.823e-16
Identity = 49/159 (30.82%), Postives = 84/159 (52.83%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            DC +P   T+L++G +K  L +++  L+D +   +N I +  ++PG GA ++ ++  L      + G  +   ++ A A   IP+ LAQN G ++ +T+  +Q KHA  +   +GID NTG      E  IWD Y VK     +    A  +L +D+I+
Sbjct:  365 DCVNPLSVTLLVKGPNKHTLIQIKDALRDGLRAVKNAIEDGCVVPGAGAVEVAIAEALVNYKHRVQGRVRLGIQAFADALLIIPKVLAQNSGYDLQETLIKIQTKHAESKEL-LGIDLNTGEPMAAAEAGIWDNYCVKKHLLHSCTVIATNILLVDEIM 522          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.381e-16
Identity = 49/165 (29.70%), Postives = 93/165 (56.36%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGE-------NAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 499
            +++L GA+   ++E+ER+L DA+ V + ++ + +++PG GA +  VS  L+  + ++   ++      A A  +IP+ LA N GV+  + +  L+  H + +       N W G+D N   ++D KE  +++    K ++ K A EAA  +LRIDD++   ++KQ
Sbjct:  371 SIILRGANDFYVDEMERSLHDALLVVKRVLESKRIVPGAGACETAVSIYLENYALTLSSREQLAIAEFARAMLSIPKQLAVNAGVDSTELVARLRSCHNSSQSKPDQAHNKWWGLDLNNQYVADCKEIGVFEPLVSKIKSLKFATEAAITILRIDDLIKLKEEKQ 535          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPZ_RABIT (T-complex protein 1 subunit zeta OS=Oryctolagus cuniculus GN=CCT6 PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.110e-16
Identity = 46/158 (29.11%), Postives = 88/158 (55.70%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            C +P+  T+L++G +K  L +++  ++D +   +N I++  ++PG GA ++ ++  L +  SS+ G  +   ++ A A   IP+ LAQN G ++ +T+  ++ +H+      +G+D NTG      E  IWD Y VK Q   +    A  +L +D+I+
Sbjct:  366 CNNPRSVTLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKYKSSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIRTEHSE-SGQLVGVDLNTGEPMVAAEVGIWDNYCVKKQLLHSCTVIATNILLVDEIM 522          
The following BLAST results are available for this feature:
BLAST of EY688705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TCPH_ENCCU3.674e-1730.19T-complex protein 1 subunit eta OS=Encephalitozoon... [more]
TCPW_BOVIN4.798e-1729.56T-complex protein 1 subunit zeta-2 OS=Bos taurus G... [more]
TCPD_ASHGO4.798e-1733.78T-complex protein 1 subunit delta OS=Ashbya gossyp... [more]
TCPD_YARLI1.069e-1636.42T-complex protein 1 subunit delta OS=Yarrowia lipo... [more]
TCPZ_BOVIN1.396e-1629.11T-complex protein 1 subunit zeta OS=Bos taurus GN=... [more]
TCPD_SCHPO1.396e-1632.68T-complex protein 1 subunit delta OS=Schizosacchar... [more]
TCPZ_PONAB1.823e-1629.11T-complex protein 1 subunit zeta OS=Pongo abelii G... [more]
TCPW_MOUSE1.823e-1630.82T-complex protein 1 subunit zeta-2 OS=Mus musculus... [more]
TCPA_SCHMA2.381e-1629.70T-complex protein 1 subunit alpha OS=Schistosoma m... [more]
TCPZ_RABIT3.110e-1629.11T-complex protein 1 subunit zeta OS=Oryctolagus cu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688705 ID=EY688705; Name=EY688705; organism=Citrus sinensis; type=EST; length=839bp
TGATTGCAAAGATCCAAAACCTTGTACTGTACTCTTAGAAGGTGCTAGTA
AGGATCTCCTGAATGAAGTGGAAAGGAATTTGCAGGATGCAATGTCTGTG
GCAAGAAACATAATCAATAATCCAAAACTAATACCTGGTGGTGGGGCTAC
AAAATTAACAGTGTCTGCCACTCTAAAACAAAAGAGTTCCTCAATCTAAG
GCATCCAAAAGTGGCCTTACGAATCTGCTGCTATTGCTTTTGACGCTATT
CCAAGAACTTTGGCTCAAAATTGTGGCGTTAATGTAATTCAGACTATGAC
TGCTCTGCAAAGAAAACATGCAAATGGTGAAAATGCATGGATTGGCATAG
ATGGAAACACTGGTGCAATTTCTGACATGAAAGAGGGGAAGATCTGGGAT
GCATATAATGTGAAAGCACAGACATTTAAGACAGCAATTGAAGCTGCTTG
CATGCTTCTGAGGATTGATGACATTGTCAGTGGAATTAAGAAGAAACAGG
CCCCTGGCTCACGCCAAGCTCCATCGAAGCCCCAGATTGAGACGGAGGCA
GATGCAGATAGTGAGCAAATACTCCATGATTAGACAATGTTATTGTCAAC
GACTATGCAGTTTAATTATTTGAAAAAATGTTGGTTTATTGTTCTGTTGG
CGGCCTAATGATTTTGCTGAGCTTTTCCTCCAAATTTTGTGATATTGCCC
CCATGTTTTACCCCTTGTAAAAAAATGGGGAAGCTGTGATATGCTCTGCA
AAATATATAATATATTTTTAAATCCCTGTTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAGGCCGGGCCCTTTTAAAG
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