EY688705

Overview
NameEY688705
Unique NameEY688705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPZ_HUMAN (T-complex protein 1 subunit zeta OS=Homo sapiens GN=CCT6A PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.062e-16
Identity = 45/158 (28.48%), Postives = 87/158 (55.06%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            C +P+  T+L++G +K  L +++  ++D +   +N I++  ++PG GA ++ ++  L +   S+ G  +   ++ A A   IP+ LAQN G ++ +T+  +Q +H+      +G+D NTG      E  +WD Y VK Q   +    A  +L +D+I+
Sbjct:  366 CNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSE-SGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPZ_CHICK (T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 5.305e-16
Identity = 48/158 (30.38%), Postives = 83/158 (52.53%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            C +P+  T+L+ G +K  L +++  ++D +   +N I +  +IPG GA ++ V+  L +   ++ G  +   ++ A A   IP+ LAQN G +  +T+  +Q +HA       G+D NTG         IWD YNVK Q   +    A  +L +D+I+
Sbjct:  365 CDNPRSVTLLIRGPNKHTLTQIKDAVRDGLRAVKNAIEDGCVIPGAGALEVAVANALVKHKPNVKGRAQLGVQAFADALLIIPKVLAQNSGYDPQETLVKVQAEHAE-SGQLTGVDLNTGEPMVAAAAGIWDNYNVKKQLLHSCTVIASNILLVDEIM 521          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.305e-16
Identity = 54/177 (30.51%), Postives = 92/177 (51.98%), Query Frame = 2
Query:    8 KDPKPCT---VLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGE-------NAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPG 508
            K PK  T   ++L GA+  +L+E+ER++ D++ V R ++ + KL+ GGGA + ++S  L+  + ++   ++      A A   IP+ LA N   +    +T L+  H+  +         W G+D   G I D KE  I +    K ++ K A EAA  +LRIDD++   K++   G
Sbjct:  368 KGPKSRTASSIILRGANDVMLDEMERSVHDSLCVVRRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTKLRAYHSKAQLIPQLQHLKWAGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIKLDKQEPLGG 544          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPQ_CAEEL (T-complex protein 1 subunit theta OS=Caenorhabditis elegans GN=Y55F3AR.3 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.182e-15
Identity = 50/179 (27.93%), Postives = 95/179 (53.07%), Query Frame = 2
Query:   17 KPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAPSKPQIETEAD 553
            K  T+++ G+S+  +++VER + DA++  + +  + KL+ G GA ++ ++  ++   +   G++++  +  A A + +P+ +A+N G+   +T+T L  +H  G+    GID       D     I+D Y  K    K A +AA  +L++D I   I  KQA G  + P  P+ + E D
Sbjct:  404 KVATIIIRGSSQSRIDDVERAVDDAVNTYKALTKDGKLLAGAGAVEIELAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAENAGMPTTETLTKLYAEHVAGKKN-AGIDIWKRETMDAVVNNIFDLYAGKRLAIKLATDAASTILKVDQI---IMSKQATGGPK-PRGPKAQDEDD 577          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPE_ENCCU (T-complex protein 1 subunit epsilon OS=Encephalitozoon cuniculi GN=CCT5 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.182e-15
Identity = 45/155 (29.03%), Postives = 90/155 (58.06%), Query Frame = 2
Query:   17 KPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            K  T+L+ GA+  ++ E +R+++DA+   RNI+ N +++ GGG+++++ S  L++ ++   G ++        A + IP  LA+N G + I   + L++     +N  +G+D       DMK+  ++DA + K + F+ A +   M+L+ID++VS
Sbjct:  374 KAVTILVRGANDLVIEEAKRSIRDALCAVRNILTNSRIVYGGGSSEMSCSLALERIATGYSGEEREAILGFGRALEEIPLCLARNSGHDPIGYSSDLRKLQMESKNFHLGVDCLGDGEQDMKKLGVFDALSSKIRQFQMATQLVTMVLKIDNVVS 528          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPB_ENCCU (T-complex protein 1 subunit beta OS=Encephalitozoon cuniculi GN=CCT2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.182e-15
Identity = 46/151 (30.46%), Postives = 87/151 (57.62%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            T++L G+SK++L+E ER++ DA+ V   I  +P++I GGG++++ ++  L + +  + G +     + + A   IP+ LA N G N      +L+ +H +G  ++ G++   G+I  MKE  + D+  +K +    A E A M+++ D IV
Sbjct:  349 TIVLCGSSKEMLDEAERSVHDALCVLAKIKEDPRVIYGGGSSEMAMAVGLNKYAMEVPGAESDAILAFSSALQQIPKILADNGGYNGESIKASLRAEHNSGRTSY-GVNVRNGSIGCMKEAGVVDSLRIKHRVVTAASETAQMIIKCDAIV 498          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPW_HUMAN (T-complex protein 1 subunit zeta-2 OS=Homo sapiens GN=CCT6B PE=1 SV=4)

HSP 1 Score: 83.5741 bits (205), Expect = 1.543e-15
Identity = 46/159 (28.93%), Postives = 85/159 (53.46%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            +C +P   T+L++G +K  L +V+  ++D +   +N I +  ++PG GA ++ ++  L    +SI G  +   ++ A A   IP+ LAQN G +  +T+  +Q +H   +   +G+D NTG      +  +WD Y VK Q   +    A  +L +D+I+
Sbjct:  365 ECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQL-VGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPQM_HUMAN (Putative T-complex protein 1 subunit theta-like 2 OS=Homo sapiens GN=CCT8L2 PE=5 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.543e-15
Identity = 51/159 (32.08%), Postives = 81/159 (50.94%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            +C      TV+L GA+   L   E+ +   +     +  +P+LIPG GAT++ ++  L  K S + G     + + A A   +P+TLA+N G+ V   M  +   H  G N  +G+ G  G I+  +EG +WD   VKAQ F+   E    L+ +D+IV
Sbjct:  366 ECTGTPALTVVLRGATTQGLRSAEQAVYHGIDAYFQLCQDPRLIPGAGATEMALAKMLSDKGSRLEGPSGPAFLAFAWALKYLPKTLAENAGLAVSDVMAEMSGVHQGG-NLLMGV-GTEGIINVAQEG-VWDTLIVKAQGFRAVAEVVLQLVTVDEIV 521          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPZ_MOUSE (T-complex protein 1 subunit zeta OS=Mus musculus GN=Cct6a PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.633e-15
Identity = 44/158 (27.85%), Postives = 87/158 (55.06%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            C +P+  T+L++G +K  L +++  ++D +   +N I++  ++PG GA ++ ++  L +   S+ G  +   ++ A A   IP+ LAQN G ++ +T+  +Q +H+      +G+D +TG      E  +WD Y VK Q   +    A  +L +D+I+
Sbjct:  366 CNNPRSVTLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVALAEALIKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSE-SGQLVGVDLSTGEPMVAAEMGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.491e-15
Identity = 48/158 (30.38%), Postives = 86/158 (54.43%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKH----ANGEN---AWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            +++L GA+  + +E+ER+L DA+ V + ++ +  ++PGGGA +  +S  L+  ++S+   ++      A +   IP TLA N   +    +  L+  H     N E     WIG+D + G   D K+  +++   VK ++ K A EAA  +LRIDD++
Sbjct:  374 SIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLI 531          
The following BLAST results are available for this feature:
BLAST of EY688705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TCPZ_HUMAN4.062e-1628.48T-complex protein 1 subunit zeta OS=Homo sapiens G... [more]
TCPZ_CHICK5.305e-1630.38T-complex protein 1 subunit zeta OS=Gallus gallus ... [more]
TCPA_CAEEL5.305e-1630.51T-complex protein 1 subunit alpha OS=Caenorhabditi... [more]
TCPQ_CAEEL1.182e-1527.93T-complex protein 1 subunit theta OS=Caenorhabditi... [more]
TCPE_ENCCU1.182e-1529.03T-complex protein 1 subunit epsilon OS=Encephalito... [more]
TCPB_ENCCU1.182e-1530.46T-complex protein 1 subunit beta OS=Encephalitozoo... [more]
TCPW_HUMAN1.543e-1528.93T-complex protein 1 subunit zeta-2 OS=Homo sapiens... [more]
TCPQM_HUMAN1.543e-1532.08Putative T-complex protein 1 subunit theta-like 2 ... [more]
TCPZ_MOUSE2.633e-1527.85T-complex protein 1 subunit zeta OS=Mus musculus G... [more]
TCPA_MACFA4.491e-1530.38T-complex protein 1 subunit alpha OS=Macaca fascic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688705 ID=EY688705; Name=EY688705; organism=Citrus sinensis; type=EST; length=839bp
TGATTGCAAAGATCCAAAACCTTGTACTGTACTCTTAGAAGGTGCTAGTA
AGGATCTCCTGAATGAAGTGGAAAGGAATTTGCAGGATGCAATGTCTGTG
GCAAGAAACATAATCAATAATCCAAAACTAATACCTGGTGGTGGGGCTAC
AAAATTAACAGTGTCTGCCACTCTAAAACAAAAGAGTTCCTCAATCTAAG
GCATCCAAAAGTGGCCTTACGAATCTGCTGCTATTGCTTTTGACGCTATT
CCAAGAACTTTGGCTCAAAATTGTGGCGTTAATGTAATTCAGACTATGAC
TGCTCTGCAAAGAAAACATGCAAATGGTGAAAATGCATGGATTGGCATAG
ATGGAAACACTGGTGCAATTTCTGACATGAAAGAGGGGAAGATCTGGGAT
GCATATAATGTGAAAGCACAGACATTTAAGACAGCAATTGAAGCTGCTTG
CATGCTTCTGAGGATTGATGACATTGTCAGTGGAATTAAGAAGAAACAGG
CCCCTGGCTCACGCCAAGCTCCATCGAAGCCCCAGATTGAGACGGAGGCA
GATGCAGATAGTGAGCAAATACTCCATGATTAGACAATGTTATTGTCAAC
GACTATGCAGTTTAATTATTTGAAAAAATGTTGGTTTATTGTTCTGTTGG
CGGCCTAATGATTTTGCTGAGCTTTTCCTCCAAATTTTGTGATATTGCCC
CCATGTTTTACCCCTTGTAAAAAAATGGGGAAGCTGTGATATGCTCTGCA
AAATATATAATATATTTTTAAATCCCTGTTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAGGCCGGGCCCTTTTAAAG
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