EY688705

Overview
NameEY688705
Unique NameEY688705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.627e-23
Identity = 58/162 (35.80%), Postives = 98/162 (60.49%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 490
            CK+PK  T+L+ G ++ +++EVER L+DA+ V ++I+ + K++  GGA ++ +S  L + +  + G ++   E+ A A   IPRTLA+N G++ I+T+  +   H   +   IG+D   G  +DM E  +     V  Q  K+A EAA M+LRIDD+++  K
Sbjct:  366 CKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASK 526          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.852e-23
Identity = 57/162 (35.19%), Postives = 98/162 (60.49%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 490
            CK+PK  T+L+ G ++ +++EVER L+DA+ V ++I+ + K++  GGA ++ ++  L + +  + G ++   E+ A A   IPRTLA+N G++ I+T+  +   H   +   IG+D   G  +DM E  +     V  Q  K+A EAA M+LRIDD+++  K
Sbjct:  366 CKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASK 526          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.981e-23
Identity = 56/164 (34.15%), Postives = 95/164 (57.93%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 496
            CK PK  T+L  G+++ ++ EV R + DA+ V +  +   K++ GGGAT++ ++  L++ + S+ G ++   ++ A A + IPRTLA+N G++ I  +  L+  H        G+D   G + DM E  + +   VK Q   +A EA+ MLLRIDD+++  K K
Sbjct:  363 CKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAESVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVK 526          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.224e-22
Identity = 53/158 (33.54%), Postives = 86/158 (54.43%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            C   K CT++L G ++  + E ER+L DA+ + R  I N  ++ GGGA ++ +S  L+  S +I G Q+    + A A + IPR L  N G +    +  L+ +HA G   W G+D NT  I+D  E  +W+   V+      A EAAC+++ +D+ +
Sbjct:  364 CPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETI 520          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.904e-22
Identity = 54/160 (33.75%), Postives = 99/160 (61.88%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            D ++ K  T++L G ++ +++EVER ++D++ V R  + + +++PGGGA +  ++  L+  + S+ G ++   E+ A A + IPRTLA+N G + I ++  L+ +H  G+    G+D   G + DM+   I +   VK Q  ++A EAA M+LRIDD+++
Sbjct:  362 DVEEAKSVTLILRGGTEHVVDEVERAIEDSLGVVRVTLEDGQVMPGGGAPETELAMQLRDFADSVGGREQLAVEAFADALEVIPRTLAENAGHDPIDSLVDLRSQHDGGDTE-AGLDAYNGDVIDMESEGIVEPLRVKTQAIESATEAATMILRIDDVIA 520          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.904e-22
Identity = 56/172 (32.56%), Postives = 89/172 (51.74%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKK--KQAPGSR 514
            C   K CT++L G ++  + E ER+L DA+ + R  I N  ++ GGGA ++ +S  L+  S +I G Q+    + A A + IPR L  N G +    +  L+ KHA G   W G+D N   I+D  E  +W+   V+      A EAAC+++ +D+ +   +      PG R
Sbjct:  364 CPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRAKHAQG-GMWYGVDVNNEDIADNFEACVWEPAIVRINALTAASEAACLIVSVDETIKNPRSTVDAPPGGR 534          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSA_SULTO (Thermosome subunit alpha OS=Sulfolobus tokodaii GN=thsA PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.793e-22
Identity = 67/185 (36.22%), Postives = 105/185 (56.76%), Query Frame = 2
Query:    8 KDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANG-ENAWIGIDGNTGAIS-DMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV------SGIKK--KQAPGSRQAPSKP 532
            K+PK   +LL G++   L+E ER++ DA+   RN++  P ++ GGGA +  ++  L++ + S+ G ++   E  A A + IP  LA+  G+  IQT+  L+ KHA G  NA  G+D   G I+ DM    + +   VKAQ  K+A+EAA  +L+IDD++      SG KK  K+  G  +  S P
Sbjct:  373 KNPKAVNILLRGSNDMALDEAERSINDALHSLRNVLMKPMIVAGGGAVETELALRLREYARSVGGKEQLAIEKFAEALEEIPMILAETAGMEPIQTLMDLRAKHAKGLINA--GVDVMNGKIADDMLALNVLEPVRVKAQVLKSAVEAATAILKIDDLIAAAPLKSGEKKGEKKEGGEEEKSSTP 555          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPE2_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.954e-22
Identity = 51/159 (32.08%), Postives = 93/159 (58.49%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            C + K  T+ + G +K ++ E +R++ DA+ VARN+I N  ++ GGG+ +++ S  ++  +    G++++   + A A DAIP  LA+N G+  I T+T ++ +H    N+  GID N    +DMKE  +++    K Q    A +   M+L+IDD+++
Sbjct:  373 CANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKENNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVIT 531          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.954e-22
Identity = 51/159 (32.08%), Postives = 93/159 (58.49%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            C + K  T+ + G +K ++ E +R++ DA+ VARN+I N  ++ GGG+ +++ S  ++  +    G++++   + A A DAIP  LA+N G+  I T+T ++ +H    N+  GID N    +DMKE  +++    K Q    A +   M+L+IDD+++
Sbjct:  373 CANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKENNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVIT 531          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.470e-22
Identity = 60/185 (32.43%), Postives = 103/185 (55.68%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAPSKPQIETEADAD 559
            CK+PK  ++L+ G ++ +++E+ER++ D++ V  + + +     GGGAT   ++  L+  +  I G Q+   E  A A + IPR LA+N G++ I  +  L+ +HA G N   GI+  TG I DM +  + +   V  Q  ++A EAA M+LRIDD+++     ++  S   P K    +E+  D
Sbjct:  364 CKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKG-NKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIA----TKSSSSSSNPPKSGSSSESSED 543          
The following BLAST results are available for this feature:
BLAST of EY688705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
THSB_THEK12.627e-2335.80Thermosome subunit beta OS=Thermococcus sp. (strai... [more]
THSB_PYRKO5.852e-2335.19Thermosome subunit beta OS=Pyrococcus kodakaraensi... [more]
THS_METJA9.981e-2334.15Thermosome subunit OS=Methanocaldococcus jannaschi... [more]
TCPH_BOVIN2.224e-2233.54T-complex protein 1 subunit eta OS=Bos taurus GN=C... [more]
THSA_HALSA2.904e-2233.75Thermosome subunit alpha OS=Halobacterium salinari... [more]
TCPH_CHICK2.904e-2232.56T-complex protein 1 subunit eta OS=Gallus gallus G... [more]
THSA_SULTO3.793e-2236.22Thermosome subunit alpha OS=Sulfolobus tokodaii GN... [more]
TCPE2_AVESA4.954e-2232.08T-complex protein 1 subunit epsilon OS=Avena sativ... [more]
TCPE1_AVESA4.954e-2232.08T-complex protein 1 subunit epsilon OS=Avena sativ... [more]
THSB_THEAC6.470e-2232.43Thermosome subunit beta OS=Thermoplasma acidophilu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688705 ID=EY688705; Name=EY688705; organism=Citrus sinensis; type=EST; length=839bp
TGATTGCAAAGATCCAAAACCTTGTACTGTACTCTTAGAAGGTGCTAGTA
AGGATCTCCTGAATGAAGTGGAAAGGAATTTGCAGGATGCAATGTCTGTG
GCAAGAAACATAATCAATAATCCAAAACTAATACCTGGTGGTGGGGCTAC
AAAATTAACAGTGTCTGCCACTCTAAAACAAAAGAGTTCCTCAATCTAAG
GCATCCAAAAGTGGCCTTACGAATCTGCTGCTATTGCTTTTGACGCTATT
CCAAGAACTTTGGCTCAAAATTGTGGCGTTAATGTAATTCAGACTATGAC
TGCTCTGCAAAGAAAACATGCAAATGGTGAAAATGCATGGATTGGCATAG
ATGGAAACACTGGTGCAATTTCTGACATGAAAGAGGGGAAGATCTGGGAT
GCATATAATGTGAAAGCACAGACATTTAAGACAGCAATTGAAGCTGCTTG
CATGCTTCTGAGGATTGATGACATTGTCAGTGGAATTAAGAAGAAACAGG
CCCCTGGCTCACGCCAAGCTCCATCGAAGCCCCAGATTGAGACGGAGGCA
GATGCAGATAGTGAGCAAATACTCCATGATTAGACAATGTTATTGTCAAC
GACTATGCAGTTTAATTATTTGAAAAAATGTTGGTTTATTGTTCTGTTGG
CGGCCTAATGATTTTGCTGAGCTTTTCCTCCAAATTTTGTGATATTGCCC
CCATGTTTTACCCCTTGTAAAAAAATGGGGAAGCTGTGATATGCTCTGCA
AAATATATAATATATTTTTAAATCCCTGTTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAGGCCGGGCCCTTTTAAAG
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