EY688705

Overview
NameEY688705
Unique NameEY688705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPH_YEAST (T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae GN=CCT7 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.104e-21
Identity = 55/173 (31.79%), Postives = 91/173 (52.60%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAP 523
            C   K CT+LL G ++ ++ EVER+L DA+ + +  + N  ++ GGGAT++ VS  L+  S +I G Q+    + A A + IPR L +N G + I+ +  L+  H+ GE  W G+   T  I D     +W+   VK     +A EA  ++L +D+ ++    + A      P
Sbjct:  368 CPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEK-WYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESANAGMMPP 539          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.104e-21
Identity = 53/172 (30.81%), Postives = 89/172 (51.74%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQA 520
            C   K CT++L G ++  + E ER+L DA+ + R  I N  ++ GGGA ++ +S  L+  S +I G Q+    + A A + IPR L  N G +    +  L+ +HA G   W G+D N   I+D  +  +W+   V+      A EAAC+++ +D+ +   +    P +  A
Sbjct:  364 CPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GMWYGVDINNENIADNFQAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDPPAPSA 534          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSA_SULAC (Thermosome subunit alpha OS=Sulfolobus acidocaldarius GN=thsA PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.441e-21
Identity = 61/181 (33.70%), Postives = 102/181 (56.35%), Query Frame = 2
Query:    8 KDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANG-ENAWIGIDGNTGAIS-DMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAPSKPQIET 544
            K+P+   +LL G++   L+E ER+L DA+   RN++  P ++ GGGA +  ++  L++ + S+ G ++   E  A A + IP  LA+  G+  IQ +  L+ +HA G  N+  GID   G I+ DM +  + +   VK+Q  K+A+EAA  +L+IDD+V+    K   G ++       ET
Sbjct:  373 KNPRAVNILLRGSNDMALDEAERSLNDALHSLRNVLMKPMIVAGGGAVESELALRLREYARSVGGKEQLAIEKFAEALEEIPMILAETAGMEPIQALMDLRARHAKGLVNS--GIDAVNGKIADDMMKINVIEPVRVKSQVLKSAVEAATAILKIDDLVAASALKTEKGKKEGGEGAGAET 551          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.882e-21
Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            C   K CT +L G ++  + E ER+L DA+ + R  I N  ++ GGGA ++ +S  L+  S +I G Q+    + A A + IPR L  N G +    +  L+ +HA G   W G+D N   I+D  E  +W+   V+      A EAAC+++ +D+ +
Sbjct:  364 CPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETI 520          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.882e-21
Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            C   K CT +L G ++  + E ER+L DA+ + R  I N  ++ GGGA ++ +S  L+  S +I G Q+    + A A + IPR L  N G +    +  L+ +HA G   W G+D N   I+D  E  +W+   V+      A EAAC+++ +D+ +
Sbjct:  364 CPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETI 520          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.459e-21
Identity = 57/182 (31.32%), Postives = 101/182 (55.49%), Query Frame = 2
Query:    8 KDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAPSKPQIETEAD 553
            K+PK  ++L+ G  + +++E ER L+DA+    ++I + + + GGGA +L ++  L++ +  I G ++   E+ A A + +   L +N G + I  +  L+  H N  N W GI+  TG + DM +  + +   VK    K A EAA ++LRIDD+++  KK ++ G     SK + + E D
Sbjct:  374 KNPKAVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVELEIAKRLRKYAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAHENEANKWYGINVFTGQVEDMWKLGVIEPAVVKMNAIKAATEAATLILRIDDLIAAGKKSESKGGE---SKSEEKKEED 552          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.459e-21
Identity = 58/176 (32.95%), Postives = 102/176 (57.95%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAPSKP 532
            CK+PK  T+L+ G ++ +++EVER L+DA+ V ++++ +  ++P GGA ++ ++ ++ + +  + G +    E+ A A   IP+TLA+N G++ ++ +  +  +H N +   IGID   G  +DM E  I     V  Q  K+A  AA M+LRIDD+++   K   P  RQ    P
Sbjct:  366 CKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAISVDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEILVKVISEHKN-KGLGIGIDVFAGEPADMLERGIIAPLRVTKQAIKSA-RAAIMILRIDDVIAA--KVSKPEGRQGAECP 537          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.211e-21
Identity = 50/152 (32.89%), Postives = 98/152 (64.47%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            T+LL G++  +++E+ER + DA+ V+   +++ +++PGGGAT++ V++ L+  + S+ G ++   E+ A + + +PR LA+N G++ I T+  L+  H N ++  IG++  +G + D  E  + +  + K Q   +A EAA ++L+IDDI+S
Sbjct:  375 TLLLRGSTDHVVDELERGVSDALDVSAQTLSDGRVLPGGGATEVEVASRLRDFADSVSGREQLAVEAFADSLELVPRVLAENAGLDSIDTLVDLRSAHENDDDEHIGLNVLSGDLEDTFEAGVVEPAHAKEQAVTSASEAANLVLKIDDIIS 526          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana GN=At1g24510 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.211e-21
Identity = 49/159 (30.82%), Postives = 91/159 (57.23%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            C + K  TV + G +K ++ E +R++ DA+ VARN+I N  ++ GGGA ++  S  +   +    G++++   + A A D++P  LA+N G+  I+T++A++ +       + GID N    +DM+E  +++    K Q    A +   M+L+IDD++S
Sbjct:  373 CANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGAAEIACSLAVDAAADKYPGVEQYAIRAFAEALDSVPMALAENSGLQPIETLSAVKSQQIKENIPFYGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 531          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPH_TETPY (T-complex protein 1 subunit eta OS=Tetrahymena pyriformis PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.477e-21
Identity = 57/169 (33.73%), Postives = 91/169 (53.85%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHA--NGENAWIGIDGN-TGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 499
            DC   K  T++L G ++  + E ER+L DA+ + R  +   K++PGGGA +L +S  L+  S    G  +    + A A + IP+T+A N G + IQ +  L++KHA  + ++   G+D N    I +  E  +W+   V+   F  A EAAC +L ID+ V   K +Q
Sbjct:  363 DCPHSKSATIILRGGAEQFIAEAERSLNDAIMIVRRCMKANKIVPGGGAIELEISRLLRLHSRKTEGKVQLVINAFAKALEVIPKTIADNAGHDSIQVLNKLRQKHALESDQSKNFGVDINAVDGIGNNFENFVWEPIIVRKNAFSAATEAACTILSIDETVRNPKSEQ 531          
The following BLAST results are available for this feature:
BLAST of EY688705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TCPH_YEAST1.104e-2131.79T-complex protein 1 subunit eta OS=Saccharomyces c... [more]
TCPH_MOUSE1.104e-2130.81T-complex protein 1 subunit eta OS=Mus musculus GN... [more]
THSA_SULAC1.441e-2133.70Thermosome subunit alpha OS=Sulfolobus acidocaldar... [more]
TCPH_PONAB1.882e-2132.91T-complex protein 1 subunit eta OS=Pongo abelii GN... [more]
TCPH_HUMAN1.882e-2132.91T-complex protein 1 subunit eta OS=Homo sapiens GN... [more]
THSB_SULTO2.459e-2131.32Thermosome subunit beta OS=Sulfolobus tokodaii GN=... [more]
THSA_THEK82.459e-2132.95Thermosome subunit alpha OS=Thermococcus sp. (stra... [more]
THSB_HALSA3.211e-2132.89Thermosome subunit beta OS=Halobacterium salinariu... [more]
TCPE_ARATH3.211e-2130.82T-complex protein 1 subunit epsilon OS=Arabidopsis... [more]
TCPH_TETPY5.477e-2133.73T-complex protein 1 subunit eta OS=Tetrahymena pyr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688705 ID=EY688705; Name=EY688705; organism=Citrus sinensis; type=EST; length=839bp
TGATTGCAAAGATCCAAAACCTTGTACTGTACTCTTAGAAGGTGCTAGTA
AGGATCTCCTGAATGAAGTGGAAAGGAATTTGCAGGATGCAATGTCTGTG
GCAAGAAACATAATCAATAATCCAAAACTAATACCTGGTGGTGGGGCTAC
AAAATTAACAGTGTCTGCCACTCTAAAACAAAAGAGTTCCTCAATCTAAG
GCATCCAAAAGTGGCCTTACGAATCTGCTGCTATTGCTTTTGACGCTATT
CCAAGAACTTTGGCTCAAAATTGTGGCGTTAATGTAATTCAGACTATGAC
TGCTCTGCAAAGAAAACATGCAAATGGTGAAAATGCATGGATTGGCATAG
ATGGAAACACTGGTGCAATTTCTGACATGAAAGAGGGGAAGATCTGGGAT
GCATATAATGTGAAAGCACAGACATTTAAGACAGCAATTGAAGCTGCTTG
CATGCTTCTGAGGATTGATGACATTGTCAGTGGAATTAAGAAGAAACAGG
CCCCTGGCTCACGCCAAGCTCCATCGAAGCCCCAGATTGAGACGGAGGCA
GATGCAGATAGTGAGCAAATACTCCATGATTAGACAATGTTATTGTCAAC
GACTATGCAGTTTAATTATTTGAAAAAATGTTGGTTTATTGTTCTGTTGG
CGGCCTAATGATTTTGCTGAGCTTTTCCTCCAAATTTTGTGATATTGCCC
CCATGTTTTACCCCTTGTAAAAAAATGGGGAAGCTGTGATATGCTCTGCA
AAATATATAATATATTTTTAAATCCCTGTTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAGGCCGGGCCCTTTTAAAG
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