EY688705

Overview
NameEY688705
Unique NameEY688705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.477e-21
Identity = 55/171 (32.16%), Postives = 89/171 (52.05%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQ 517
            C   +  T++L G  +  ++E ER+L D++ + R    +  ++ GGGA ++ VS  L+  S SI G ++    + A A + IPR +A N G +    +  L++KHA GE  W G+D     I D  E  IW+   VK  +   A EA C++L +D+ V   + +QA    Q
Sbjct:  364 CTMTQTATIILRGGGEQFIDEAERSLHDSIMIVRRARKHRSVVAGGGAIEMEVSKYLRDYSLSIEGKKQLLINAFAKALEVIPRQIADNAGFDSTDILNQLRQKHAQGEK-WFGVDIVNEGICDTYESAIWEPSLVKLNSIVAATEATCLILSVDETVQNNQAEQAQAGPQ 533          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSB_THEK8 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.342e-21
Identity = 55/162 (33.95%), Postives = 98/162 (60.49%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 490
            CK+PK  T+L+ G ++ +++EVER L+DA+ V ++I+ + K++  GGA ++ ++ ++ + +  + G ++   E+ A A   IPRTLA N G++ I+T+  +   H   +   IG+D   G  +DM E  +     V  Q  K+A +AA M+LRIDD+++  K
Sbjct:  366 CKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAISVDEYAKEVGGKEQLAIEAFAEALKVIPRTLAGNAGLDPIETLVKVIAAHKE-KGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSA-KAAIMILRIDDVIAASK 525          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.342e-21
Identity = 52/155 (33.55%), Postives = 93/155 (60.00%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 490
            ++LL G++K +L E +R++ DA+ V R ++    L+PGGGA ++ ++  L+  + +  G  ++ + + A A + IP TLA+N G++ I T+T L+  HANG +++ G++   G ++DM E  +     V A   K A E    +L+IDDIV  ++
Sbjct:  387 SILLRGSNKLVLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELRNNHANGNSSY-GVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIVMAVR 540          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.550e-20
Identity = 58/175 (33.14%), Postives = 99/175 (56.57%), Query Frame = 2
Query:    8 KDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGI----KKKQAPGSRQ 517
            K+ K   +LL G++   L+E ER++ DA+   RNI+  P ++PGGGA +L ++  L++ + S+ G ++   E+ A A + IP  LA+  G+  I  +  L+ +HA G  N  + + G    + D+    I +   VKAQ  K+A EAA  +L+IDD+++      +KK   GS++
Sbjct:  372 KNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKEQLAIEAFADALEEIPTILAETAGLEAISALMDLRARHAKGLTNTGVDVIGGK-IVDDVYALNIIEPIRVKAQVLKSATEAATAILKIDDLIAAAPLKSEKKGGEGSKE 545          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.637e-20
Identity = 52/174 (29.89%), Postives = 96/174 (55.17%), Query Frame = 2
Query:    8 KDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAPSK 529
            K+PK  ++L+ G  + +++E ER L+DA+    +++ + + I GGGA +  ++  L++ +  + G ++   E+ A A +++   L +N G + I+ +  L+  H N  N W GI+  TG I DM    + +   VK    K A EA+ ++LRIDD++S  KK +     +  S+
Sbjct:  374 KNPKAVSILIRGGLERVVDETERALRDALGTVADVVRDGRAIAGGGAVETEIAKRLRKYAPQVGGKEQLAIEAYANALESLVMILIENGGFDPIELLVKLRSAHENETNKWHGINVYTGQIQDMWSLGVIEPAVVKMNAIKAATEASTLILRIDDLISAGKKSEGKTGEKKESE 547          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.637e-20
Identity = 52/170 (30.59%), Postives = 95/170 (55.88%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGS 511
            DC +    T+ + G +K ++ E +R++ DA+ V RN+I + ++I GGG+++++    +   +  I  I+++   + A A DAIP  LA+N G+  I++++ ++      +N  +GID N    +DMK   ++D    K Q F  A +   M+L+IDDI+     K  PG+
Sbjct:  372 DCPNTNAVTIFVRGGNKMIVEEAKRSIHDALCVTRNLIRDNRVIYGGGSSEISCGLKISAMADDIASIEQYAVRAFADALDAIPLALAENSGLPSIESLSTVKAMQIKEKNPRLGIDCNHRDTNDMKAQHVFDTLPGKTQQFLLANQVVKMILKIDDII-----KMGPGA 536          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.056e-20
Identity = 57/175 (32.57%), Postives = 100/175 (57.14%), Query Frame = 2
Query:    8 KDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGI----KKKQAPGSRQ 517
            K+ K   +LL G++   L+E ER++ DA+   RNI+  P ++PGGGA +L ++  L++ + S+ G ++   E+ A A + IP  LA+  G+  I ++  L+ +HA G  N  + + G    + D+    I +   VK+Q  K+A EAA  +L+IDD+++      +KK   GS++
Sbjct:  372 KNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKEQLAIEAFADALEEIPLILAETAGLEAISSLMDLRARHAKGLSNTGVDVIGGK-IVDDVYALNIIEPIRVKSQVLKSATEAATAILKIDDLIAAAPLKSEKKGGEGSKE 545          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.056e-20
Identity = 53/176 (30.11%), Postives = 95/176 (53.98%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAPSKP 532
            C   K CT++L G +   + EVER+L DA+ + ++ + N  ++ GGGA ++ +S  L+  S +I G Q+    + A + + IPR L  N G +    +  L+ +HA GE  W G+D ++  +++  E  +W+   VK+    +A EAA ++L +D+ +   +  Q P + Q    P
Sbjct:  369 CPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEMELSKYLRDYSLTISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILNKLRMQHAKGE-MWAGVDMDSEGVANNFEKFVWEPSTVKSNAILSATEAATLILSVDETIKN-EPSQQPQAPQGALPP 542          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 6.056e-20
Identity = 54/160 (33.75%), Postives = 92/160 (57.50%), Query Frame = 2
Query:    5 CKDP-KPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            C  P K  T+++ G++K ++ E ER++ DA+ V R ++    LI GGGA ++ ++  L + S ++ G++ +   + A A + IP TLA+N G+N I T+T L+ +HA GE    GI+   G IS++ E ++     V       A E    +L+IDD+V+
Sbjct:  382 CASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-TGINVRKGGISNILEEQVVQPLLVSVSALTLATETVRSILKIDDVVN 540          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSG_SULSH (Thermosome subunit gamma OS=Sulfolobus shibatae GN=thsC PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.909e-20
Identity = 57/169 (33.73%), Postives = 99/169 (58.58%), Query Frame = 2
Query:   17 KPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANG-ENAWIGIDGNTGAISD-MKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQ 517
            K  TV+++G++  + +E ER+L DA +  RN++  P ++ GGGA +  ++  L++ +  + G ++  + + A A +     L++  G++ I  +T ++ KHANG +NA  GID     I D M E K+ D+  VK Q  K+A EAA  +L+IDD+++    KQ P  +Q
Sbjct:  363 KAVTVIIKGSNNMVTDEAERSLNDAFNSIRNLLLEPYIVAGGGAVEEELAKRLRENAGKVPGKEQLAFNAFADALEEYVSILSETAGMDPISALTEIRHKHANGLKNA--GIDIVKARIYDNMLELKVIDSLKVKEQVLKSATEAATAILKIDDMIAAAPAKQQPQPQQ 529          
The following BLAST results are available for this feature:
BLAST of EY688705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TCPH_DICDI5.477e-2132.16T-complex protein 1 subunit eta OS=Dictyostelium d... [more]
THSB_THEK89.342e-2133.95Thermosome subunit beta OS=Thermococcus sp. (strai... [more]
TCPD_CAEEL9.342e-2133.55T-complex protein 1 subunit delta OS=Caenorhabditi... [more]
THSA_SULSH3.550e-2033.14Thermosome subunit alpha OS=Sulfolobus shibatae GN... [more]
THSB_SULAC4.637e-2029.89Thermosome subunit beta OS=Sulfolobus acidocaldari... [more]
TCPE_DICDI4.637e-2030.59T-complex protein 1 subunit epsilon OS=Dictyosteli... [more]
THSA_SULSO6.056e-2032.57Thermosome subunit alpha OS=Sulfolobus solfataricu... [more]
TCPH_SCHPO6.056e-2030.11Probable T-complex protein 1 subunit eta OS=Schizo... [more]
TCPD_BOVIN6.056e-2033.75T-complex protein 1 subunit delta OS=Bos taurus GN... [more]
THSG_SULSH7.909e-2033.73Thermosome subunit gamma OS=Sulfolobus shibatae GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688705 ID=EY688705; Name=EY688705; organism=Citrus sinensis; type=EST; length=839bp
TGATTGCAAAGATCCAAAACCTTGTACTGTACTCTTAGAAGGTGCTAGTA
AGGATCTCCTGAATGAAGTGGAAAGGAATTTGCAGGATGCAATGTCTGTG
GCAAGAAACATAATCAATAATCCAAAACTAATACCTGGTGGTGGGGCTAC
AAAATTAACAGTGTCTGCCACTCTAAAACAAAAGAGTTCCTCAATCTAAG
GCATCCAAAAGTGGCCTTACGAATCTGCTGCTATTGCTTTTGACGCTATT
CCAAGAACTTTGGCTCAAAATTGTGGCGTTAATGTAATTCAGACTATGAC
TGCTCTGCAAAGAAAACATGCAAATGGTGAAAATGCATGGATTGGCATAG
ATGGAAACACTGGTGCAATTTCTGACATGAAAGAGGGGAAGATCTGGGAT
GCATATAATGTGAAAGCACAGACATTTAAGACAGCAATTGAAGCTGCTTG
CATGCTTCTGAGGATTGATGACATTGTCAGTGGAATTAAGAAGAAACAGG
CCCCTGGCTCACGCCAAGCTCCATCGAAGCCCCAGATTGAGACGGAGGCA
GATGCAGATAGTGAGCAAATACTCCATGATTAGACAATGTTATTGTCAAC
GACTATGCAGTTTAATTATTTGAAAAAATGTTGGTTTATTGTTCTGTTGG
CGGCCTAATGATTTTGCTGAGCTTTTCCTCCAAATTTTGTGATATTGCCC
CCATGTTTTACCCCTTGTAAAAAAATGGGGAAGCTGTGATATGCTCTGCA
AAATATATAATATATTTTTAAATCCCTGTTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAGGCCGGGCCCTTTTAAAG
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