EY688705

Overview
NameEY688705
Unique NameEY688705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.033e-19
Identity = 49/158 (31.01%), Postives = 94/158 (59.49%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            C + +  TV + G++K +++E +R L DA+ V RN+I + +++ GGGA +++ S  + +++  I GI ++   + A A D IP  LA+N G++ I+ +TA++ +H     A++GID      +DM++  + D    K Q    A +   M+L+++DI+
Sbjct:  379 CANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEISCSLAVTKEAEKIPGIDQYSMGAFADALDTIPLALAENSGLSSIEALTAVKARHVKENKAYLGIDCLQTGSNDMRKQFVIDPLIGKKQQLLLATQLCRMVLKVNDII 536          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.033e-19
Identity = 54/160 (33.75%), Postives = 91/160 (56.88%), Query Frame = 2
Query:    5 CKDP-KPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            C  P K  T+++ G++K ++ E ER++ DA+ V R ++    LI GGGA ++ ++  L + S ++ G++ +   + A A + IP TLA+N G+N I T+T L+ +HA GE    GI+   G IS++ E  +     V       A E    +L+IDD+V+
Sbjct:  379 CTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-TGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.033e-19
Identity = 54/160 (33.75%), Postives = 91/160 (56.88%), Query Frame = 2
Query:    5 CKDP-KPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            C  P K  T+++ G++K ++ E ER++ DA+ V R ++    LI GGGA ++ ++  L + S ++ G++ +   + A A + IP TLA+N G+N I T+T L+ +HA GE    GI+   G IS++ E  +     V       A E    +L+IDD+V+
Sbjct:  379 CTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-TGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.349e-19
Identity = 54/181 (29.83%), Postives = 99/181 (54.70%), Query Frame = 2
Query:    8 KDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV-SGIKKKQAPGSRQAPSKPQIETE 547
            K+PK  ++L+ G  + +++E ER L+DA+    ++I + + + GGGA ++ ++  L++ +  + G ++   E+ A A + +   LA+N G++ I  +  L+  H N  N W G++  TG   DM +  + +   VK    K A EA  ++LRIDDIV +G K    P  ++   K +  +E
Sbjct:  373 KNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRIDDIVAAGKKSGSEPSGKKEKDKEEKSSE 553          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.349e-19
Identity = 55/184 (29.89%), Postives = 100/184 (54.35%), Query Frame = 2
Query:    8 KDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAPSKPQIETEADAD 559
            K+PK  ++L+ G  + +++E ER L+DA+    ++I + + + GGGA ++ ++  L++ +  + G ++   E+ A A + +   LA+N G++ I  +  L+  H N  N W G++  TG   DM +  + +   VK    K A EA  ++LRIDDIV+  KK    G  +   K + E ++  D
Sbjct:  373 KNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAIKAATEAVTLVLRIDDIVAAGKK----GGSEPGGKKEKEEKSSED 552          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.349e-19
Identity = 54/160 (33.75%), Postives = 91/160 (56.88%), Query Frame = 2
Query:    5 CKDP-KPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            C  P K  T+++ G++K ++ E ER++ DA+ V R ++    LI GGGA ++ ++  L + S ++ G++ +   + A A + IP TLA+N G+N I T+T L+ +HA GE    GI+   G IS++ E  +     V       A E    +L+IDD+V+
Sbjct:  379 CASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-AGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVN 537          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4)

HSP 1 Score: 97.0561 bits (240), Expect = 1.349e-19
Identity = 54/160 (33.75%), Postives = 91/160 (56.88%), Query Frame = 2
Query:    5 CKDP-KPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            C  P K  T+++ G++K ++ E ER++ DA+ V R ++    LI GGGA ++ ++  L + S ++ G++ +   + A A + IP TLA+N G+N I T+T L+ +HA GE    GI+   G IS++ E  +     V       A E    +L+IDD+V+
Sbjct:  379 CASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-AGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVN 537          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.762e-19
Identity = 48/157 (30.57%), Postives = 90/157 (57.32%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 475
            CK+ +  T+ + G +K ++ E +R+L DA+ V RN+I + +++ GGGA +++ +  + Q++     ++++   + A A + IP  L++N G+N IQTMT ++ +     N  +GID      +DMK+  + +    K Q    A +   M+L+IDDI
Sbjct:  377 CKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDI 533          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.762e-19
Identity = 48/157 (30.57%), Postives = 90/157 (57.32%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 475
            CK+ +  T+ + G +K ++ E +R+L DA+ V RN+I + +++ GGGA +++ +  + Q++     ++++   + A A + IP  L++N G+N IQTMT ++ +     N  +GID      +DMK+  + +    K Q    A +   M+L+IDDI
Sbjct:  377 CKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDI 533          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.762e-19
Identity = 59/156 (37.82%), Postives = 90/156 (57.69%), Query Frame = 2
Query:   17 KPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGE-NAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            K  TVL  G++K +L+E ER+L DA+ V R+++    LI GGGA ++ VS  +   S ++ GI  +   + A A + IP TLA+N G++ I  +T L+ KHA GE N+  GI+   GAI+++ +  +     V       A E   MLL+IDDI +
Sbjct:  378 KTVTVLCRGSNKLVLDEAERSLHDALCVIRSLVKKKFLIAGGGAPEIEVSQQVTAFSKTLTGITSYCVRAYAEALEIIPYTLAENAGLHPISIVTELRNKHAQGEINS--GINVRKGAITNILQENVVQPLLVSTSALTLATETVVMLLKIDDIAT 531          
The following BLAST results are available for this feature:
BLAST of EY688705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TCPE_SCHPO1.033e-1931.01T-complex protein 1 subunit epsilon OS=Schizosacch... [more]
TCPD_RAT1.033e-1933.75T-complex protein 1 subunit delta OS=Rattus norveg... [more]
TCPD_MOUSE1.033e-1933.75T-complex protein 1 subunit delta OS=Mus musculus ... [more]
THSB_SULSO1.349e-1929.83Thermosome subunit beta OS=Sulfolobus solfataricus... [more]
THSB_SULSH1.349e-1929.89Thermosome subunit beta OS=Sulfolobus shibatae GN=... [more]
TCPD_PONAB1.349e-1933.75T-complex protein 1 subunit delta OS=Pongo abelii ... [more]
TCPD_HUMAN1.349e-1933.75T-complex protein 1 subunit delta OS=Homo sapiens ... [more]
TCPE_MACFA1.762e-1930.57T-complex protein 1 subunit epsilon OS=Macaca fasc... [more]
TCPE_HUMAN1.762e-1930.57T-complex protein 1 subunit epsilon OS=Homo sapien... [more]
TCPD_DICDI1.762e-1937.82T-complex protein 1 subunit delta OS=Dictyostelium... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688705 ID=EY688705; Name=EY688705; organism=Citrus sinensis; type=EST; length=839bp
TGATTGCAAAGATCCAAAACCTTGTACTGTACTCTTAGAAGGTGCTAGTA
AGGATCTCCTGAATGAAGTGGAAAGGAATTTGCAGGATGCAATGTCTGTG
GCAAGAAACATAATCAATAATCCAAAACTAATACCTGGTGGTGGGGCTAC
AAAATTAACAGTGTCTGCCACTCTAAAACAAAAGAGTTCCTCAATCTAAG
GCATCCAAAAGTGGCCTTACGAATCTGCTGCTATTGCTTTTGACGCTATT
CCAAGAACTTTGGCTCAAAATTGTGGCGTTAATGTAATTCAGACTATGAC
TGCTCTGCAAAGAAAACATGCAAATGGTGAAAATGCATGGATTGGCATAG
ATGGAAACACTGGTGCAATTTCTGACATGAAAGAGGGGAAGATCTGGGAT
GCATATAATGTGAAAGCACAGACATTTAAGACAGCAATTGAAGCTGCTTG
CATGCTTCTGAGGATTGATGACATTGTCAGTGGAATTAAGAAGAAACAGG
CCCCTGGCTCACGCCAAGCTCCATCGAAGCCCCAGATTGAGACGGAGGCA
GATGCAGATAGTGAGCAAATACTCCATGATTAGACAATGTTATTGTCAAC
GACTATGCAGTTTAATTATTTGAAAAAATGTTGGTTTATTGTTCTGTTGG
CGGCCTAATGATTTTGCTGAGCTTTTCCTCCAAATTTTGTGATATTGCCC
CCATGTTTTACCCCTTGTAAAAAAATGGGGAAGCTGTGATATGCTCTGCA
AAATATATAATATATTTTTAAATCCCTGTTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAGGCCGGGCCCTTTTAAAG
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