EY688705

Overview
NameEY688705
Unique NameEY688705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPQ_MOUSE (T-complex protein 1 subunit theta OS=Mus musculus GN=Cct8 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 3.005e-19
Identity = 48/152 (31.58%), Postives = 88/152 (57.89%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            T++L G++ +L++++ER + D ++  + +  + +L+PGGGAT++ ++  +     +  G++++  +  A AF+AIPR LA+N GV   + ++ L   H  G +N  + I+    A+ DM E  I D Y  K    K A  AA  +LR+D I+
Sbjct:  374 TIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYSVHQEGNKNVGLDIEAEVPAVKDMLEASILDTYLGKYWAIKLATNAAVTVLRVDQII 525          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.005e-19
Identity = 52/175 (29.71%), Postives = 95/175 (54.29%), Query Frame = 2
Query:    2 DCKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHA-NGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAP 523
            +C   K  T++L G +K  + EVER++ DA+ +    I N +++PG G+ ++ +S  L+  S SI   ++    S A A ++IPR L+ N G +    +  L++KH+    + W G+D   G I +  +  I++   +K     +A EAAC++L ID+ +       A G++++P
Sbjct:  365 ECLKTKSVTIILRGGAKQFIEEVERSINDAIMIVLRCITNSEIVPGAGSIEMQLSKYLRIYSRSICNKEQIVLFSFAKALESIPRHLSHNAGYDSTDILNKLRKKHSEQTSDIWYGVDCMEGDIINAYDNCIFEVTKIKRNVIYSATEAACLILSIDETIK--NPSSAAGTQRSP 537          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPE_YEAST (T-complex protein 1 subunit epsilon OS=Saccharomyces cerevisiae GN=CCT5 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 3.005e-19
Identity = 50/157 (31.85%), Postives = 93/157 (59.24%), Query Frame = 2
Query:    8 KDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            K+ K  T  + G++K +++E ER L D++ V RN++ + +++ GGGA ++T+S  + +++    GI ++ +   A A D IP TLA+N G++ I T++ L+ K    + + IG+D      +DMKE  + D +  K Q    A +   M+L+ID+++
Sbjct:  399 KETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVI 555          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.925e-19
Identity = 48/157 (30.57%), Postives = 89/157 (56.69%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 475
            CK+ +  T+ + G +K ++ E +R+L DA+ V RN+I + +++ GGGA + + +  + Q++     ++++   + A A + IP  L++N G+N IQTMT ++ +     N  +GID      +DMK+  + +    K Q    A +   M+L+IDDI
Sbjct:  377 CKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAETSCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDI 533          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPQ_PONAB (T-complex protein 1 subunit theta OS=Pongo abelii GN=CCT8 PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19
Identity = 48/152 (31.58%), Postives = 88/152 (57.89%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            T++L G++ +L++++ER + D ++  + +  + +L+PGGGAT++ ++  +     +  G++++  +  A AF+AIPR LA+N GV   + ++ L   H  G +N  + I+    A+ DM E  I D Y  K    K A  AA  +LR+D I+
Sbjct:  374 TIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQII 525          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPQ_MACFA (T-complex protein 1 subunit theta OS=Macaca fascicularis GN=CCT8 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19
Identity = 48/152 (31.58%), Postives = 88/152 (57.89%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            T++L G++ +L++++ER + D ++  + +  + +L+PGGGAT++ ++  +     +  G++++  +  A AF+AIPR LA+N GV   + ++ L   H  G +N  + I+    A+ DM E  I D Y  K    K A  AA  +LR+D I+
Sbjct:  374 TIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQII 525          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPQ_HUMAN (T-complex protein 1 subunit theta OS=Homo sapiens GN=CCT8 PE=1 SV=4)

HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19
Identity = 48/152 (31.58%), Postives = 88/152 (57.89%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            T++L G++ +L++++ER + D ++  + +  + +L+PGGGAT++ ++  +     +  G++++  +  A AF+AIPR LA+N GV   + ++ L   H  G +N  + I+    A+ DM E  I D Y  K    K A  AA  +LR+D I+
Sbjct:  374 TIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQII 525          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPQ_BOVIN (T-complex protein 1 subunit theta OS=Bos taurus GN=CCT8 PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19
Identity = 55/179 (30.73%), Postives = 97/179 (54.19%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSRQAPSKPQIETEADAD 559
            T++L G++ +L++++ER + D ++  + +  + +L+PGGGAT++ ++  +     +  G++++  +  A AF+AIPR LA+N GV   + ++ L   H  G +N  + I+    A+ DM E  + D Y  K    K A  AA  +LR+D I   I  K A G    P  P  + + D D
Sbjct:  374 TIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQI---IMAKPAGG----PKPPSGKKDWDED 545          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19
Identity = 46/157 (29.30%), Postives = 90/157 (57.32%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 475
            C + K  T+ + G +K +++E +R L DA+ V RN++ + +++ GGG+ +L  +  + +++  I GI+++ + + A A ++IP  LA+N G+  I  ++ L+ K      + +GID      +DMKE K+ +    K +    A +   M+L+IDD+
Sbjct:  376 CPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19
Identity = 54/157 (34.39%), Postives = 89/157 (56.69%), Query Frame = 2
Query:    8 KDPKPC-TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 475
            K+ KP  +++  GA++ +L+E ER++ DA+ V R ++    LI GGGA ++ VS  L  +++ + G++++ Y+  A A + IP TLA+N G+N I  +T L+ +HANGE    GI       S+  +  +     V +     A E    +LRIDDI
Sbjct:  374 KNVKPTVSIVCRGANQLVLDETERSIHDALCVVRCLVKEKALIAGGGAPEIEVSRVLMSEANKLSGVEQFVYQEFAQALEVIPTTLAENAGLNSINVVTDLRNRHANGEKN-AGISVRRSGASNTYDEHVLQPVLVSSSAITLASECVKSILRIDDI 529          
The following BLAST results are available for this feature:
BLAST of EY688705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TCPQ_MOUSE3.005e-1931.58T-complex protein 1 subunit theta OS=Mus musculus ... [more]
TCPH_PLAF73.005e-1929.71T-complex protein 1 subunit eta OS=Plasmodium falc... [more]
TCPE_YEAST3.005e-1931.85T-complex protein 1 subunit epsilon OS=Saccharomyc... [more]
TCPE_PONAB3.925e-1930.57T-complex protein 1 subunit epsilon OS=Pongo abeli... [more]
TCPQ_PONAB5.126e-1931.58T-complex protein 1 subunit theta OS=Pongo abelii ... [more]
TCPQ_MACFA5.126e-1931.58T-complex protein 1 subunit theta OS=Macaca fascic... [more]
TCPQ_HUMAN5.126e-1931.58T-complex protein 1 subunit theta OS=Homo sapiens ... [more]
TCPQ_BOVIN5.126e-1930.73T-complex protein 1 subunit theta OS=Bos taurus GN... [more]
TCPE_CAEEL5.126e-1929.30T-complex protein 1 subunit epsilon OS=Caenorhabdi... [more]
TCPD_DEBHA5.126e-1934.39T-complex protein 1 subunit delta OS=Debaryomyces ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688705 ID=EY688705; Name=EY688705; organism=Citrus sinensis; type=EST; length=839bp
TGATTGCAAAGATCCAAAACCTTGTACTGTACTCTTAGAAGGTGCTAGTA
AGGATCTCCTGAATGAAGTGGAAAGGAATTTGCAGGATGCAATGTCTGTG
GCAAGAAACATAATCAATAATCCAAAACTAATACCTGGTGGTGGGGCTAC
AAAATTAACAGTGTCTGCCACTCTAAAACAAAAGAGTTCCTCAATCTAAG
GCATCCAAAAGTGGCCTTACGAATCTGCTGCTATTGCTTTTGACGCTATT
CCAAGAACTTTGGCTCAAAATTGTGGCGTTAATGTAATTCAGACTATGAC
TGCTCTGCAAAGAAAACATGCAAATGGTGAAAATGCATGGATTGGCATAG
ATGGAAACACTGGTGCAATTTCTGACATGAAAGAGGGGAAGATCTGGGAT
GCATATAATGTGAAAGCACAGACATTTAAGACAGCAATTGAAGCTGCTTG
CATGCTTCTGAGGATTGATGACATTGTCAGTGGAATTAAGAAGAAACAGG
CCCCTGGCTCACGCCAAGCTCCATCGAAGCCCCAGATTGAGACGGAGGCA
GATGCAGATAGTGAGCAAATACTCCATGATTAGACAATGTTATTGTCAAC
GACTATGCAGTTTAATTATTTGAAAAAATGTTGGTTTATTGTTCTGTTGG
CGGCCTAATGATTTTGCTGAGCTTTTCCTCCAAATTTTGTGATATTGCCC
CCATGTTTTACCCCTTGTAAAAAAATGGGGAAGCTGTGATATGCTCTGCA
AAATATATAATATATTTTTAAATCCCTGTTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAGGCCGGGCCCTTTTAAAG
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