EY688705

Overview
NameEY688705
Unique NameEY688705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4)

HSP 1 Score: 93.2041 bits (230), Expect = 1.948e-18
Identity = 50/161 (31.06%), Postives = 89/161 (55.28%), Query Frame = 2
Query:   23 CTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 505
            CT++L GA++ +L+E ER+L DA+ V    + + + + GGG +++ ++  + Q ++   G +    ES A A   +P  +A N G +    +  L+  H+ G N   G+D   G I DM    I +++ VK Q   +A EAA ++LR+D+I+    +K+ P
Sbjct:  371 CTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEG-NTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18
Identity = 47/152 (30.92%), Postives = 95/152 (62.50%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            T+LL G++  +++E+ER +QDA+ V  + + + +++ GGGA ++ +++ L+  + S+ G ++   E+ A A + +PR LA+N G++ I T+  L+  H +G+    G++  TG + D  +  + +  + K Q   +A EAA ++L+IDDI++
Sbjct:  374 TLLLRGSTDHVVDELERGVQDALDVVASTVADGRVLAGGGAIEVELASRLRNYADSVSGREQLAVEAYADALELVPRVLAENAGLDSIDTLVDLRAAHEDGQ-VRAGLNVFTGEVEDAFDAGVVETAHAKEQAVASASEAANLVLKIDDIIA 524          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18
Identity = 51/160 (31.87%), Postives = 91/160 (56.88%), Query Frame = 2
Query:    5 CKDP-KPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            C  P K  ++++ G++K ++ E ER++ DA+ V R ++    LI GGGA ++ ++  L + S ++ G++ +   + + A + IP TLA+N G+N I T+T L+ +HA G+    GI+   G IS++ E  +     V       A E    +L+IDD+V+
Sbjct:  376 CASPGKTVSIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELAVRLAEYSRTLGGMEAYCVRAYSDALEVIPSTLAENAGLNPISTVTELRNRHAQGDK-MAGINVRKGGISNIMEELVVQPLLVSISALTLATETVRSILKIDDVVN 534          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.323e-18
Identity = 52/158 (32.91%), Postives = 89/158 (56.33%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 478
            CK  + CT++L GA+   L+E ER+L DA+SV        + + GGG  ++ +S  +  ++ +I G +    E+ A A   +P  LA N G +  + ++ L+    NG +   G+D N G I+DM++  I ++Y +K     +A EAA +LLR+D+I+
Sbjct:  359 CKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGIST-SGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNII 515          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.340e-18
Identity = 50/152 (32.89%), Postives = 87/152 (57.24%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 481
            ++++ G++K +L E ER+L DA+ V R ++     I GGGA ++ ++  L   + ++ G+  + + + A A + IP TLA+N G+N I T+T L+ +HA GE    GI+   GAI+D+    +     V   +   A E    +L+IDDI++
Sbjct:  380 SIVVRGSNKLVLEEAERSLHDALCVVRCLVKKRAQIAGGGAPEIEMAIQLAAHAQTLEGVDAYCFRAFANALEVIPSTLAENAGLNPIATVTELRNRHAQGEKN-AGINVRKGAITDILAENVVQPLLVSTSSITLASETVRSILKIDDIIN 530          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPZ_DICDI (T-complex protein 1 subunit zeta OS=Dictyostelium discoideum GN=cct6 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.402e-18
Identity = 52/161 (32.30%), Postives = 90/161 (55.90%), Query Frame = 2
Query:    8 KDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 490
            K+P  CTVL++G +K  + +++  L+D +   +N I +  ++PGGGA ++   A L +   +I G  K   ++ A A   +P+TLAQN G + + T+  LQ ++A G    +G+D  +G   D     I+D Y+V  Q ++++   A  LL ID+I+   K
Sbjct:  369 KNPFSCTVLIKGPTKHQIEQIKDALRDGLRAVKNTIEDKCVVPGGGAFQIAAYADLMKFKETITGRTKLGIQAFADALLVVPKTLAQNSGFDPMDTIIKLQEEYAKGH--IVGLDVESGEPMDPVSEGIFDQYSVLKQVYRSSPVIASQLLLIDEIIKAGK 527          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.402e-18
Identity = 53/150 (35.33%), Postives = 84/150 (56.00%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 475
            +V++ GA+  +++E ER+L DA+ V R ++    LI GGGA ++ +S  L +++ S+ G+Q + ++  A A + IP TLA+N G+N I+ +T L+ KH NGE    GI       ++  E  I     V       A E    +LRIDDI
Sbjct:  376 SVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGE-LNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 524          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.402e-18
Identity = 52/150 (34.67%), Postives = 85/150 (56.67%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 475
            +V++ GA+  +L+E ER+L DA+ V R ++    LI GGGA ++ VS  L +++ ++ G++ + ++  A A + IP TLA+N G+N +  +T L+ +H NGE+   GI       S+  E  I     V     + A E    +LRIDDI
Sbjct:  378 SVVIRGANNMVLDETERSLHDALCVIRCLVKERALIAGGGAPEIEVSYRLMKEARTMEGVEAFVWQEYAEALEVIPTTLAENAGLNSLNVVTELRLRHENGESN-SGISVRRSGTSNTYEDHILQPVLVSTSAIRLASECVKSILRIDDI 526          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.668e-18
Identity = 52/150 (34.67%), Postives = 85/150 (56.67%), Query Frame = 2
Query:   26 TVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 475
            +V++ GA+  +L+E ER+L DA+ V R ++    LI GGGA ++ +S  L+++S S+ G++ + ++  A A + IP TLA+N G+N I+ +T L+ +H NG+    GI       ++  E  I     V       A E    +LRIDDI
Sbjct:  377 SVIIRGANSMILDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLERESRSMEGVEAYIWQEFAQALEVIPTTLAENAGLNSIKVITELRSRHENGD-VNEGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 525          
BLAST of EY688705 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.674e-17
Identity = 41/153 (26.80%), Postives = 91/153 (59.48%), Query Frame = 2
Query:    5 CKDPKPCTVLLEGASKDLLNEVERNLQDAMSVARNIINNPKLIPGGGATKLTVSATLKQKSSSI*GIQKWPYESAAIAFDAIPRTLAQNCGVNVIQTMTALQRKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLR 463
            CK+P+  ++++ G  + L++E ER+++DA+S   + + + K+IPGGGA ++ ++  +++ ++ + G ++   E+ A A + +  TL +N G++ I  +  L+  H   +  ++ ID  TG + +M+E  + +  ++ A   K   EAA +++R
Sbjct:  350 CKNPRSVSIVIRGGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAAEIELAKHIRRLATRVGGKEQLAIEAFAKALEGLAVTLVENAGLDPIDMVMKLRAAHEREDGKYLSIDLATGDLVNMREKGVIEPVSILANAIKAGTEAATIIMR 502          
The following BLAST results are available for this feature:
BLAST of EY688705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TCPB_HUMAN1.948e-1831.06T-complex protein 1 subunit beta OS=Homo sapiens G... [more]
THS2_HALVO2.544e-1830.92Thermosome subunit 2 OS=Halobacterium volcanii GN=... [more]
TCPD_TAKRU2.544e-1831.88T-complex protein 1 subunit delta OS=Takifugu rubr... [more]
TCPB_YEAST3.323e-1832.91T-complex protein 1 subunit beta OS=Saccharomyces ... [more]
TCPD_AEDTR4.340e-1832.89T-complex protein 1 subunit delta OS=Aedes triseri... [more]
TCPZ_DICDI7.402e-1832.30T-complex protein 1 subunit zeta OS=Dictyostelium ... [more]
TCPD_YEAST7.402e-1835.33T-complex protein 1 subunit delta OS=Saccharomyces... [more]
TCPD_KLULA7.402e-1834.67T-complex protein 1 subunit delta OS=Kluyveromyces... [more]
TCPD_CANGA9.668e-1834.67T-complex protein 1 subunit delta OS=Candida glabr... [more]
THSB_DESMO3.674e-1726.80Thermosome subunit beta (Fragment) OS=Desulfurococ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-E11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688705 ID=EY688705; Name=EY688705; organism=Citrus sinensis; type=EST; length=839bp
TGATTGCAAAGATCCAAAACCTTGTACTGTACTCTTAGAAGGTGCTAGTA
AGGATCTCCTGAATGAAGTGGAAAGGAATTTGCAGGATGCAATGTCTGTG
GCAAGAAACATAATCAATAATCCAAAACTAATACCTGGTGGTGGGGCTAC
AAAATTAACAGTGTCTGCCACTCTAAAACAAAAGAGTTCCTCAATCTAAG
GCATCCAAAAGTGGCCTTACGAATCTGCTGCTATTGCTTTTGACGCTATT
CCAAGAACTTTGGCTCAAAATTGTGGCGTTAATGTAATTCAGACTATGAC
TGCTCTGCAAAGAAAACATGCAAATGGTGAAAATGCATGGATTGGCATAG
ATGGAAACACTGGTGCAATTTCTGACATGAAAGAGGGGAAGATCTGGGAT
GCATATAATGTGAAAGCACAGACATTTAAGACAGCAATTGAAGCTGCTTG
CATGCTTCTGAGGATTGATGACATTGTCAGTGGAATTAAGAAGAAACAGG
CCCCTGGCTCACGCCAAGCTCCATCGAAGCCCCAGATTGAGACGGAGGCA
GATGCAGATAGTGAGCAAATACTCCATGATTAGACAATGTTATTGTCAAC
GACTATGCAGTTTAATTATTTGAAAAAATGTTGGTTTATTGTTCTGTTGG
CGGCCTAATGATTTTGCTGAGCTTTTCCTCCAAATTTTGTGATATTGCCC
CCATGTTTTACCCCTTGTAAAAAAATGGGGAAGCTGTGATATGCTCTGCA
AAATATATAATATATTTTTAAATCCCTGTTTTAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAGGCCGGGCCCTTTTAAAG
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