EY688672

Overview
NameEY688672
Unique NameEY688672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688672 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.063e-14
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 2
Query:    5 IKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGG 193
            ++DE +  K+  ADKKK+ D  +E I WLD N LAE DEFE K KELE +CNPII+ +YQG G
Sbjct:  553 VEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAG 615          
BLAST of EY688672 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 80.8777 bits (198), Expect = 1.063e-14
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 2
Query:    5 IKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGG 193
            ++DE +  K+  ADKKK+ D  +E I WLD N LAE DEFE K KELE +CNPII+ +YQG G
Sbjct:  553 VEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAG 615          
BLAST of EY688672 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.063e-14
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 2
Query:    2 TIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG-GGADAGAS 211
            T++DEK+  K+   DK+K+ D  +E I  LD NQ+AE +E+E K KELE +CNPI+ K+YQG GGA AG S
Sbjct:  555 TVEDEKLKGKISDQDKQKVLDKCQEVISSLDRNQMAEKEEYEHKQKELEKLCNPIVTKLYQGAGGAGAGGS 625          
BLAST of EY688672 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.063e-14
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 2
Query:    5 IKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGG 193
            ++DE +  K+  ADKKK+ D  +E I WLD N LAE DEFE K KELE +CNPII+ +YQG G
Sbjct:  553 VEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAG 615          
BLAST of EY688672 vs. ExPASy Swiss-Prot
Match: BIP3_TOBAC (Luminal-binding protein 3 (Fragment) OS=Nicotiana tabacum GN=BIP3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.388e-14
Identity = 35/71 (49.30%), Postives = 55/71 (77.46%), Query Frame = 2
Query:   14 EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAGASMDED 223
            +K++ KL + +K+KIE A++EA++WLD NQ AE +++E+K+KE+E +CNPII  +YQ  GGA  G+S  E+
Sbjct:   92 DKLADKLESDEKEKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGASGGSSSSEE 162          
BLAST of EY688672 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14
Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 2
Query:    2 TIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGA 208
            ++ D  +  K+  +DK+ I+ A++E I+WLD N  A  DE+EDK KELEG+ NPI+AK+YQ GGA  GA
Sbjct:  550 SLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQAGGAPGGA 618          
BLAST of EY688672 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14
Identity = 34/76 (44.74%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   14 EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ------GGGADAGASMDED 223
            +K++ KL   +K+K+E+A++EA++WLD NQ AE +++E+K+KE+E +CNPI++ +YQ      GG AD G   D D
Sbjct:  586 DKLADKLEAEEKEKVEEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIVSAVYQRSGGAPGGDADGGVDDDHD 661          
BLAST of EY688672 vs. ExPASy Swiss-Prot
Match: BIP2_MAIZE (Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14
Identity = 34/76 (44.74%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   14 EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ------GGGADAGASMDED 223
            +K++ KL   +K+K+E+A++EA++WLD NQ AE +++E+K+KE+E +CNPI++ +YQ      GG AD G   D D
Sbjct:  586 DKLADKLEAEEKEKVEEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIVSAVYQRSGGAPGGDADGGVDDDHD 661          
BLAST of EY688672 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.368e-14
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 2
Query:    5 IKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG 190
            + DE +  K+  ADKKKI +   EA+ WL+ NQLAE DEF+ K +ELE +CNPII K+YQGG
Sbjct:  555 VSDEGLKGKISDADKKKILNKCNEALSWLEANQLAEKDEFDHKRRELEQVCNPIITKLYQGG 616          
BLAST of EY688672 vs. ExPASy Swiss-Prot
Match: BIP1_TOBAC (Luminal-binding protein 1 (Fragment) OS=Nicotiana tabacum GN=BIP1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.093e-14
Identity = 36/71 (50.70%), Postives = 54/71 (76.06%), Query Frame = 2
Query:   14 EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAGASMDED 223
            +K++ KL + +K+KIE A +EA++WLD NQ AE +++E+K+KE+E ICNPII  +YQ  GGA  G S +E+
Sbjct:  213 DKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAICNPIITAVYQRSGGAPGGGSSEEE 283          
The following BLAST results are available for this feature:
BLAST of EY688672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
HSP71_PONAB1.063e-1457.14Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN1.063e-1457.14Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP70_CHICK1.063e-1453.52Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HS71A_PIG1.063e-1457.14Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
BIP3_TOBAC1.388e-1449.30Luminal-binding protein 3 (Fragment) OS=Nicotiana ... [more]
HSP71_SCHPO1.813e-1450.72Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
BIP3_MAIZE1.813e-1444.74Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
BIP2_MAIZE1.813e-1444.74Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=... [more]
HS71L_PIG2.368e-1456.45Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
BIP1_TOBAC3.093e-1450.70Luminal-binding protein 1 (Fragment) OS=Nicotiana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-B01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688672 ID=EY688672; Name=EY688672; organism=Citrus sinensis; type=EST; length=875bp
CACAATCAAGGATGAAAAGATCAGCGCAAAGCTTCCCACTGCTGACAAGA
AGAAAATTGAAGATGCCATTGAGGAGGCCATCCAATGGCTTGACGGGAAC
CAGCTCGCAGAGGCAGATGAGTTTGAAGATAAGATGAAAGAGCTGGAGGG
CATCTGCAACCCAATTATTGCCAAGATGTACCAAGGAGGTGGAGCTGATG
CTGGTGCAAGTATGGATGAGGATGGTCCTTCTGCTGGTGCTGGTAGCGGT
GCTGGCCCCAAGATTGAGGAGGTGGATTAAATTTGAGGATTTATGCTTAA
TGTTGTTTAATGATTAGGGGTTGAGTTGGGAGTGTGATCTTTTCTTCCTT
TTCCTGCTTCTGTTACATGTAAATACTGTTTCCTGGTGTATGCATAAAGA
TATTATGTTTTTAAGCAATGTCTTATTTTTCCTTCNNAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG
GGGGGCCGTTCAAAAGGATCAAAGTTTACATACCGGGGGTTGGAAGGTCA
TACCCTTTTTAAAAGGGCCCCTTAAATTCTATCCCCGGGGCGCCTTTTTT
AAAACCCCGGGGAGGGGAAAACCCCGGGGGTTACCCAATTTTATCCCCCT
TTGAACCCTTCCCCCTTTTCCCCCGCGGGGGGAAAAAAGGAAAAAGGCCC
CCCCCGAACCCCCCCTTCCCACAATTTGCCCCCCCCTTAAAGGGGGAAGG
GGGAACCCCCCCCTAGACCGGGCCCATTTAACCGGCGGGGGGGGGGGGGG
GGGGGTCCCCCACCCCTGTTGCCCC
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