EY688636

Overview
NameEY688636
Unique NameEY688636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY688636 vs. ExPASy Swiss-Prot
Match: P2C17_ORYSJ (Probable protein phosphatase 2C 17 OS=Oryza sativa subsp. japonica GN=Os02g0599150 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.155e-12
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 2
Query:   26 LPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNE-TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 289
            L  EKQ++  +PDI   ++ DD EFLVIA  G+W C+ S ++V ++ D+L+ E  +L VICE+V +  LA        +N T+ILVQFK
Sbjct:  262 LDREKQMLVCDPDILADDITDDMEFLVIASQGLWSCVDSADVVSYIHDRLSVEGAELRVICEEVVEFGLASG------ENTTVILVQFK 344          
BLAST of EY688636 vs. ExPASy Swiss-Prot
Match: P2C16_ORYSJ (Probable protein phosphatase 2C 16 OS=Oryza sativa subsp. japonica GN=Os02g0598400 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.155e-12
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 2
Query:   26 LPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNE-TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 289
            L  EKQ++  +PDI   ++ DD EFLVIA  G+W C+ S ++V ++ D+L+ E  +L VICE+V +  LA        +N T+ILVQFK
Sbjct:  246 LDREKQMLVCDPDILADDITDDMEFLVIASQGLWSCVDSADVVSYIHDRLSVEGAELRVICEEVVEFGLASG------ENTTVILVQFK 328          
BLAST of EY688636 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.050e-11
Identity = 39/90 (43.33%), Postives = 52/90 (57.78%), Query Frame = 2
Query:   23 SLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL-TNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 289
            ++P  +Q+VT  PDI    + DD EFLVIA DG+WD + +  +V FVR +L   E  L   CEK+   CL  +      DN T ILV+FK
Sbjct:  223 NMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVWDGMRNNNVVQFVRQELRPGEENLRETCEKLVGHCLHSN------DNATAILVKFK 306          
BLAST of EY688636 vs. ExPASy Swiss-Prot
Match: PP2C4_PARTE (Probable protein phosphatase 2C 4 OS=Paramecium tetraurelia GN=GSPATT00020181001 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.054e-11
Identity = 33/93 (35.48%), Postives = 57/93 (61.29%), Query Frame = 2
Query:   26 LPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNE----TKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFK 289
            L + +Q++ A PDI  +EL   D+FL++ CDG+++ L  Q+L+ F+  +L N+      L  + E + D  +AP ++ G GCDNMT +++  K
Sbjct:  207 LRSNEQLIIALPDIKKVELNQTDKFLLMGCDGVFETLDHQDLLKFINQKLGNQQITPQLLGRVAEDLLDNLIAPDTSAGTGCDNMTTLIIYLK 299          
BLAST of EY688636 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11
Identity = 33/92 (35.87%), Postives = 53/92 (57.61%), Query Frame = 2
Query:   20 PSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNA 295
            P  P E Q+V+A P+++ +   D+DEF+++A DG+WD LS  +L   V  +L     L ++C ++ D CL   +     DNMT ++V F  A
Sbjct:  235 PGRPPELQLVSAEPEVAALARQDEDEFVLLASDGVWDALSGADLAGLVTSRLRLGLDLELLCAQLLDTCLCKGS----LDNMTCMVVCFPGA 322          
BLAST of EY688636 vs. ExPASy Swiss-Prot
Match: PP2C3_PARTE (Probable protein phosphatase 2C 3 OS=Paramecium tetraurelia GN=GSPATT00031056001 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 2
Query:   26 LPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTN----ETKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFK 289
            L   +Q++ A PD+   EL   D+F+++ CDG+++ L+ QEL+  V   L N    E  LS   E + D+ LAP ++ G GCDNMT ILV  K
Sbjct:  207 LRPNEQLIIAFPDVKKTELTPQDKFILMGCDGVFETLNHQELLKHVNTTLGNSPVTENLLSKAAEDLLDQLLAPDTSQGTGCDNMTTILVYLK 299          
The following BLAST results are available for this feature:
BLAST of EY688636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
P2C17_ORYSJ6.155e-1243.82Probable protein phosphatase 2C 17 OS=Oryza sativa... [more]
P2C16_ORYSJ6.155e-1243.82Probable protein phosphatase 2C 16 OS=Oryza sativa... [more]
P2C21_ORYSJ1.050e-1143.33Probable protein phosphatase 2C 21 OS=Oryza sativa... [more]
PP2C4_PARTE3.054e-1135.48Probable protein phosphatase 2C 4 OS=Paramecium te... [more]
PPMBL_MOUSE3.989e-1135.87Probable protein phosphatase 1B-like OS=Mus muscul... [more]
PP2C3_PARTE3.989e-1140.86Probable protein phosphatase 2C 3 OS=Paramecium te... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-090-F02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688636 ID=EY688636; Name=EY688636; organism=Citrus sinensis; type=EST; length=851bp
ATGTGGAGTTCAAGCTAAACCCAGTTTGCCTGCTGAAAAACAGATTGTGA
CTGCCAATCCTGATATAAGTACTATTGAACTTTGTGATGACGATGAGTTT
CTTGTCATAGCTTGTGATGGGATTTGGGATTGCCTTTCAAGTCAAGAACT
TGTCGATTTTGTCAGGGATCAGTTAACCAACGAAACAAAACTATCAGTCA
TTTGCGAGAAAGTATTCGATCGGTGCTTGGCTCCATCAGCTGGTGGTGAA
GGATGTGACAACATGACCATGATCTTGGTTCAGTTTAAAAATGCTTCTAA
TAATGGTCCTTCTGCGGCTGAGCAGCCACCATCATCTGACCAACAATCCA
AGTTAGCCAGCAGTTCCACAGGGACTGAATCGAATTAGCTGTAGCACTCT
TTGCACTGACTAAATGGTACTCATTTTCTACTGTCTGAAACACTGGCTGA
GCTCAAGAACGCTGGTCCCTGAATTTTAATTTGAAAAACGAATCTCATGA
TTTGGATGCAAATATTTGAACCTTTTTCCTTATACTGGCGACCCACACTC
CATCACGCACCCCGGGCCCTGGGTCGGAGTCCCACACCGGCCTTGACTCC
CACACGCGGGACCACCCGGGCGCGAGCACAGCCACCCCGCGGACGCACTC
CCGCACACGCACCCCCCGGAACAGACATCCCGACCGACCTAGGCGGCACA
TACACTCCACCGCCTACAACGCCGAGCACCGCCTGCGACGCCGAACCGCC
CCGCCATCCCCCACGGCCAACCAGCAACGCGGAGACGACAGAGATAGACG
GTGCGCACAGCCGACCGCAGACGACCACTAGGACACAAAACCGCAAGAAC
A
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