EY688628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY688628 vs. ExPASy Swiss-Prot
Match: PSAD_CYAPA (Photosystem I reaction center subunit II, cyanelle OS=Cyanophora paradoxa GN=psaD PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.177e-24 Identity = 50/80 (62.50%), Postives = 65/80 (81.25%), Query Frame = 3 Query: 3 LARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 239 LARKEQC+ALG +L+ K+KI Y+ YRV+P+GEVQ+LHPKDGV+PEKVNPGR VG N R IG+N P ++KF G++ +D Sbjct: 136 LARKEQCIALGAQLKDKFKITDYKIYRVYPSGEVQFLHPKDGVFPEKVNPGRVAVGSNKRRIGQNPDPAKLKFKGQETFD 215
BLAST of EY688628 vs. ExPASy Swiss-Prot
Match: PSAD_SYNY3 (Photosystem I reaction center subunit II OS=Synechocystis sp. (strain PCC 6803) GN=psaD PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.224e-23 Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 3 Query: 3 LARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYDL 242 LARKEQCLALGT+LR+K+K K Y+ YRV+P+GEVQYLHP DGV+PEKVN GRE G R IG+N P+ +KF+GK Y++ Sbjct: 59 LARKEQCLALGTQLRTKFKPKIQDYKIYRVYPSGEVQYLHPADGVFPEKVNEGREAQGTKTRRIGQNPEPVTIKFSGKAPYEV 141
BLAST of EY688628 vs. ExPASy Swiss-Prot
Match: PSAD_CHLRE (Photosystem I reaction center subunit II, chloroplastic OS=Chlamydomonas reinhardtii GN=psaD PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.599e-23 Identity = 50/75 (66.67%), Postives = 63/75 (84.00%), Query Frame = 3 Query: 9 RKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQV 233 +KEQCLAL T+LR+K+K+ FYRVFP+G+VQYLHP DGVYPEKVN GR G QN R IG+NV+PI+VKF+G+ + Sbjct: 117 KKEQCLALTTQLRNKFKLTPCFYRVFPDGKVQYLHPADGVYPEKVNAGRVGANQNMRRIGQNVNPIKVKFSGRMM 191
BLAST of EY688628 vs. ExPASy Swiss-Prot
Match: PSAD_CYACA (Photosystem I reaction center subunit II OS=Cyanidium caldarium GN=psaD PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.768e-22 Identity = 48/79 (60.76%), Postives = 65/79 (82.28%), Query Frame = 3 Query: 3 LARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVY 236 LA+KEQCLALG +L+ K+KI ++ YR+FPNGE Q+LHPKDGV+PEKVN GR+ +G+ +IGKN++P EVKFT K ++ Sbjct: 62 LAKKEQCLALGNQLKIKFKILNFKIYRIFPNGEAQFLHPKDGVFPEKVNEGRKPIGKIDHNIGKNLNPAEVKFTHKTIF 140
BLAST of EY688628 vs. ExPASy Swiss-Prot
Match: PSAD_ODOSI (Photosystem I reaction center subunit II OS=Odontella sinensis GN=psaD PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.309e-22 Identity = 50/79 (63.29%), Postives = 60/79 (75.95%), Query Frame = 3 Query: 3 LARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 239 LARKEQCLALGT+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGKN +P +KF+G Y+ Sbjct: 60 LARKEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGKNPNPASIKFSGITTYE 138
BLAST of EY688628 vs. ExPASy Swiss-Prot
Match: PSAD_SKECO (Photosystem I reaction center subunit II OS=Skeletonema costatum GN=psaD PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.146e-21 Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 3 Query: 3 LARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 239 LARKEQCLAL T+LR+ Y+ YR+FP+GEVQYLHPKDGV+PEKVNPGR V SIGKN +P +KF+G Y+ Sbjct: 60 LARKEQCLALSTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGKNPNPASIKFSGITTYE 138
BLAST of EY688628 vs. ExPASy Swiss-Prot
Match: PSAD_MASLA (Photosystem I reaction center subunit II OS=Mastigocladus laminosus GN=psaD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.267e-20 Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 3 Query: 3 LARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 239 LARKEQC+ALG++LR Y+ YR++PNGE Y+HP DGV+PEKVNPGR+ V N R IG+N P ++KF+G YD Sbjct: 60 LARKEQCIALGSQLRRLKITDYKIYRIYPNGETAYIHPADGVFPEKVNPGRQKVRYNDRRIGQNPDPAKLKFSGVATYD 138
BLAST of EY688628 vs. ExPASy Swiss-Prot
Match: PSAD_SYNP6 (Photosystem I reaction center subunit II OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaD PE=1 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 3.686e-20 Identity = 49/80 (61.25%), Postives = 59/80 (73.75%), Query Frame = 3 Query: 6 ARKEQCLALGTRLRSKYKIK---YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVY 236 ARKEQ LALGT+LR+K+K K Y+ YR FP +V YLHPKDGV+PEKVN GR G+ R IG+N +P +KFTGKQ Y Sbjct: 61 ARKEQALALGTQLRTKFKPKIESYKIYRFFPGADVGYLHPKDGVFPEKVNEGRSFAGKVDRRIGQNPNPATIKFTGKQPY 140
BLAST of EY688628 vs. ExPASy Swiss-Prot
Match: PSAD_ANAVT (Photosystem I reaction center subunit II OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaD PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 5.323e-19 Identity = 47/80 (58.75%), Postives = 61/80 (76.25%), Query Frame = 3 Query: 3 LARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 239 +ARKE +ALG +LR K+KI Y+ YR+ P+GE ++HP DGV+PEKVNPGRE V N RSIG+N +P +VKF+GK YD Sbjct: 60 IARKEYGIALGGQLR-KFKITNYKIYRILPSGETTFIHPADGVFPEKVNPGREKVRFNARSIGENPNPSQVKFSGKATYD 138
BLAST of EY688628 vs. ExPASy Swiss-Prot
Match: PSAD_THEVL (Photosystem I reaction center subunit II OS=Thermosynechococcus vulcanus GN=psaD PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 9.079e-19 Identity = 46/79 (58.23%), Postives = 57/79 (72.15%), Query Frame = 3 Query: 6 ARKEQCLALGTRLRSKYKIK-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNYRSIGKNVSPIEVKFTGKQVYD 239 ARKEQCLAL + KI Y+ YR+FP+GE +HPKDGV+PEKVN GRE V RSIG+N +P ++KFTGK+ YD Sbjct: 60 ARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYD 138 The following BLAST results are available for this feature:
BLAST of EY688628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >EY688628 ID=EY688628; Name=EY688628; organism=Citrus sinensis; type=EST; length=864bpback to top |